Python, R and rpy have emerged just fine. Issue "import rpy" into the python console Reproducible: Always Steps to Reproduce: 1.run python 2.and issue "import python 3. Actual Results: >>> import rpy Traceback (most recent call last): File "<stdin>", line 1, in <module> ImportError: No module named rpy Expected Results: be able to use some R statistical routines inside python. any
Please post your `emerge --info' output in a comment.
ferreirafm@mephisto ~ $ emerge --info Portage 2.1.10.11 (default/linux/amd64/10.0/desktop/kde, gcc-4.5.3, glibc-2.12.2-r0, 2.6.36-gentoo-r8 x86_64) ================================================================= System uname: Linux-2.6.36-gentoo-r8-x86_64-Intel-R-_Core-TM-_i7_CPU_930_@_2.80GHz-with-gentoo-2.0.3 Timestamp of tree: Fri, 02 Dec 2011 21:15:01 +0000 app-shells/bash: 4.1_p9 dev-java/java-config: 2.1.11-r3 dev-lang/python: 2.5.4-r4, 2.7.2-r3, 3.1.4-r3 dev-util/cmake: 2.8.4-r1 dev-util/pkgconfig: 0.26 sys-apps/baselayout: 2.0.3 sys-apps/openrc: 0.9.4 sys-apps/sandbox: 2.5 sys-devel/autoconf: 2.68 sys-devel/automake: 1.10.3, 1.11.1 sys-devel/binutils: 2.21.1-r1 sys-devel/gcc: 4.5.3-r1 sys-devel/gcc-config: 1.4.1-r1 sys-devel/libtool: 2.4-r1 sys-devel/make: 3.82-r1 sys-kernel/linux-headers: 2.6.39 (virtual/os-headers) sys-libs/glibc: 2.12.2 Repositories: gentoo science ACCEPT_KEYWORDS="amd64" ACCEPT_LICENSE="*" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=core2 -mtune=generic -O2 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt /var/lib/hsqldb" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-march=core2 -mtune=generic -O2 -pipe" DISTDIR="/usr/portage/distfiles" FEATURES="assume-digests binpkg-logs collision-protect distlocks ebuild-locks fixlafiles fixpackages news parallel-fetch protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch" FFLAGS="" GENTOO_MIRRORS="http://distfiles.gentoo.org" LANG="pt_BR.UTF-8" LDFLAGS="-Wl,--as-needed" LINGUAS="pt_BR en" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/var/lib/layman/science" SYNC="rsync://rsync.br.gentoo.org/gentoo-portage" USE="X a52 aac acl acpi additions alsa amd64 bash-completion berkdb bluetooth branding bzip2 cairo cdda cdr cli consolekit cracklib crypt cups cxx dbus declarative dri dts dvd dvdr dvdread emacs embedded emboss encode exif extensions extras fam ffmpeg fftw firefox flac fortran ftp gcj gdbm gdu ggc gif gimp gpm gtk gzip iconv icu imagemagick ipv6 java jpeg kde kipi kpathsea lapack latex lcms ldap libnotify mad midi mmx mng modules motif mp3 mp4 mpeg mudflap multilib ncurses nls nptl nptlonly nsplugin nss nvidia ogg opengl openmp pam pango pcre pdf phonon plasma png policykit ppds pppd python qt3support qt4 readline reiserfs samba sdl semantic-desktop session spell sse sse2 ssl startup-notification svg sysfs tar tcpd tetex threads tiff tk truetype type1 udev unicode usb vorbis x264 xcb xcomposite xft xinerama xml xorg xscreensaver xulrunner xv xvid zip zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan stage tables krita karbon braindump" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="pt_BR en" PHP_TARGETS="php5-3" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="nvidia" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, MAKEOPTS, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
please paste qlist rpy and python --version
