Gentoo Websites Logo
Go to: Gentoo Home Documentation Forums Lists Bugs Planet Store Wiki Get Gentoo!
Bug 374721 - [Overlay Bicatali] MKL and GSL conflict
Summary: [Overlay Bicatali] MKL and GSL conflict
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: [OLD] Library (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Sébastien Fabbro (RETIRED)
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2011-07-10 17:16 UTC by Hao Xiong
Modified: 2011-07-18 21:33 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments

Note You need to log in before you can comment on or make changes to this bug.
Description Hao Xiong 2011-07-10 17:16:17 UTC
I am using MKL-10.3.4.191 from Bicatali and it prevents me from installing GSL.
I got the following message:

[ebuild     UD ] app-admin/eselect-1.2.15 [1.2.15-r1] USE="bash-completion -doc" 0 kB [1=>0]
[ebuild  N     ] app-admin/eselect-cblas-0.1  0 kB [0]
[ebuild  N     ] sci-libs/gsl-1.14  USE="cblas-external" 0 kB [0]
[blocks B      ] app-admin/eselect-cblas ("app-admin/eselect-cblas" is blocking sci-libs/mkl-10.3.4.191)

Total: 4 packages (2 downgrades, 2 new), Size of downloads: 0 kB
Conflict: 1 block (1 unsatisfied)
Portage tree and overlays:
 [0] /usr/portage
 [1] /var/lib/layman/bicatali

 * Error: The above package list contains packages which cannot be
 * installed at the same time on the same system.

  (app-admin/eselect-cblas-0.1::gentoo, ebuild scheduled for merge) pulled in by
    app-admin/eselect-cblas required by (sci-libs/gsl-1.14::gentoo, ebuild scheduled for merge)

  (sci-libs/mkl-10.3.4.191::bicatali, installed) pulled in by
    >=sci-libs/mkl-9.1.023 required by (virtual/cblas-1.0::gentoo, installed)
    >=sci-libs/mkl-10 required by (virtual/lapack-3.1::gentoo, installed)
    >=sci-libs/mkl-9.1.023 required by (virtual/blas-1.0::gentoo, installed)
    sci-libs/mkl required by @selected


For more information about Blocked Packages, please refer to the following
section of the Gentoo Linux x86 Handbook (architecture is irrelevant):

http://www.gentoo.org/doc/en/handbook/handbook-x86.xml?full=1#blocked


Reproducible: Always
Comment 1 François Bissey 2011-07-18 00:05:50 UTC
You have to install gsl from bicatali's overlay as well. gsl comes with its own cblas so it is covered by his overlay. That means that if you want gsl, you'll have to use gsl-1.15-r1 from bicatali's overlay.
Comment 2 Hao Xiong 2011-07-18 21:33:58 UTC
Yes, you are right. Somehow, I only unmasked gsl-1.15 and not gsl-1.15-r1, so I was still using portage's version.