Portage 2.2.0_alpha134 (default/linux/amd64/10.0, gcc-4.7.1-asneeded, glibc-2.16.0, 3.4.7-hardened x86_64) ================================================================= System uname: Linux-3.4.7-hardened-x86_64-AMD_Opteron-TM-_Processor_6272-with-gentoo-2.2 Timestamp of tree: Fri, 28 Sep 2012 14:30:01 +0000 ccache version 3.1.8 [disabled] app-shells/bash: 4.2_p37 dev-java/java-config: 2.1.12 dev-lang/python: 2.6.8, 2.7.3-r2, 3.2.3-r1 dev-util/ccache: 3.1.8 dev-util/cmake: 2.8.9 sys-apps/baselayout: 2.2 sys-apps/openrc: 0.10.5 sys-apps/sandbox: 2.6 sys-devel/autoconf: 2.13, 2.69 sys-devel/automake: 1.4_p6-r1, 1.9.6-r3, 1.10.3, 1.11.6, 1.12.3 sys-devel/binutils: 2.22.90 sys-devel/gcc: 4.5.4, 4.6.3, 4.7.1 sys-devel/gcc-config: 1.7.3 sys-devel/libtool: 2.4.2 sys-devel/make: 3.82-r3 sys-kernel/linux-headers: 3.5 (virtual/os-headers) sys-libs/glibc: 2.16.0 Repositories: gentoo tbamd64 ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="*" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-O2 -pipe -ggdb -march=native -ftracer -frecord-gcc-switches" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /etc/entropy /opt/openjms/config /usr/share/bufrtables /usr/share/config /usr/share/gnupg/qualified.txt /usr/share/maven-bin-3.0/conf /usr/share/openvpn/easy-rsa /usr/share/qpsmtpd/plugins /usr/share/themes/oxygen-gtk/gtk-2.0 /var/bind /var/lib/hsqldb /var/lib/redmine/config /var/yp/Makefile" CONFIG_PROTECT_MASK="${EPREFIX}/etc/gconf /etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/games/angband/edit/ /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.3/ext-active/ /etc/php/apache2-php5.4/ext-active/ /etc/php/cgi-php5.3/ext-active/ /etc/php/cgi-php5.4/ext-active/ /etc/php/cli-php5.3/ext-active/ /etc/php/cli-php5.4/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/splash /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c /var/lib/redmine/config/locales /var/lib/redmine/config/settings.yml" CXXFLAGS="-O2 -pipe -ggdb -march=native -ftracer -frecord-gcc-switches" DISTDIR="/var/cache/portage/distfiles" FCFLAGS="-O2 -pipe -ggdb -march=native -frecord-gcc-switches" FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fail-clean fixlafiles news parallel-fetch protect-owned sandbox sfperms strict test test-fail-continue unknown-features-warn unmerge-orphans userfetch userpriv usersandbox" FFLAGS="-O2 -pipe -ggdb -march=native -frecord-gcc-switches" GENTOO_MIRRORS="http://ftp.ucsb.edu/pub/mirrors/linux/gentoo/ http://gentoo.mirrors.hoobly.com/ http://gentoo.llarian.net/" LANG="en_US.utf8" LC_ALL="C" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j24" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/tmp" PORTDIR="/var/cache/tinderbox/tree" PORTDIR_OVERLAY="/root/overlay" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="3dnow 3dnowex acl amd64 berkdb bzip2 cli cracklib crypt cups cxx dri emacs ffmpeg fortran gdbm gnutls gpm iconv ipv6 mmx modules mudflap multilib ncurses nls nptl openmp pam pax_kernel pcre pdf plasma pppd qt3support readline semantic-desktop session snmp sse sse2 sse3 sse4 ssl ssse3 tcmalloc tcpd udev unicode vhosts zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" PHP_TARGETS="php5-3" PYTHON_TARGETS="python3_2 python2_7" RUBY_TARGETS="ruby18 ruby19 ree18" USERLAND="GNU" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LINGUAS, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON
Which USE do you have for cholmod?
And the config.log would be nice. It is not reproducable here.
