I am running on vanilla 3.0 kernel and hit the bug with python compilation on that. That is fixed with -r2 (bug #374579) but I get a file collision against an unknown "package". I don't think I have ever installed python manually. ;) >>> Completed installing python-2.6.7-r2 into /var/tmp/portage/dev-lang/python-2.6.7-r2/image/ ecompressdir: bzip2 -9 /usr/share/man >>> Installing (4 of 4) dev-lang/python-2.6.7-r2 Switching to python2.7 * Compilation and optimization of Python modules placed outside of site-packages directories for CPython 2.6 ... [ ok ] * * If you want to help in testing of recent changes in Python, then you can use * snapshots of Python from python overlay. * * Messages for package dev-lang/python-3.2-r2: * This package will overwrite one or more files that may belong to other * packages (see list below). You can use a command such as `portageq * owners / <filename>` to identify the installed package that owns a * file. If portageq reports that only one package owns a file then do * NOT file a bug report. A bug report is only useful if it identifies at * least two or more packages that are known to install the same file(s). * If a collision occurs and you can not explain where the file came from * then you should simply ignore the collision since there is not enough * information to determine if a real problem exists. Please do NOT file * a bug report at http://bugs.gentoo.org unless you report exactly which * two packages install the same file(s). Once again, please do NOT file * a bug report unless you have completely understood the above message. * * Detected file collision(s): * * /usr/lib/llibpython3.so * * Searching all installed packages for file collisions... * * Press Ctrl-C to Stop * * None of the installed packages claim the file(s). * * Package 'dev-lang/python-3.2-r2' merged despite file collisions. If * necessary, refer to your elog messages for the whole content of the * above message. * Messages for package dev-lang/python-3.1.4-r2: * * If you want to help in testing of recent changes in Python, then you can use * snapshots of Python from python overlay. * * Messages for package dev-lang/python-2.7.2-r2: * "bsddb" module is out-of-date and no longer maintained inside dev-lang/python. * "bsddb" and "dbhash" modules have been additionally removed in Python 3. * You should use external, still maintained "bsddb3" module provided by dev-python/bsddb3, * which supports both Python 2 and Python 3. * * If you want to help in testing of recent changes in Python, then you can use * snapshots of Python from python overlay. * * Messages for package dev-lang/python-2.6.7-r2: * "bsddb" module is out-of-date and no longer maintained inside dev-lang/python. * "bsddb" and "dbhash" modules have been additionally removed in Python 3. * You should use external, still maintained "bsddb3" module provided by dev-python/bsddb3, * which supports both Python 2 and Python 3. * * If you want to help in testing of recent changes in Python, then you can use * snapshots of Python from python overlay. * # emerge --info Portage 2.1.10.7 (default/linux/x86/10.0/desktop, gcc-4.5.2, glibc-2.13-r4, 3.0.0 i686) ================================================================= System uname: Linux-3.0.0-i686-Mobile_Intel-R-_Pentium-R-_4_-_M_CPU_1.80GHz-with-gentoo-2.0.3 Timestamp of tree: Sun, 24 Jul 2011 21:45:01 +0000 distcc 3.1 i686-pc-linux-gnu [enabled] app-shells/bash: 4.2_p10 dev-java/java-config: 1.3.7-r1, 2.1.11-r3 dev-lang/python: 2.5.4-r4, 2.6.7-r2, 2.7.2-r2, 3.1.4-r2, 3.2-r2 dev-util/cmake: 2.8.5-r2 dev-util/pkgconfig: 0.26 sys-apps/baselayout: 2.0.3 sys-apps/openrc: 0.8.3-r1 sys-apps/sandbox: 2.5 sys-devel/autoconf: 2.13::<unknown repository>, 2.68 sys-devel/automake: 1.4_p6-r1, 1.5-r1, 1.6.3-r1, 1.7.9-r2, 1.8.5-r4, 1.9.6-r3, 1.10.3, 1.11.1-r1 sys-devel/binutils: 2.21.1 sys-devel/gcc: 3.3.6-r1, 4.2.4-r1, 4.3.5, 4.4.5, 4.5.2 sys-devel/gcc-config: 1.4.1-r1 sys-devel/libtool: 2.4-r1 sys-devel/make: 3.81-r2 sys-kernel/linux-headers: 2.6.38 (virtual/os-headers) sys-libs/glibc: 2.13-r4 Repositories: gentoo x-portage science ACCEPT_KEYWORDS="x86 ~x86" ACCEPT_LICENSE="* -@EULA dlj-1.1 sun-bcla-java-vm Nero-EULA-US skype-eula AdobeFlash AdobeFlash-10 AdobeFlash-10.1 PUEL" CBUILD="i686-pc-linux-gnu" CFLAGS="-O2 -march=pentium4m -mmmx -msse -msse2 -pipe -fno-strict-aliasing -ggdb" CHOST="i686-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt /usr/share/openvpn/easy-rsa /var/bind /var/lib/hsqldb /var/vpopmail/etc" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.2/ext-active/ /etc/php/apache2-php5.3/ext-active/ /etc/php/cgi-php5.2/ext-active/ /etc/php/cgi-php5.3/ext-active/ /etc/php/cli-php5.2/ext-active/ /etc/php/cli-php5.3/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-O2 -march=pentium4m -mmmx -msse -msse2 -pipe -fno-strict-aliasing -ggdb" DISTDIR="/usr/portage/distfiles" FEATURES="assume-digests binpkg-logs distcc distlocks ebuild-locks fixlafiles fixpackages metadata-transfer news nostrip parallel-fetch protect-owned sandbox sfperms splitdebug strict unknown-features-warn unmerge-logs unmerge-orphans userfetch" FFLAGS="" GENTOO_MIRRORS="http://gentoo.mirror.web4u.cz" LDFLAGS="-Wl,-O1 -Wl,--as-needed" LINGUAS="en cs