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Bug 434982 - sys-apps/sandbox-2.6 - ../sandbox-2.6//configure: line 3708: ./conftest: cannot execute binary file
Summary: sys-apps/sandbox-2.6 - ../sandbox-2.6//configure: line 3708: ./conftest: cann...
Status: RESOLVED INVALID
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: New packages (show other bugs)
Hardware: AMD64 Linux
: Normal normal (vote)
Assignee: Sandbox Maintainers
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2012-09-14 08:07 UTC by erdbeer
Modified: 2012-09-16 21:48 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---


Attachments
/tmp/portage/sys-apps/sandbox-2.6/work/build-x86/config.log (config.log,23.25 KB, text/plain)
2012-09-14 16:29 UTC, erdbeer
Details

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Description erdbeer 2012-09-14 08:07:02 UTC
sys-apps/sandbox-2.6 fails to build. Emerging it with "FEATURES=-sandbox emerge sandbox", as suggested by portage, doesn't help either. Always reproducible.
Comment 1 erdbeer 2012-09-14 08:11:06 UTC
File uploads don't work for me here (don't know why), so I'm pasting this here:

 * Package:    sys-apps/sandbox-2.6
 * Repository: gentoo
 * Maintainer: sandbox@gentoo.org
 * USE:        amd64 elibc_glibc kernel_linux multilib userland_GNU
 * FEATURES:   sandbox
>>> Unpacking source...
>>> Unpacking sandbox-2.6.tar.xz to /tmp/portage/sys-apps/sandbox-2.6/work
 * Applying sandbox-2.6-trace-hppa.patch ...                                                 [ ok ]
>>> Source unpacked in /tmp/portage/sys-apps/sandbox-2.6/work
>>> Compiling source in /tmp/portage/sys-apps/sandbox-2.6/work/sandbox-2.6 ...
 * Configuring sandbox for ABI=amd64...
 * econf: updating sandbox-2.6/config.sub with /usr/share/gnuconfig/config.sub
 * econf: updating sandbox-2.6/config.guess with /usr/share/gnuconfig/config.guess
 * Configuring sandbox for ABI=x86...
../sandbox-2.6//configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --libdir=/usr/lib64
 * econf: updating sandbox-2.6/config.sub with /usr/share/gnuconfig/config.sub
 * econf: updating sandbox-2.6/config.guess with /usr/share/gnuconfig/config.guess
../sandbox-2.6//configure --prefix=/usr --build=i686-pc-linux-gnu --host=i686-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --libdir=/usr/lib32
checking for a BSD-compatible install... /usr/bin/install -c
checking for a BSD-compatible install... checking whether build environment is sane... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking for a thread-safe mkdir -p... yes
/bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... checking whether make supports nested variables... yes
yes
checking whether make supports nested variables... (cached) yes
checking whether make supports nested variables... checking environment state... ok
checking for x86_64-pc-linux-gnu-gcc... gcc
yes
checking whether make supports nested variables... (cached) yes
checking environment state... ok
checking for i686-pc-linux-gnu-gcc... gcc -m32
checking whether the C compiler works... checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... no
checking for suffix of object files... 
checking whether we are cross compiling... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... configure: error: in `/tmp/portage/sys-apps/sandbox-2.6/work/build-x86':
configure: error: cannot run C compiled programs.
If you meant to cross compile, use `--host'.
See `config.log' for more details
none needed
checking for style of include used by make... GNU
checking dependency style of gcc... 
!!! Please attach the following file when seeking support:
!!! /tmp/portage/sys-apps/sandbox-2.6/work/build-x86/config.log
 * ERROR: sys-apps/sandbox-2.6 failed (compile phase):
 *   econf failed
 * 
 * Call stack:
 *          ebuild.sh, line   85:  Called src_compile
 *        environment, line 2561:  Called multijob_child_init 'sb_configure'
 *        environment, line 2079:  Called sb_configure
 *        environment, line 2508:  Called econf
 *   phase-helpers.sh, line  503:  Called die
 * The specific snippet of code:
 *   			die "econf failed"
 * 
 * If you need support, post the output of `emerge --info '=sys-apps/sandbox-2.6'`,
 * the complete build log and the output of `emerge -pqv '=sys-apps/sandbox-2.6'`.
