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Bug 464782 - sci-chemistry/chemical-mime-data - Access violation ACCESS DENIED mkdir /root/.config/inkscape
Summary: sci-chemistry/chemical-mime-data - Access violation ACCESS DENIED mkdir /root...
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Jeffrey Gardner (RETIRED)
URL:
Whiteboard:
Keywords: EBUILD, PATCH
Depends on:
Blocks:
 
Reported: 2013-04-05 23:36 UTC by Karl Lindén
Modified: 2013-06-20 19:23 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
The build log (build.log,36.83 KB, text/plain)
2013-04-05 23:38 UTC, Karl Lindén
Details
An updated ebuild. (chemical-mime-data-0.1.94-r2.ebuild,999 bytes, text/plain)
2013-04-05 23:38 UTC, Karl Lindén
Details
The patch fixing the issue. (chemical-mime-data-0.1.94-rsvg-converter.patch,2.52 KB, patch)
2013-04-05 23:39 UTC, Karl Lindén
Details | Diff

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Description Karl Lindén 2013-04-05 23:36:45 UTC
When I tried to emerge sci-chemistry/chemical-mime-data I got an access violation. The access violation was somehow stuck in some infinite loop so I had to force close it. Please see attached build.log.

The violation is coming from /usr/bin/convert being called. The program can use rsvg too but it didn't help very much as it is called rsvg-convert nowadays. So I made a patch that will use one of them.

With the patch, use of the /usr/bin/convert binary can be hard disabled to use rsvg-convert instead. That solution works much better.

I'm also attaching an updated ebuild that hard disables converter and instead uses rsvg-convert It also uses autotools-utils instead of autotools.
Comment 1 Karl Lindén 2013-04-05 23:38:02 UTC
Created attachment 344566 [details]
The build log
Comment 2 Karl Lindén 2013-04-05 23:38:33 UTC
Created attachment 344568 [details]
An updated ebuild.
Comment 3 Karl Lindén 2013-04-05 23:39:04 UTC
Created attachment 344570 [details, diff]
The patch fixing the issue.
Comment 4 Karl Lindén 2013-04-05 23:40:03 UTC
Portage 2.1.11.60 (default/linux/amd64/13.0/desktop, gcc-4.7.2, glibc-2.17, 3.8.5-gentoo x86_64)
=================================================================
                        System Settings
=================================================================
System uname: Linux-3.8.5-gentoo-x86_64-AMD_Athlon-tm-_II_X4_640_Processor-with-gentoo-2.2
KiB Mem:     8181056 total,   3648704 free
KiB Swap:    2097148 total,   2097148 free
Timestamp of tree: Wed, 03 Apr 2013 17:45:01 +0000
ld GNU ld (GNU Binutils) 2.23.1
distcc 3.1 x86_64-pc-linux-gnu [disabled]
app-shells/bash:          4.2_p45
dev-java/java-config:     2.1.12-r1
dev-lang/python:          2.7.3-r3, 3.2.3-r2
dev-util/cmake:           2.8.10.2-r1
dev-util/pkgconfig:       0.28
sys-apps/baselayout:      2.2
sys-apps/openrc:          0.11.8
sys-apps/sandbox:         2.6-r1
sys-devel/autoconf:       2.13, 2.69
sys-devel/automake:       1.11.6, 1.13.1
sys-devel/binutils:       2.23.1
sys-devel/gcc:            4.7.2-r1
sys-devel/gcc-config:     1.8
sys-devel/libtool:        2.4.2
sys-devel/make:           3.82-r4
sys-kernel/linux-headers: 3.8 (virtual/os-headers)
sys-libs/glibc:           2.17
Repositories: gentoo science proaudio x-local
ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA AdobeFlash-11.x"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=amdfam10 -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=amdfam10 -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://ftp.df.lth.se/pub/gentoo/ rsync://ftp.df.lth.se/pub/gentoo/ http://mirror.mdfnet.se/gentoo"
LANG="sv_SE.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j4"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/home/kalle/overlays/science /home/kalle/overlays/proaudio /home/kalle/overlays/local"
SYNC="rsync://rsync.se.gentoo.org/gentoo-portage"
USE="3dnow 3dnowext X a52 aac acl acpi amd64 avahi berkdb branding bzip2 cairo caps cd cdda cddb cdr cli consolekit cracklib crypt cxx dbus devhelp dri dssi dts dvd dvdr emboss encode exif ffmpeg fftw firefox flac gdbm gif git gnutls gpm gstreamer gtk gtk2 gtkspell gtkstyle gudev iconv jack javascript jpeg ladish ladspa lame lash lcms libnotify libsamplerate lv2 mad mmx mng modules mp3 mp4 mpeg mudflap multilib ncurses networkmanager nls nptl ogg opengl openmp pam pango pcre pdf png policykit ppds pulseaudio qt3support qt4 readline sdl session spell sse sse2 ssl startup-notification svg svn tcpd theora tiff truetype udev udisks unicode upower usb v4l vorbis webkit wxwidgets x264 xcb xcomposite xfce xml xorg xv xvid zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" GRUB_PLATFORMS="pc" INPUT_DEVICES="evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="en en_GB de de_DE sv sv_SE" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-3" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_2" RUBY_TARGETS="ruby18 ruby19" USERLAND="GNU" VIDEO_CARDS="radeon" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON

=================================================================
                        Package Settings
=================================================================

sci-chemistry/chemical-mime-data-0.1.94-r2 was built with the following:
USE=""
Comment 5 Justin Lecher (RETIRED) gentoo-dev 2013-06-20 19:23:58 UTC
+*chemical-mime-data-0.1.94-r2 (20 Jun 2013)
+
+  20 Jun 2013; Justin Lecher <jlec@gentoo.org>
+  +chemical-mime-data-0.1.94-r2.ebuild,
+  +files/chemical-mime-data-0.1.94-namespace-svg.patch,
+  +files/chemical-mime-data-0.1.94-pigz.patch,
+  +files/chemical-mime-data-0.1.94-turbomole.patch, metadata.xml:
+  Fix for sandbox violation, #464782; Add missing deps; Bump to EAPI=5 and
+  autotools-utils eclass; fix compatibility to pigz[symlink]; call fdo-mime
+  function in pkg_postrm
+