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Bug 374299 - sci-libs/blas-atlas-3.9.23-r4 failed to build, libf77blas.a not made...
Summary: sci-libs/blas-atlas-3.9.23-r4 failed to build, libf77blas.a not made...
Status: RESOLVED INVALID
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal
Assignee: Gentoo Linux bug wranglers
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2011-07-07 03:47 UTC by Mathieu Z
Modified: 2011-07-08 05:45 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
build.log (build.log.zip,427.22 KB, application/zip)
2011-07-07 03:54 UTC, Mathieu Z
Details

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Description Mathieu Z 2011-07-07 03:47:56 UTC
Emerging blas-atlas failed at compile stage. Failed to cd into non-existing directory gentoo/libf77blas.a

Reproducible: Always

Steps to Reproduce:
1. emerge blas-atlas
OR
2. MAKEOPTS="-j1" emerge blas-atlas
Actual Results:  
cd gentoo/libf77blas.a ; \
       	libtool --mode=link --tag=CC cc -Wl,-O1 -Wl,--as-needed -Wl,-O2 -Wl,--hash-style=both -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.2 -lgfortran -o libblas.la \
       		../libs/libatlas.la *.lo -rpath //usr/lib64/blas/atlas; \
rm -f .libs/libblas.so.0.0.0; \
cc -shared -Wl,-O1 -Wl,--as-needed -Wl,-O2 -Wl,--hash-style=both .libs/*.o -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.2 -lgfortran /var/tmp/portage/sci-libs/blas-atlas-3.9.23-r4/work/ATLAS/gentoo-build/gentoo/libs/libatlas.so \
       	      -Wl,-soname -Wl,libblas.so.0 -o .libs/libblas.so.0.0.0; \
libtool --mode=install cp libblas.la /var/tmp/portage/sci-libs/blas-atlas-3.9.23-r4/work/ATLAS/gentoo-build/gentoo/libs
/bin/sh: line 0: cd: gentoo/libf77blas.a: No such file or directory
libtool: link: `*.lo' is not a valid libtool object
gcc: .libs/*.o: No such file or directory
libtool: install: `libblas.la' is not a valid libtool archive
libtool: install: Try `libtool --help --mode=install' for more information.
make[1]: *** [libblas.so] Error 1
make[1]: Leaving directory `/var/tmp/portage/sci-libs/blas-atlas-3.9.23-r4/work/ATLAS/gentoo-build'
make: *** [shared] Error 2
emake failed
 * ERROR: sci-libs/blas-atlas-3.9.23-r4 failed (compile phase):
 *   failed to build shared libraries
 * 
 * Call stack:
 *     ebuild.sh, line  56:  Called src_compile
 *   environment, line 2348:  Called die
 * The specific snippet of code:
 *       emake -j1 LIBDIR=$(get_libdir) RPATH="${EPREFIX}/${RPATH}"/atlas shared || die "failed to build shared libraries";
 * 
 * If you need support, post the output of 'emerge --info =sci-libs/blas-atlas-3.9.23-r4',
 * the complete build log and the output of 'emerge -pqv =sci-libs/blas-atlas-3.9.23-r4'.
 * The complete build log is located at '/var/log/portage/sci-libs:blas-atlas-3.9.23-r4:20110706-220835.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sci-libs/blas-atlas-3.9.23-r4/temp/environment'.
 * S: '/var/tmp/portage/sci-libs/blas-atlas-3.9.23-r4/work/ATLAS'