 * If configure failed with a 'cannot run C compiled programs' error, try this:
gcc3
checking whether gcc and cc understand -c and -o together...  * FEATURES=-sandbox emerge sandbox
/usr/lib64/portage/bin/isolated-functions.sh: line 214: wait: `econf failed': not a pid or valid job spec
 * The complete build log is located at '/tmp/sys-apps:sandbox-2.6:20120914-075046.log'.
 * For convenience, a symlink to the build log is located at '/tmp/portage/sys-apps/sandbox-2.6/temp/build.log'.
 * The ebuild environment file is located at '/tmp/portage/sys-apps/sandbox-2.6/temp/environment'.
 * Working directory: '/tmp/portage/sys-apps/sandbox-2.6/work/build-x86'
 * S: '/tmp/portage/sys-apps/sandbox-2.6/work/sandbox-2.6'
yes
checking for library containing strerror... none required
checking how to run the C preprocessor... gcc -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking whether it is safe to define __EXTENSIONS__... yes
checking for x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar
checking the archiver (x86_64-pc-linux-gnu-ar) interface... ar
checking whether make sets $(MAKE)... (cached) yes
checking for gawk... (cached) gawk
checking for egrep... (cached) /bin/grep -E
checking for readelf... readelf
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for fgrep... /bin/grep -F
checking for ld used by gcc... /usr/x86_64-pc-linux-gnu/bin/ld
checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r
checking for x86_64-pc-linux-gnu-objdump... x86_64-pc-linux-gnu-objdump
checking how to recognize dependent libraries... pass_all
checking for x86_64-pc-linux-gnu-dlltool... no
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for x86_64-pc-linux-gnu-ar... (cached) x86_64-pc-linux-gnu-ar
checking for archiver @FILE support... @
checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip
checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for x86_64-pc-linux-gnu-mt... no
checking for mt... no
checking if : is a manifest tool... no
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for multiple personalities... x86_64:-m64 x86:-m32 x32:-mx32
checking for size_t... yes
checking for working alloca.h... yes
checking for alloca... yes
checking for dirent.h that defines DIR... yes
checking for library containing opendir... none required
checking for ANSI C header files... (cached) yes
checking for sys/wait.h that is POSIX.1 compatible... yes
checking for dirent.h... yes
checking for dlfcn.h... (cached) yes
checking for elf.h... yes
checking for errno.h... yes
checking for execinfo.h... yes
checking for fcntl.h... yes
checking for grp.h... yes
checking for inttypes.h... (cached) yes
checking for libgen.h... yes
checking for limits.h... yes
checking for memory.h... (cached) yes
checking for pthread.h... yes
checking for pwd.h... yes
checking for siginfo.h... no
checking for signal.h... yes
checking for sigsegv.h... (cached) no
checking for stdarg.h... yes
checking for stdbool.h... yes
checking for stddef.h... yes
checking for stdint.h... (cached) yes
checking for stdio.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for strings.h... (cached) yes
checking for syscall.h... yes
checking for unistd.h... (cached) yes
checking for utime.h... yes
checking for sys/file.h... yes
checking for sys/mman.h... yes
checking for sys/param.h... yes
checking for sys/ptrace.h... yes
checking for sys/reg.h... yes
checking for sys/stat.h... (cached) yes
checking for sys/syscall.h... yes
checking for sys/time.h... yes
checking for sys/types.h... (cached) yes
checking for sys/user.h... yes
checking for sys/wait.h... (cached) yes
checking for asm/ptrace.h... yes
checking for linux/ptrace.h... yes
checking for an ANSI C-conforming const... yes
checking for uid_t in sys/types.h... yes
checking for mode_t... yes
checking for size_t... (cached) yes
checking whether environ is declared... yes
checking for ptrdiff_t... yes
checking for sighandler_t... yes
checking for sig_t... yes
checking for __sighandler_t... yes
checking for struct user_regs_struct... yes
checking for struct pt_regs... yes