cz" MAKEOPTS="-j4" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/usr/local/portage /home/mmokrejs/proj/sci" SYNC="rsync://rsync.europe.gentoo.org/gentoo-portage" USE="32bit 7zip R X Xaw3d a52 aac aalib ace acl acpi alsa amr amrnb amrwb apache apache2 apng audacious audiofile bash-completion bcmath berkdb blas bluetooth boost branding bzip2 cairo caps cblas cdda cddb cdparanoia cdr cgi clamav cli colordiff compress consolekit cpio cracklib crypt cscope css ctype cups curl curlwrappers cxx dbi dbus dga dhcp dia directfb djbfft dri dts dv dvb dvd dvdr dvdread emboss emf enblend encode enscript exif expat faad fam fame fat fbcon ffmpeg fftw firefox flac flash fontconfig fortran fpx ftp gcj gd gdbm gdu ggi gif gimp gimpprint glibc-compat20 glibc-omitfp glut gmp gnuplot gnutls gpgme gphoto2 gpm graphviz gs gsl gsm gtk gtkhtml hdf hdf5 hp2xx i8x0 iconv icu id3 id3tag ieee1394 imagemagick imlib inifile innodb ithreads jack java javascript jbig jce jikes jpeg jpeg2k kdtree kerberos ladspa lame lapack laptop largefile lcms leim libcaca libnotify libwww live lzo lzw mad maildir matroska mhash mikmod mime ming mjpeg mmap mmx mng mod_python modperl modplug modules motif mozilla moznoirc mp2 mp3 mp4 mpeg mplayer mudflap mule musepack mxdatetime mysql mysqli nat ncurses netcdf netpbm network nls nntp nptl nptlonly nsplugin ntfs numeric objc ogg opengl openmp openssl pam pango parport pcmcia pcntl pcre pdf perl php plotutils plugin png pnm policykit postproc postscript ppds pppd procmail pymol python qt3support qt4 quicktime rar raw readline recode reiserfs romio rpm samba sasl scanner scp sdl seamonkey server session sftp sift slp smime sndfile soap sockets spell sqlite srt sse sse2 ssl startup-notification static-libs subtitles subversion svg svgz sysfs sysvipc t1lib tcl tcpd theora threads tidy tiff tk transcode truetype udev unicode urandom usb userlocales utils uuencode v4l v4l2 vcd vhook vim-syntax vim-with-x vorbis wavpack wifi win32codecs wmf wxwindows x264 x86 xanim xcb xcf xfs xft xinerama xinetd xml xorg xpm xsl xslt xulrunner xv xvid xvmc yv12 zip zlib" ALSA_CARDS="intel-8x0m" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic auth_digest authn_anon authn_dbd authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dbd deflate dir disk_cache env expires ext_filter file_cache filter headers icu ident imagemap include info log_config mem_cache mime mime_magic php rewrite setenvif speling status unique_id userdir usertrack vhost_alias negotiation" CALLIGRA_FEATURES="braindump flow karbon kexi kpresenter krita tables words" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="en cs cz" PHP_TARGETS="php-5-3" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="radeon vesa" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Same here: * package dev-lang/python-3.2-r2 NOT merged * * Detected file collision(s): * * /usr/lib64/llibpython3.so * * Searching all installed packages for file collisions... * * Press Ctrl-C to Stop * * None of the installed packages claim the file(s). * * Package 'dev-lang/python-3.2-r2' NOT merged due to file collisions. If * necessary, refer to your elog messages for the whole content of the * above message. >>> Failed to install dev-lang/python-3.2-r2, Log file: >>> '/var/tmp/portage/dev-lang/python-3.2-r2/temp/build.log' * GNU info directory index is up-to-date. * After world updates, it is important to remove obsolete packages with * emerge --depclean. Refer to `man emerge` for more information. sad ~ # equery b /usr/lib64/llibpython3.so * Searching for /usr/lib64/llibpython3.so ... dev-lang/python-3.2 (/usr/lib64/libpython3.so) I guess it should have been "libpython" instead of "llibpython"
(In reply to comment #0) > * Detected file collision(s): > * > * /usr/lib/llibpython3.so > * > * Searching all installed packages for file collisions... > * > * Press Ctrl-C to Stop > * > * None of the installed packages claim the file(s). Same here (both x86 and amd64) > * > * Package 'dev-lang/python-3.2-r2' merged despite file collisions. If > * necessary, refer to your elog messages for the whole content of the > * above message. Here it's different - i have dev-lang/python-3.2 installed (which can be no longer found in portage) - and upgrade to python-3.2-r2 fails. On x86: * Detected file collision(s): * * /usr/lib/llibpython3.so * * Searching all installed packages for file collisions... * * Press Ctrl-C to Stop * * None of the installed packages claim the file(s). * * Package 'dev-lang/python-3.2-r2' NOT merged due to file collisions. At the same time: equery b /usr/lib/llibpython3.so * Searching for /usr/lib/llibpython3.so ... dev-lang/python-3.2 (/usr/lib/libpython3.so) Was able to workaround by masking 3.2, downgrading to 3.1.something and then unmasking and upgrading to 3.2 BTW the later displays: * QA Notice: Missing soname symlink(s) will be automatically created: * * usr/lib64/llibpython3.so -> libpython3.so So my endeavor seems like a lot of unnecessary work - it seems a safe workaround to just rm /usr/lib/llibpython3.so (x86) rm /usr/lib64/llibpython3.so (amd64) and do upgrade afterwards (tested on x86)
Anyone noticed the name being weird? *l*libpython3.so? That looks like a bug in the buildsystem.
Fixed in CVS http://bugs.python.org/issue11347
