'emerge gpscorrelate' fails with: ... x86_64-pc-linux-gnu-g++ -Wl,-O1 -Wl,--as-needed -o gpscorrelate-gui main-gui.o gui.o unixtime.o gpx-read.o correlate.o exif-gps.o /usr/lib64 -pthread -lxml2 -lgtk-x11-2.0 -lgdk-x11-2.0 -latk-1.0 -lgio-2.0 -lpangoft2-1.0 -lpangocairo-1.0 -lgdk_pixbuf-2.0 -lm -lcairo -lpng14 -lpango-1.0 -lfreetype -lfontconfig -lgobject-2.0 -lgmodule-2.0 -lgthread-2.0 -lrt -lglib-2.0 -lm -lexiv2 /usr/lib64: file not recognized: Is a directory collect2: ld returned 1 exit status If I run 'MAKEOPTS="-j1" emerge -vuDN1 gpscorrelate' it fails with: ... x86_64-pc-linux-gnu-g++ -Wl,-O1 -Wl,--as-needed -o gpscorrelate main-command.o unixtime.o gpx-read.o correlate.o exif-gps.o /usr/lib64 -pthread -lxml2 -lgtk-x11-2.0 -lgdk-x11-2.0 -latk-1.0 -lgio-2.0 -lpangoft2-1.0 -lpangocairo-1.0 -lgdk_pixbuf-2.0 -lm -lcairo -lpng14 -lpango-1.0 -lfreetype -lfontconfig -lgobject-2.0 -lgmodule-2.0 -lgthread-2.0 -lrt -lglib-2.0 -lm -lexiv2 /usr/lib64: file not recognized: Is a directory collect2: ld returned 1 exit status make: *** [gpscorrelate] Error 1 Reproducible: Always root@lynx:/root(4)# emerge --info =sci-geosciences/gpscorrelate-1.6.1 Portage 2.1.10 (default/linux/amd64/10.0/desktop, gcc-4.5.2, glibc-2.13-r2, 2.6.39-gentoo x86_64) ================================================================= System Settings ================================================================= System uname: Linux-2.6.39-gentoo-x86_64-Intel-R-_Core-TM-2_Duo_CPU_T8300_@_2.40GHz-with-gentoo-2.0.2 Timestamp of tree: Tue, 07 Jun 2011 11:00:01 +0000 app-shells/bash: 4.2_p10 dev-java/java-config: 2.1.11-r3 dev-lang/python: 2.7.1-r1, 3.2 dev-util/cmake: 2.8.4-r1 sys-apps/baselayout: 2.0.2 sys-apps/openrc: 0.8.2-r1 sys-apps/sandbox: 2.5 sys-devel/autoconf: 2.13, 2.68 sys-devel/automake: 1.9.6-r3, 1.10.3, 1.11.1-r1 sys-devel/binutils: 2.21 sys-devel/gcc: 4.5.2 sys-devel/gcc-config: 1.4.1-r1 sys-devel/libtool: 2.4-r1 sys-devel/make: 3.82 sys-kernel/linux-headers: 2.6.38 (virtual/os-headers) sys-libs/glibc: 2.13-r2 Repositories: gentoo lordvan x11 java-overlay sunrise arcon science proaudio qting-edge ibormuth local x-cpan g-octave ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="* -@EULA PUEL dlj-1.1 skype-eula googleearth AdobeFlash-10.1 cadsoft" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=nocona -O2 -pipe -fomit-frame-pointer" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt /usr/share/maven-bin-3.0/conf /usr/share/openvpn/easy-rsa /var/lib/hsqldb" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.2/ext-active/ /etc/php/apache2-php5.3/ext-active/ /etc/php/cgi-php5.2/ext-active/ /etc/php/cgi-php5.3/ext-active/ /etc/php/cli-php5.2/ext-active/ /etc/php/cli-php5.3/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-march=nocona -O2 -pipe -fomit-frame-pointer" DISTDIR="/usr/portage/distfiles" FEATURES="assume-digests binpkg-logs distlocks ebuild-locks fixlafiles fixpackages news parallel-fetch protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch" FFLAGS="-march=nocona -O2 -pipe -fomit-frame-pointer" GENTOO_MIRRORS="http://linux.rz.ruhr-uni-bochum.de/download/gentoo-mirror http://ftp-stud.fht-esslingen.de/pub/Mirrors/gentoo/ ftp://ftp.wh2.tu-dresden.de/pub/mirrors/gentoo ftp://sunsite.informatik.rwth-aachen.de/pub/Linux/gentoo ftp://ftp.tu-clausthal.de/pub/linux/gentoo ftp://ftp.easynet.nl/mirror/gentoo/ " LANG="en_US.UTF-8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" LINGUAS="de fr" MAKEOPTS="-j3" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/var/lib/layman/lordvan /var/lib/layman/x11 /var/lib/layman/java-overlay /var/lib/layman/sunrise /var/lib/layman/arcon /var/lib/layman/science /var/lib/layman/pro-audio /var/lib/layman/qting-edge /var/lib/layman/ibormuth /usr/local/portage /var/lib/cpan /var/lib/g-octave" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="64bit R X Xaw3d a52 aac