checking size of struct user_regs_struct... 216
checking size of struct pt_regs... 168
checking for unistd.h... (cached) yes
checking for working chown... yes
checking for pid_t... yes
checking vfork.h usability... no
checking vfork.h presence... no
checking for vfork.h... no
checking for fork... yes
checking for vfork... yes
checking for working fork... yes
checking for working vfork... (cached) yes
checking whether lstat correctly handles trailing slash... yes
checking whether lstat accepts an empty string... no
checking whether lstat correctly handles trailing slash... (cached) yes
checking return type of signal handlers... void
checking whether stat accepts an empty string... no
checking for backtrace... yes
checking for creat64... yes
checking for faccessat... yes
checking for fchmodat... yes
checking for fchownat... yes
checking for fopen64... yes
checking for ftruncate... yes
checking for futimesat... yes
checking for getcwd... yes
checking for lchown... yes
checking for linkat... yes
checking for lutimes... yes
checking for memmove... yes
checking for memcpy... yes
checking for memset... yes
checking for mkdir... yes
checking for mkdirat... yes
checking for mkdtemp... yes
checking for mkfifoat... yes
checking for mknodat... yes
checking for mkostemp... yes
checking for mkostemp64... yes
checking for mkostemps... yes
checking for mkostemps64... yes
checking for mkstemp... yes
checking for mkstemp64... yes
checking for mkstemps... yes
checking for mkstemps64... yes
checking for open64... yes
checking for openat... yes
checking for openat64... yes
checking for pathconf... yes
checking for ptrace... yes
checking for realpath... yes
checking for remove... yes
checking for renameat... yes
checking for rmdir... yes
checking for setenv... yes
checking for strcasecmp... yes
checking for strchr... yes
checking for strdup... yes
checking for strerror... yes
checking for strndup... yes
checking for strrchr... yes
checking for strspn... yes
checking for strstr... yes
checking for strtok_r... yes
checking for symlinkat... yes
checking for truncate64... yes
checking for unlinkat... yes
checking for utime... yes
checking for utimensat... yes
checking for utimes... yes
checking for stackoverflow_install_handler in -lsigsegv... (cached) false
checking for __sync_lock_test_and_set... yes
checking for va_copy... va_copy
checking for library containing dlopen... -ldl
checking for dlvsym... yes
checking truncate argument type... off_t
checking for RTLD_NEXT... yes
checking libc path... /lib64/libc.so.6
checking libc version... libc.so.6
checking for /proc/self/fd... yes
checking for /dev/fd... yes
checking for /proc/self/cmdline... yes
checking for /proc/1/cmdline... yes
checking for /proc/16992/cmdline... yes
checking how to enable exception handling... -fexceptions
checking CFLAGS for maximum warnings... -Wall
checking whether C compiler accepts -Winvalid-pch... yes
checking whether C compiler accepts -fdata-sections... yes
checking whether C compiler accepts -ffunction-sections... yes
checking whether the linker accepts -Wl,--as-needed... yes
checking whether the linker accepts -Wl,--gc-sections... yes
checking whether the linker accepts -Wl,--no-undefined... yes
checking whether the linker accepts -Wl,--version-script,conftest.map... yes
configure: creating ./config.status
config.status: creating src/sandbox.sh
config.status: creating Makefile
config.status: creating data/Makefile
config.status: creating etc/Makefile
config.status: creating etc/sandbox.d/00default
config.status: creating etc/sandbox.d/Makefile
config.status: creating libsandbox/Makefile
config.status: creating libsbutil/Makefile
config.status: creating scripts/Makefile
config.status: creating src/Makefile
config.status: creating tests/atlocal
config.status: creating tests/Makefile
config.status: creating tests/package.m4
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
config.status: executing tests/atconfig commands
Comment 2 Jeroen Roovers (RETIRED) gentoo-dev 2012-09-14 14:10:12 UTC
1) Please attach the entire build log to this bug report.
