Bug 447284 – sci-libs/scipy-0.9.0-r1: failed to merge with cblas-reference

• Status: RESOLVED FIXED
• Product: Gentoo Linux

[Description MaratIK 2012-12-14 20:32:09 UTC]

Failed to merge with reference implementation of blas, cblas and lapack

Reproducible: Always

Steps to Reproduce:
1. emerge -1 scipy

Actual Results:  
 * ERROR: sci-libs/scipy-0.9.0-r1 failed (compile phase):
 *   Building failed with CPython 2.7 in distutils_building() function
 * 
 * Call stack:
 *     ebuild.sh, line   93:  Called src_compile
 *   environment, line 5660:  Called distutils_src_compile 'config_fc' '--noopt' '--noarch'
 *   environment, line 1482:  Called python_execute_function 'distutils_building' 'config_fc' '--noopt' '--noarch'
 *   environment, line 3914:  Called die
 * The specific snippet of code:
 *                       die "${failure_message}";


Expected Results:  
Emerge fine.

[Comment 1 MaratIK 2012-12-14 20:33:30 UTC]

Created attachment 332312 [details]
emerge --info '=sci-libs/scipy-0.9.0-r1'

[Comment 2 MaratIK 2012-12-14 20:33:58 UTC]

Created attachment 332314 [details]
emerge -pqv '=sci-libs/scipy-0.9.0-r1'

[Comment 3 MaratIK 2012-12-14 20:34:30 UTC]

Created attachment 332316 [details]
/var/tmp/portage/sci-libs/scipy-0.9.0-r1/temp/build.log

[Comment 4 MaratIK 2012-12-14 20:34:53 UTC]

Created attachment 332318 [details]
/var/tmp/portage/sci-libs/scipy-0.9.0-r1/temp/environment

[Comment 5 MaratIK 2012-12-14 20:37:39 UTC]

info about installed blas, cblas, lapack libraries:

$ sudo eselect blas list
Installed BLAS for library directory lib64
  [1]   reference *
$ sudo eselect cblas list
Installed CBLAS for library directory lib64
  [1]   gsl
  [2]   reference *
$ sudo eselect lapack list
Installed LAPACK for library directory lib64
  [1]   reference *
$ sudo emerge -pqv blas-reference cblas-reference lapack-reference
[ebuild   R   ] sci-libs/blas-reference-20070226  USE="doc" 
[ebuild   R   ] sci-libs/cblas-reference-20030223-r4 
[ebuild   R   ] sci-libs/lapack-reference-3.1.1-r1  USE="doc"

[Comment 6 MaratIK 2012-12-14 20:50:46 UTC]

Remerging numpy fixes emerge scipy.