sci-libs/shapelib-1.3.0-r1 does not install the file /usr/include/libshp/shapefil.h causing for example the compilation of sci-geosciences/gpsbabel to fail. Downgrading to shapelib-1.2.10-r1 fixes the problem. emerge --info Portage 2.1.11.9 (default/linux/amd64/10.0/desktop/kde, gcc-4.6.3, glibc-2.15-r2, 3.5.0 x86_64) ================================================================= System uname: Linux-3.5.0-x86_64-AMD_Athlon-tm-_64_X2_Dual_Core_Processor_5000+-with-gentoo-2.1 Timestamp of tree: Sat, 04 Aug 2012 12:15:01 +0000 app-shells/bash: 4.2_p37 dev-java/java-config: 2.1.12 dev-lang/python: 2.7.3-r2, 3.2.3-r1 dev-util/cmake: 2.8.8-r3 dev-util/pkgconfig: 0.27 sys-apps/baselayout: 2.1-r1 sys-apps/openrc: 0.10.5 sys-apps/sandbox: 2.6 sys-devel/autoconf: 2.13, 2.69 sys-devel/automake: 1.11.6, 1.12.2 sys-devel/binutils: 2.22.90 sys-devel/gcc: 4.6.3 sys-devel/gcc-config: 1.7.3 sys-devel/libtool: 2.4.2 sys-devel/make: 3.82-r3 sys-kernel/linux-headers: 3.5 (virtual/os-headers) sys-libs/glibc: 2.15-r2 Repositories: gentoo science jtriley vmware sunrise local-overlay Installed sets: @system ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="* -@EULA AdobeFlash-10 AdobeFlash-10.1 AdobeFlash-10.3" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=athlon64 -O2 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-march=athlon64 -O2 -pipe" DISTDIR="/usr/portage/distfiles" EMERGE_DEFAULT_OPTS="--quiet-build n" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles news parallel-fetch parse-eapi-ebuild-head protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="http://mirror.mdfnet.se/gentoo http://trumpetti.atm.tut.fi/gentoo/ http://mirrors.linuxant.fr/distfiles.gentoo.org/" LANG="sv_SE.UTF-8" LC_ALL="sv_SE.UTF-8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" LINGUAS="sv en" MAKEOPTS="-j2" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/var/lib/layman/science /var/lib/layman/jtriley /var/lib/layman/vmware /var/lib/layman/sunrise /usr/portage.local" SYNC="rsync://rsync.europe.gentoo.org/gentoo-portage" USE="3dnow 3dnowext X a52 aac acpi alsa amd64 bash-completion berkdb branding bzip2 cdda cdparanoia cdr cli consolekit cracklib cups cxx dbus declarative djvu dri dts dvd dvdr emboss encode fam ffmpeg firefox fontconfig fortran gdbm gif gphoto2 iconv jpeg kde kipi lastfm libnotify mad mmx mmxext mng modules mp3 mp4 mpeg mplayer msn mtp mudflap multilib musicbrainz nls npp nptl nsplugin ogg opengl openmp pam pango pcre pdf phonon plasma png policykit ppds pppd pulseaudio qt3support qt4 readline rtc rtsp samba semantic-desktop session smp spell sse sse2 ssl startup-notification statistics svg symlink tcpd theora truetype udev udisks unicode upower usb vaapi vdpau vim-syntax vorbis x264 xcb xcomposite xext xinerama xml xscreensaver xv xvid xvmc zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="krita sheets stage words" CAMERAS="samsung" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="sv en" PHP_TARGETS="php5-3" PYTHON_TARGETS="python3_2 python2_7" RUBY_TARGETS="ruby19" USERLAND="GNU" VIDEO_CARDS="fbdev nv vga nvidia v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, INSTALL_MASK, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON
fixed in cvs.