2) Please post your `emerge --info' output in a comment.
Comment 3 erdbeer 2012-09-14 14:48:09 UTC
Comment 1 is the entire build log. The error message is not at the end because I use -j5 (not using it doesn't change much except putting that message at the end).
emerge --info =sys-apps/sandbox-2.6 is:

Portage 2.1.11.17 (default/linux/amd64/10.0, gcc-4.6.3, glibc-2.15-r2, 3.5.3-gentoo x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-3.5.3-gentoo-x86_64-Intel-R-_Core-TM-_i5-2430M_CPU_@_2.40GHz-with-gentoo-2.2
Timestamp of tree: Fri, 14 Sep 2012 12:00:01 +0000
app-shells/bash:          4.2_p37
dev-lang/python:          2.7.3-r2, 3.2.3-r1
dev-util/cmake:           2.8.9
dev-util/pkgconfig:       0.27.1
sys-apps/baselayout:      2.2
sys-apps/openrc:          0.10.5
sys-apps/sandbox:         2.5
sys-devel/autoconf:       2.13, 2.69
sys-devel/automake:       1.12.3
sys-devel/binutils:       2.22.90
sys-devel/gcc:            4.6.3
sys-devel/gcc-config:     1.7.3
sys-devel/libtool:        2.4.2
sys-devel/make:           3.82-r3
sys-kernel/linux-headers: 3.5 (virtual/os-headers)
sys-libs/glibc:           2.15-r2
Repositories: gentoo
ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-march=native -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles news parallel-fetch protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://ftp.halifax.rwth-aachen.de/gentoo/"
LANG="en_US.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j5"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY=""
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="acl amd64 berkdb bzip2 cli cracklib crypt cxx dri gdbm gpm iconv ipv6 mmx modules mudflap multilib ncurses nls nptl openmp pam pcre pppd readline session sse sse2 ssl tcpd unicode vaapi zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="evdev synaptics" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" PHP_TARGETS="php5-3" PYTHON_TARGETS="python3_2 python2_7" RUBY_TARGETS="ruby18 ruby19" USERLAND="GNU" VIDEO_CARDS="intel nouveau" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON
Comment 4 Jeroen Roovers (RETIRED) gentoo-dev 2012-09-14 15:47:58 UTC
!!! Please attach the following file when seeking support:
!!! /tmp/portage/sys-apps/sandbox-2.6/work/build-x86/config.log

Sorry, I meant config.log.
Comment 5 erdbeer 2012-09-14 16:29:46 UTC
Created attachment 323782 [details]
/tmp/portage/sys-apps/sandbox-2.6/work/build-x86/config.log
Comment 6 erdbeer 2012-09-14 16:30:07 UTC
Ah, now file upload worked..
Comment 7 erdbeer 2012-09-16 12:29:13 UTC
I (kind of) solved the problem by emerging with 'MULTILIB_ABIS="amd64" emerge sandbox'. Seems like the ebuild wants to configure for x86 and for x86_64, although my kernel is not compiled for running x86 binaries and although I use -multilib. This is because get_install_abis from /usr/portage/eclass/multilib.eclass returns x86 and x86_64. What's wrong there? Shouldn't portage detect that I'm running a x86_64-only kernel?
Comment 8 SpanKY gentoo-dev 2012-09-16 20:14:47 UTC
most likely you didn't enable 32bit support in your kernel
Comment 9 erdbeer 2012-09-16 20:50:21 UTC
That's what I said in Comment 7. So why does get_install_abis tell the ebuild to configure for 32 bit?
Comment 10 SpanKY gentoo-dev 2012-09-16 21:48:43 UTC
because you configured your system for multilib by using a multilib stage and profile.  the eclasses/ebuilds do not handle invalid configurations by design.