ferreirafm@mephisto ~ $ python --version Python 2.7.2 ferreirafm@mephisto ~ $ qlist rpy /usr/lib64/python2.7/site-packages/rpy2/rlike/tests/test_container.py /usr/lib64/python2.7/site-packages/rpy2/rlike/tests/test_indexing.py /usr/lib64/python2.7/site-packages/rpy2/rlike/tests/test_functional.py /usr/lib64/python2.7/site-packages/rpy2/rlike/tests/__init__.py /usr/lib64/python2.7/site-packages/rpy2/rlike/functional.py /usr/lib64/python2.7/site-packages/rpy2/rlike/indexing.py /usr/lib64/python2.7/site-packages/rpy2/rlike/container.py /usr/lib64/python2.7/site-packages/rpy2/rlike/__init__.py /usr/lib64/python2.7/site-packages/rpy2/tests_rpy_classic.py /usr/lib64/python2.7/site-packages/rpy2/tests.py /usr/lib64/python2.7/site-packages/rpy2/robjects/lib/ggplot2.py /usr/lib64/python2.7/site-packages/rpy2/robjects/lib/grid.py /usr/lib64/python2.7/site-packages/rpy2/robjects/lib/__init__.py /usr/lib64/python2.7/site-packages/rpy2/robjects/metaprogramming.py /usr/lib64/python2.7/site-packages/rpy2/robjects/functions.py /usr/lib64/python2.7/site-packages/rpy2/robjects/vectors.py /usr/lib64/python2.7/site-packages/rpy2/robjects/tests/testMethods.py /usr/lib64/python2.7/site-packages/rpy2/robjects/tests/testArray.py /usr/lib64/python2.7/site-packages/rpy2/robjects/tests/testDataFrame.py /usr/lib64/python2.7/site-packages/rpy2/robjects/tests/testEnvironment.py /usr/lib64/python2.7/site-packages/rpy2/robjects/tests/testNumpyConversions.py /usr/lib64/python2.7/site-packages/rpy2/robjects/tests/testPackages.py /usr/lib64/python2.7/site-packages/rpy2/robjects/tests/testFormula.py /usr/lib64/python2.7/site-packages/rpy2/robjects/tests/testFunction.py /usr/lib64/python2.7/site-packages/rpy2/robjects/tests/__init__.py /usr/lib64/python2.7/site-packages/rpy2/robjects/tests/testVector.py /usr/lib64/python2.7/site-packages/rpy2/robjects/tests/testRobjects.py /usr/lib64/python2.7/site-packages/rpy2/robjects/tests/testRObject.py /usr/lib64/python2.7/site-packages/rpy2/robjects/packages.py /usr/lib64/python2.7/site-packages/rpy2/robjects/methods.py /usr/lib64/python2.7/site-packages/rpy2/robjects/numpy2ri.py /usr/lib64/python2.7/site-packages/rpy2/robjects/conversion.py /usr/lib64/python2.7/site-packages/rpy2/robjects/robject.py /usr/lib64/python2.7/site-packages/rpy2/robjects/__init__.py /usr/lib64/python2.7/site-packages/rpy2/rpy_classic.py /usr/lib64/python2.7/site-packages/rpy2/images/rpy2_logo.png /usr/lib64/python2.7/site-packages/rpy2/rinterface/tests/test_SexpVector.py /usr/lib64/python2.7/site-packages/rpy2/rinterface/tests/test_SexpVectorNumeric.py /usr/lib64/python2.7/site-packages/rpy2/rinterface/tests/test_Sexp.py /usr/lib64/python2.7/site-packages/rpy2/rinterface/tests/test_SexpEnvironment.py /usr/lib64/python2.7/site-packages/rpy2/rinterface/tests/test_Device.py /usr/lib64/python2.7/site-packages/rpy2/rinterface/tests/test_EmbeddedR.py /usr/lib64/python2.7/site-packages/rpy2/rinterface/tests/__init__.py /usr/lib64/python2.7/site-packages/rpy2/rinterface/tests/test_SexpClosure.py /usr/lib64/python2.7/site-packages/rpy2/rinterface/rpy_device.so /usr/lib64/python2.7/site-packages/rpy2/rinterface/__init__.py /usr/lib64/python2.7/site-packages/rpy2/rinterface/rinterface.so /usr/lib64/python2.7/site-packages/rpy2/__init__.py /usr/lib64/python2.7/site-packages/rpy2-2.1.9-py2.7.egg-info /usr/share/doc/rpy-2.1.9/AUTHORS.bz2 /usr/share/doc/rpy-2.1.9/NEWS.bz2 /usr/share/doc/rpy-2.1.9/README.bz2
According to upstream, rpy and rpy2 isn't the same thing. Since we only host 2.x versions, the correct syntax should be "import rpy2".
oh man! What a shame? Sorry for the inconvenience. Thanks for helping.
It may also be worth noting that the variable PYTHON_MODNAME="${MY_PN}" gets set to rpy2 since MY_PN=${PN}${SLOT}. This does make me wonder if perhaps we should consider dropping the ${SLOT} element from the MODNAME since we no longer support dev-python/rpy:1. Any thoughts on this?
thanks all. closing as invalid. keeping the slot for now since api is changing slightly lately.
