Created attachment 289605 [details] full build log ake[2]: Leaving directory `/var/tmp/portage/dev-lang/R-2.13.1-r1/work/R-2.13.1/po' make[1]: Leaving directory `/var/tmp/portage/dev-lang/R-2.13.1-r1/work/R-2.13.1/po' you should 'make docs' now ... make[1]: Entering directory `/var/tmp/portage/dev-lang/R-2.13.1-r1/work/R-2.13.1/doc' *** stack smashing detected ***: R - terminated R: stack smashing attack in function <unknown> - terminated Report to http://bugs.gentoo.org/ /bin/sh: line 1: 8890 Done echo "options(warn=1);saveRDS(tools:::prepare_Rd(tools::parse_Rd(\"./NEWS.Rd\"), stages = 'install'), 'NEWS.rds')" 8891 Killed | ../bin/R --vanilla --slave make[1]: *** [NEWS.rds] Error 137 make[1]: Leaving directory `/var/tmp/portage/dev-lang/R-2.13.1-r1/work/R-2.13.1/doc' make: [docs] Error 2 (ignored) make[1]: Entering directory `/var/tmp/portage/dev-lang/R-2.13.1-r1/work/R-2.13.1/src/library' make[2]: Entering directory `/var/tmp/portage/dev-lang/R-2.13.1-r1/work/R-2.13.1/src/library' installing parsed Rd make[3]: Entering directory `/var/tmp/portage/dev-lang/R-2.13.1-r1/work/R-2.13.1/src/library' *** stack smashing detected ***: R - terminated R: stack smashing attack in function <unknown> - terminated Report to http://bugs.gentoo.org/ /bin/sh: line 2: 8938 Done echo "options(warn=1);tools:::.install_package_Rd_objects('./stats', '../../library/stats')" 8939 Killed | R_DEFAULT_PACKAGES=NULL ../../bin/R --vanilla --slave make[3]: *** [stats.Rdts] Error 1 make[3]: *** Waiting for unfinished jobs.... *** stack smashing detected ***: R - terminated R: stack smashing attack in function <unknown> - terminated Report to http://bugs.gentoo.org/ /bin/sh: line 2: 8937 Done echo "options(warn=1);tools:::.install_package_Rd_objects('./base', '../../library/base')" 8940 Killed | R_DEFAULT_PACKAGES=NULL ../../bin/R --vanilla --slave make[3]: *** [base.Rdts] Error 1 make[3]: Leaving directory `/var/tmp/portage/dev-lang/R-2.13.1-r1/work/R-2.13.1/src/library' make[2]: *** [Rdobjects] Error 2 make[2]: Leaving directory `/var/tmp/portage/dev-lang/R-2.13.1-r1/work/R-2.13.1/src/library' make[1]: *** [docs] Error 2 make[1]: Leaving directory `/var/tmp/portage/dev-lang/R-2.13.1-r1/work/R-2.13.1/src/library' make: [docs] Error 2 (ignored) make[1]: Entering directory `/var/tmp/portage/dev-lang/R-2.13.1-r1/work/R-2.13.1/src/library/Recommended' make[2]: Entering directory `/var/tmp/portage/dev-lang/R-2.13.1-r1/work/R-2.13.1/src/library/Recommended' begin installing recommended package MASS begin installing recommended package lattice * installing *source* package ‘lattice’ ... *** stack smashing detected ***: R - terminated R: stack smashing attack in function <unknown> - terminated Report to http://bugs.gentoo.org/ /var/tmp/portage/dev-lang/R-2.13.1-r1/work/R-2.13.1/bin/INSTALL: line 34: 8961 Done echo 'tools:::.install_packages()' 8962 Killed | R_DEFAULT_PACKAGES= LC_COLLATE=C "${R_HOME}/bin/R" $myArgs --slave --args ${args} make[2]: *** [lattice.ts] Error 1 make[2]: *** Waiting for unfinished jobs.... * installing *source* package ‘MASS’ ... ** libs make[3]: Entering directory `/var/tmp/portage/dev-lang/R-2.13.1-r1/temp/Rtmp0fpjra/R.INSTALL266f90ba/MASS/src' i686-pc-linux-gnu-gcc -std=gnu99 -I/var/tmp/portage/dev-lang/R-2.13.1-r1/work/R-2.13.1/include -I/usr/local/include -fpic -O2 -march=core2 -mfpmath=sse -mmmx -msse -msse2 -mssse3 -pipe -c MASS.c -o MASS.o i686-pc-linux-gnu-gcc -std=gnu99 -I/var/tmp/portage/dev-lang/R-2.13.1-r1/work/R-2.13.1/include -I/usr/local/include -fpic -O2 -march=core2 -mfpmath=sse -mmmx -msse -msse2 -mssse3 -pipe -c lqs.c -o lqs.o i686-pc-linux-gnu-gcc -std=gnu99 -shared -Wl,-O1 -Wl,--as-needed -o MASS.so MASS.o lqs.o -L/var/tmp/portage/dev-lang/R-2.13.1-r1/work/R-2.13.1/lib -lR make[3]: Leaving directory `/var/tmp/portage/dev-lang/R-2.13.1-r1/temp/Rtmp0fpjra/R.INSTALL266f90ba/MASS/src' installing to /var/tmp/portage/dev-lang/R-2.13.1-r1/work/R-2.13.1/library/MASS/libs ** R ** data ** moving datasets to lazyload DB ** inst ** preparing package for lazy loading ** help *** stack smashing detected ***: R - terminated R: stack smashing attack in function <unknown> - terminated Report to http://bugs.gentoo.org/ /var/tmp/portage/dev-lang/R-2.13.1-r1/work/R-2.13.1/bin/INSTALL: line 34: 8959 Done echo 'tools:::.install_packages()' 8960 Killed | R_DEFAULT_PACKAGES= LC_COLLATE=C "${R_HOME}/bin/R" $myArgs --slave --args ${args} make[2]: *** [MASS.ts] Error 1 make[2]: Leaving directory `/var/tmp/portage/dev-lang/R-2.13.1-r1/work/R-2.13.1/src/library/Recommended' make[1]: *** [recommended-packages] Error 2 make[1]: Leaving directory `/var/tmp/portage/dev-lang/R-2.13.1-r1/work/R-2.13.1/src/library/Recommended' make: *** [stamp-recommended] Error 2 * ERROR: dev-lang/R-2.13.1-r1 failed (compile phase): * emake failed * * If you need support, post the output of 'emerge --info =dev-lang/R-2.13.1-r1', * the complete build log and the output of 'emerge -pqv =dev-lang/R-2.13.1-r1'. * The complete build log is located at '/var/tmp/portage/dev-lang/R-2.13.1-r1/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/dev-lang/R-2.13.1-r1/temp/environment'. * S: '/var/tmp/portage/dev-lang/R-2.13.1-r1/work/R-2.13.1' >>> Failed to emerge dev-lang/R-2.13.1-r1, Log file: >>> '/var/tmp/portage/dev-lang/R-2.13.1-r1/temp/build.log' emerge --info https://bugs.gentoo.org/attachment.cgi?id=288639
I'm building a new machine with amd64 and hardened and was also unable to build R-2.31.1-r1 with the same problem as listed.
same with 2.14.0?
(In reply to comment #2) > same with 2.14.0? 2.14 - works ok - bug is fixed