abiword acl acpi admin afs alsa amd64 ao apache2 applet archive arpack asf aspell assistant audacious audiofile automap automount bash-completion beagle berkdb blas blast bluetooth boo boost branding bzip2 cairo cardbus cdda cddb cdf cdio cdparanoia cdr cg cgi chm cli consolekit corba cracklib crypt css cuda cups curl cxx daap db dbase dbi dbm dbus declarative designer devhelp device-mapper dga dia djvu doc dri ds2490 ds9097 ds9097u dts dv dvb dvd dvdr dvi dynamicplugin eds elf emacs emboss emf encode epiphany evo examples exif expat extensions extra extras fam fame ffmpeg fftw firefox fits flac fltk fontconfig foomaticdb fortran fortran95 fpx fts3 fuse galago garmin gcj gd gdal gdbm gdu gedit geoip geolocation geos gfortran gif gimp ginac git glade glib gml gmp gmtsuppl gnome gnome-keyring gnome-print gnuplot gnutls gphoto2 gpm grammar graphics graphtft graphviz grass gs gsl gsm gstreamer gtk guile harness hddtemp hdf hdf5 hdri http httpd hvm iconv icq icu id3 ide imagemagick imap innodb inotify ipod ipv6 irda ithreads jabber jadetex java java6 jbig john jpeg jpeg2k kdrive kerberos kpathsea kqemu kvm ladspa lame lapack laptop latex latex3 lcms ldap lensfun libffi libgda libnotify libsamplerate lirc lua lzo mad mail maildir mapnik math matroska mkl mmx mmxext mng modules mono moonlight motif mozilla mp3 mp4 mpeg mpi mpi-threads mplayer mtp mudflap multilib musicbrainz mysql mysqli nautilus ncurses neXt netcdf netpbm network networking networkmanager nfs nls nntp nptl nptlonly nsplugin ntfs ntp numpy obex objc ocaml octave odbc ogdi ogg ole openexr opengl openmp overview pae pam pango pcre pda pdf perl plotutils plugins png podcast policykit portaudio posix postgres postscript ppds pppd preview-latex proj projectx pstricks pulseaudio python python-bindings q16 q32 qemu qhull qt3support qt4 quicktime readline reiserfs reports rle romio rpc rrdcgi rrdtool samba sasl science sdk sdl secure-delete semantic-desktop server session sip slang slp smbclient smp sms sndfile snmp soup sox speex spell sql sqlite sse sse2 sse4 ssl ssse3 startup-notification stlport subtitles subversion suexec svg svm swig sysfs szip t1lib tcl tcpd tex tex4ht texmacs tgif theora thinkpad threads thunderbird tidy tiff tk tntc tools truetype udev unicode usb userlocales utempter v4l2 video virtualbox vorbis wav webdav webdav-serf webkit wifi wmf wxwidgets x264 xattr xcb xemacs xext xine xml xmlreader xmlrpc xorg xpm xulrunner xv xvid xvmc yaml zlib zvbi" ALSA_CARDS="intel8x0" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic auth_digest authn_anon authn_dbd authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgid dav dav_fs dav_lock dbd deflate dir disk_cache env expires ext_filter file_cache filter headers ident imagemap include info log_config logio mem_cache mime mime_magic negotiation proxy proxy_ajp proxy_balancer proxy_connect proxy_http rewrite setenvif so speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="braindump flow karbon kexi kpresenter krita tables words" CAMERAS="canon" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" DVB_CARDS="usb-wt220u" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="keyboard mouse evdev synaptics" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="de fr" NETBEANS_MODULES="apisupport cnd dlight enterprise ergonomics groovy gsf harness ide identity j2ee java mobility nb php profiler ruby websvccommon xml" PHP_TARGETS="php5-3" QEMU_SOFTMMU_TARGETS="i386 ppc ppc64 x86_64" QEMU_USER_TARGETS="arm i386 x86_64" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="nv nouveau vesa" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Created attachment 276139 [details] /var/tmp/portage/sci-geosciences/gpscorrelate-1.6.1/temp/build.log
I wonder where that /usr/lib64 comes from. Could you run: pkg-config --libs libxml-2.0 pkg-config --libs gtk+-2.0 on your system and post the results here?
