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Bug 409645 - sys-libs/tdb-1.2.9 deadlocks in configure phase (Check for -MD)
Summary: sys-libs/tdb-1.2.9 deadlocks in configure phase (Check for -MD)
Status: RESOLVED OBSOLETE
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: [OLD] Unspecified (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Patrick Lauer
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2012-03-25 14:56 UTC by Moritz Schlarb
Modified: 2012-03-27 18:08 UTC (History)
2 users (show)

See Also:
Package list:
Runtime testing required: ---


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Description Moritz Schlarb 2012-03-25 14:56:12 UTC
I just wanted to emerge samba on a new amd64 machine and while emerging sys-libs/tdb-1.2.9 it stops at
Check for -MD
and nothing more happens, it just waits infinitely for this step to complete.


Reproducible: Always

Steps to Reproduce:
emerge -v sys-libs/tdb-1.2.9
Actual Results:  
>>> Emerging (9 of 11) sys-libs/tdb-1.2.9
 * tdb-1.2.9.tar.gz RMD160 SHA1 SHA256 size ;-) ...                                                                                     [ ok ]
>>> Unpacking source...
>>> Unpacking tdb-1.2.9.tar.gz to /var/tmp/portage/sys-libs/tdb-1.2.9/work
>>> Source unpacked in /var/tmp/portage/sys-libs/tdb-1.2.9/work
>>> Preparing source in /var/tmp/portage/sys-libs/tdb-1.2.9/work/tdb-1.2.9 ...
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sys-libs/tdb-1.2.9/work/tdb-1.2.9 ...
CCFLAGS="-march=amdfam10 -O2 -pipe" LINKFLAGS="-Wl,-O1 -Wl,--as-needed" "/var/tmp/portage/sys-libs/tdb-1.2.9/work/tdb-1.2.9/buildtools/bin/waf" --prefix=/usr --libdir=/usr/lib64  configure
Checking for program gcc or cc           : x86_64-pc-linux-gnu-gcc 
Checking for program ar                  : x86_64-pc-linux-gnu-ar 
Checking for program ranlib              : x86_64-pc-linux-gnu-ranlib 
Checking for gcc                         : ok  
Checking for program git                 : /usr/bin/git 
Check for -MD                            : 



ps auxwww shows, that there are two processes with command line 

/usr/bin/python2.7 /var/tmp/portage/sys-libs/tdb-1.2.9/work/tdb-1.2.9/buildtools/bin/waf --prefix=/usr --libdir=/usr/lib64 configure

Manually killing the second (!) of those processes lets configuring continue like nothing happened.
Comment 1 Moritz Schlarb 2012-03-25 14:58:19 UTC
The same occurs for sys-libs/talloc-2.0.7 with the same very dirty workaround.
Comment 2 Víctor Ostorga (RETIRED) gentoo-dev 2012-03-27 14:19:32 UTC
This is quite a curious situation, please paste the output of 
emerge --info 
gcc-config -l

I think something is wrong with your gcc...
Comment 3 Moritz Schlarb 2012-03-27 18:08:22 UTC
Sigh... I can't reproduce it on the amd64 machine where it happened before...

Even if I unmerge it first and also if I emerge the previous version first and do an update then. 

Closing the bug then... Sorry for the fuss!

larrybox ~ # emerge --info
Portage 2.1.10.49 (hardened/linux/amd64, gcc-4.5.3, glibc-2.13-r4, 3.2.2-hardened-r1 x86_64)
=================================================================
System uname: Linux-3.2.2-hardened-r1-x86_64-AMD_Turion-tm-_II_Neo_N40L_Dual-Core_Processor-with-gentoo-2.0.3
Timestamp of tree: Sun, 25 Mar 2012 12:45:02 +0000
app-shells/bash:          4.2_p20
dev-lang/python:          2.7.2-r3, 3.2.2
dev-util/pkgconfig:       0.26
sys-apps/baselayout:      2.0.3
sys-apps/openrc:          0.9.8.4
sys-apps/sandbox:         2.5
sys-devel/autoconf:       2.68
sys-devel/automake:       1.11.1
sys-devel/binutils:       2.21.1-r1
sys-devel/gcc:            4.5.3-r2
sys-devel/gcc-config:     1.5-r2
sys-devel/libtool:        2.4-r1
sys-devel/make:           3.82-r1
sys-kernel/linux-headers: 3.1 (virtual/os-headers)
sys-libs/glibc:           2.13-r4
Repositories: gentoo
ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="* -@EULA"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=amdfam10 -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-march=amdfam10 -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FEATURES="assume-digests binpkg-logs distlocks ebuild-locks fixlafiles news parallel-fetch protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch"
FFLAGS=""
GENTOO_MIRRORS="ftp://ftp.halifax.rwth-aachen.de/gentoo/"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j3"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY=""
SYNC="rsync://rsync.europe.gentoo.org/gentoo-portage"
USE="acl amd64 berkdb bzip2 cli cracklib crypt cups cxx dri gdbm gpm hardened iconv justify mmx modules mudflap multilib ncurses nls nptl nptlonly openmp pam pax_kernel pcre pppd python readline session sse sse2 ssl sysfs tcpd unicode urandom xorg zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" PHP_TARGETS="php5-3" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="fbdev glint intel mach64 mga neomagic nouveau nv r128 radeon savage sis tdfx trident vesa via vmware dummy v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, LINGUAS, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS

larrybox ~ # gcc-config -l
 [1] x86_64-pc-linux-gnu-4.5.3 *