# emerge --info
Portage 2.1.10.4 (default/linux/amd64/10.0, gcc-4.5.2, glibc-2.13-r3, 2.6.39-gentoo-r2 x86_64)
=================================================================
System uname: Linux-2.6.39-gentoo-r2-x86_64-Intel-R-_Core-TM-_i7_CPU_L_620_@_2.00GHz-with-gentoo-2.0.3
Timestamp of tree: Wed, 06 Jul 2011 06:00:01 +0000
ccache version 3.1.5 [enabled]
app-shells/bash:          4.2_p10
dev-java/java-config:     2.1.11-r3
dev-lang/python:          2.7.2, 3.2
dev-util/ccache:          3.1.5
dev-util/cmake:           2.8.4-r1
dev-util/pkgconfig:       0.26
sys-apps/baselayout:      2.0.3
sys-apps/openrc:          0.8.3-r1
sys-apps/sandbox:         2.5
sys-devel/autoconf:       2.13, 2.68
sys-devel/automake:       1.11.1-r1
sys-devel/binutils:       2.21.1
sys-devel/gcc:            4.5.2
sys-devel/gcc-config:     1.4.1-r1
sys-devel/libtool:        2.4-r1
sys-devel/make:           3.82-r1
sys-kernel/linux-headers: 2.6.38 (virtual/os-headers)
sys-libs/glibc:           2.13-r3
Repositories: gentoo x11 java-overlay sunrise lisp science desktop-effects gentoo-zh mz-overylay
ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -fomit-frame-pointer -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt /usr/share/openvpn/easy-rsa"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/splash /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=native -fomit-frame-pointer -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
EMERGE_DEFAULT_OPTS="--keep-going"
FEATURES="assume-digests binpkg-logs ccache distlocks ebuild-locks fixlafiles fixpackages metadata-transfer news parallel-fetch protect-owned sandbox sfperms sign strict unknown-features-warn unmerge-logs unmerge-orphans userfetch"
FFLAGS=""
GENTOO_MIRRORS="http://distro.ibiblio.org/pub/linux/distributions/gentoo/ http://gentoo.osuosl.org/ http://ftp.ucsb.edu/pub/mirrors/linux/gentoo/"
LANG="en_US.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,-O2 -Wl,--hash-style=both"
LINGUAS="en ja zh zh_CN zh_TW en_US en_GB"
MAKEOPTS="-j4 --load-average"
PKGDIR="/usr/portage//packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/var/lib/layman/x11 /var/lib/layman/java-overlay /var/lib/layman/sunrise /var/lib/layman/lisp /var/lib/layman/science /var/lib/layman/desktop-effects /var/lib/layman/gentoo-zh /usr/local/portage"
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="3dnow 3dnowext X a52 aac aalib acl acpi aim alsa amd64 apache2 audiofile avahi bash-completion bcmath berkdb bidi bittorrent blas bluetooth branding bzip2 cairo calendar caps ccache cdaudio cdda cjk cleartype cli clisp consolekit cracklib crypt cscope css ctype cups curl curlwrappers cxx dbus dbx dga dhcpcd directfb djvu dri dts dv dvd dvdread dvi eds emacs emacs-w3 encode enscript evo exif expat faac fam fastcgi fbcon ffmpeg fftw flac flash fontconfig foomaticdb fortran freetds ftp fuse gcl gconf gd gdbm ginac git glib glitz glut gnome gnome-keyring gnuplot gnutls gphoto2 gpm gps gs gsl gstreamer gtk gtk3 gtkhtml gzip hdaps highlight httpd iconv icq icu idn ieee1394 imagemagick imap imlib innodb inotify ipod ipv6 jabber java java5 java6 javascript jingle joystick jpeg jpeg2k kpathsea lame lapack laptop latex latex3 lcms libcaca libnotify lm_sensors lua luatex lzma m17n-lib mad matroska mercurial mime mmx mmxext mng modplug modules mp3 mp4 mpeg mpi mplayer msn mtp mudflap multilib musepack musicbrainz mysql mysqli nautilus ncurses netboot networkmanager nis nls nntp nptl nptlonly nsplugin nss ntp odbc ogg openal openexr opengl openmp openntpd osc oscar pae pam pch pcre pda pdf perl plotutils png policykit posix postgres ppds pppd pulseaudio python qq qt3support qt4 quicktime rar readline recode resolvconf rss rtmp ruby samba sasl scanner sdl session simplexml slang sndfile snmp sockets socks5 speex spell sql sqlite sqlite3 sse sse2 sse3 ssl ssse3 subversion svg sysfs system-sqlite t1lib taglib tcl tcpd theora threads tidy tiff timidity tk truetype tta udev unicode upnp usb v4l v4l2 vaapi vala vcd vhosts vim vim-syntax vorbis wav wavepack webkit wicd wifi wlm wma wmf wmp wxwidgets wxwindows x264 x86emu xattr xcb xcomposite xetex xforms xft xine xinerama xml xorg xosd xsl xulrunner xv xvid yahoo zip zlib" ALSA_CARDS="hda-intel" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic auth_digest authn_anon authn_dbd authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache charset_lite dav dav_fs dav_lock dbd deflate dir disk_cache env expires ext_filter file_cache filter headers ident imagemap include info log_config logio mem_cache mime mime_magic negotiation proxy proxy_ajp proxy_balancer proxy_connect proxy_http rewrite setenvif so speling status unique_id userdir usertrack vhost_alias" APACHE2_MPMS="worker" CALLIGRA_FEATURES="braindump flow karbon kexi kpresenter krita tables words" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" DRACUT_MODULES="plymouth lvm gensplash crypt syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="evdev joystick keyboard mouse synaptics wacom" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="en ja zh zh_CN zh_TW en_US en_GB" NETBEANS_MODULES="cnd php mobility websvccommon apisupport java ide harness nb dlight enterprise profiler" PHP_TARGETS="php5-3" RUBY_TARGETS="ruby18%*" USERLAND="GNU" VIDEO_CARDS="intel i915 vesa vga fbdev v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" 
Unset:  CPPFLAGS, CTARGET, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Comment 1 Mathieu Z 2011-07-07 03:54:11 UTC
Created attachment 279293 [details]
build.log
Comment 2 Agostino Sarubbo gentoo-dev 2011-07-07 11:13:07 UTC
have you tried lafilefixer --justfixit ?
Comment 3 Mathieu Z 2011-07-08 05:45:11 UTC
(In reply to comment #2)
> have you tried lafilefixer --justfixit ?

Either that or MAKEOPTS="" fixed it.