root@lynx:/root(2)# pkg-config --libs gtk+-2.0 -pthread -lgtk-x11-2.0 -lgdk-x11-2.0 -latk-1.0 -lgio-2.0 -lpangoft2-1.0 -lpangocairo-1.0 -lgdk_pixbuf-2.0 -lm -lcairo -lpng14 -lpango-1.0 -lfreetype -lfontconfig -lgobject-2.0 -lgmodule-2.0 -lgthread-2.0 -lrt -lglib-2.0 root@lynx:/root(3)# pkg-config --libs libxml-2.0 -lxml2 root@lynx:/root(4)# pkg-config --libs gtk+-2.0 -pthread -lgtk-x11-2.0 -lgdk-x11-2.0 -latk-1.0 -lgio-2.0 -lpangoft2-1.0 -lpangocairo-1.0 -lgdk_pixbuf-2.0 -lm -lcairo -lpng14 -lpango-1.0 -lfreetype -lfontconfig -lgobject-2.0 -lgmodule-2.0 -lgthread-2.0 -lrt -lglib-2.0 root@lynx:/root(5)#
Hmpf, everything OK. Anyway i redo the make patch to support optional gtk properly, could you sync your tree and try to compile it again? To confirm that you have the latest version (rsyncs take some time to grab it from cvs) the ebuild should contain BUILD_GUI=1 somewhere in it.
Hi Tomáš, I have now the new ebuild: root@lynx:/root(18)# grep BUILD_GUI /usr/portage/sci-geosciences/gpscorrelate/gpscorrelate-1.6.1.ebuild use gtk && opts+=" gpscorrelate-gui BUILD_GUI=1" And 'emerge gpscorrelate' fails with: root@lynx:/root(20)# emerge -vD gpscorrelate x86_64-pc-linux-gnu-gcc -c -o gui.o gui.c -march=nocona -O2 -pipe -fomit-frame-pointer -I/usr/include/libxml2 -I/usr/include/exiv2 -pthread -DQT_SHARED -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng14 -I/usr/include/qt4 -I/usr/include/qt4/QtGui -I/usr/include/libdrm -I/usr/include/qt4/QtCore xsltproc http://docbook.sourceforge.net/release/xsl/current/manpages/docbook.xsl doc/gpscorrelate-manpage.xml gui.c: In function ‘SaveSettings’: gui.c:202:8: warning: ignoring return value of ‘fwrite’, declared with attribute warn_unused_result x86_64-pc-linux-gnu-g++ -Wl,-O1 -Wl,--as-needed main-command.o unixtime.o gpx-read.o correlate.o exif-gps.o /usr/lib64 -lxml2 -lm -lexiv2 -lstdc++ -pthread -lgtk-x11-2.0 -lgdk-x11-2.0 -latk-1.0 -lgio-2.0 -lpangoft2-1.0 -lpangocairo-1.0 -lgdk_pixbuf-2.0 -lm -lcairo -lpng14 -lpango-1.0 -lfreetype -lfontconfig -lgobject-2.0 -lgmodule-2.0 -lgthread-2.0 -lrt -lglib-2.0 -o gpscorrelate Note: meta source : no *info/productname or alternative gpscorrelate Note: meta source : see http://docbook.sf.net/el/productname gpscorrelate Note: meta source : no refentry/refmeta/refmiscinfo@class=source gpscorrelate Note: meta source : see http://docbook.sf.net/el/refmiscinfo gpscorrelate Note: meta version: no *info/productnumber or alternative gpscorrelate Note: meta version: see http://docbook.sf.net/el/productnumber gpscorrelate Note: meta version: no refentry/refmeta/refmiscinfo@class=version gpscorrelate Note: meta version: see http://docbook.sf.net/el/refmiscinfo gpscorrelate Warn: meta source : no fallback for source, so inserted a fixme gpscorrelate Note: meta manual : no titled ancestor of refentry gpscorrelate Note: meta manual : no refentry/refmeta/refmiscinfo@class=manual gpscorrelate Note: meta manual : see http://docbook.sf.net/el/refmiscinfo gpscorrelate Warn: meta manual : no fallback for manual, so inserted a fixme gpscorrelate Warn: AUTHOR sect.: no personblurb|contrib for Stefano Zacchiroli gpscorrelate Note: AUTHOR sect.: see see http://docbook.sf.net/el/contrib gpscorrelate Note: AUTHOR sect.: see see http://docbook.sf.net/el/personblurb gpscorrelate Note: Writing gpscorrelate.1 /usr/lib64: file not recognized: Is a directory collect2: ld returned 1 exit status It happens at least on two systems. Regards
The command + variables it uses: $(CXX) $(LDFLAGS) $(COBJS) $(CLIBS) -o $@ CFLAGS += $(shell pkg-config --cflags libxml-2.0) -I/usr/include/exiv2 CXXFLAGS += $(shell pkg-config --cflags libxml-2.0) -I/usr/include/exiv2 CLIBS += $(shell pkg-config --libs libxml-2.0) -lm -lexiv2 -lstdc++ ifdef BUILD_GUI CXXFLAGS += $(shell pkg-config --cflags gtk+-2.0) CFLAGS += $(shell pkg-config --cflags gtk+-2.0) CLIBS += $(shell pkg-config --libs gtk+-2.0) endif COBJS = main-command.o unixtime.o gpx-read.o correlate.o exif-gps.o Wonder what could polute the variables this way so there shows the /usr/lib64/.
If we cut your command apart: x86_64-pc-linux-gnu-g++ -Wl,-O1 -Wl,--as-needed main-command.o unixtime.o gpx-read.o correlate.o exif-gps.o /usr/lib64 -lxml2 -lm -lexiv2 -lstdc++ -pthread -lgtk-x11-2.0 -lgdk-x11-2.0 -latk-1.0 -lgio-2.0 -lpangoft2-1.0 -lpangocairo-1.0 -lgdk_pixbuf-2.0 -lm -lcairo -lpng14 -lpango-1.0 -lfreetype -lfontconfig -lgobject-2.0 -lgmodule-2.0 -lgthread-2.0 -lrt -lglib-2.0 -o gpscorrelate COBJS = main-command.o unixtime.o gpx-read.o correlate.o exif-gps.o CXX = x86_64-pc-linux-gnu-g++ LDFLAGS = -Wl,-O1 -Wl,--as-needed CLIBS = -lxml2 -lm -lexiv2 -lstdc++ -pthread -lgtk-x11-2.0 -lgdk-x11-2.0 -latk-1.0 -lgio-2.0 -lpangoft2-1.0 -lpangocairo-1.0 -lgdk_pixbuf-2.0 -lm -lcairo -lpng14 -lpango-1.0 -lfreetype -lfontconfig -lgobject-2.0 -lgmodule-2.0 -lgthread-2.0 -lrt -lglib-2.0 $@ = gpscorrelate UNKNOWN = /usr/lib64
Could you try to edit files/gpscorrelate-1.6.1-makefile.patch and on the line 15 remove the + char so it looks like and retry? +CLIBS = $(shell pkg-config --libs libxml-2.0) -lm -lexiv2 -lstdc++
Hi Tomáš, the patch worked for me. Thank you.
Commited to main tree. Thanks for report and help finding the issue.
