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Bug 369011 - 'emerge po4a' eats all cpu resources and does not finish, now with po4a-0.41
Summary: 'emerge po4a' eats all cpu resources and does not finish, now with po4a-0.41
Status: RESOLVED WORKSFORME
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: [OLD] Unspecified (show other bugs)
Hardware: All Linux
: Normal normal
Assignee: Gentoo Perl team
URL:
Whiteboard:
Keywords:
Depends on:
Blocks: 269650 275268
  Show dependency tree
 
Reported: 2011-05-28 11:01 UTC by Juergen Rose
Modified: 2011-05-29 08:05 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


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Description Juergen Rose 2011-05-28 11:01:41 UTC
'emerge po4a' runs now almost 4 days with 94 % of cpu and does not finish. Currently this happens on two systems.

root@grizzly:/root(5)# genlop -t po4a | tail

     Fri Jul 16 12:05:39 2010 >>> app-text/po4a-0.39
       merge time: 33 seconds.

     Sat Jul 17 13:16:19 2010 >>> app-text/po4a-0.39
       merge time: 31 seconds.

     Wed Oct 20 08:58:56 2010 >>> app-text/po4a-0.40.1
       merge time: 40 seconds.

root@grizzly:/root(6)# ps -ef | grep po4a | grep -v grep
root      8752 13778  0 May24 ?        00:00:00 [app-text/po4a-0.41] sandbox "/usr/lib64/portage/bin/ebuild.sh" compile
root      8822  8782  0 May24 ?        00:00:00 /bin/sh ./share/po4a-build -f po4a-build.conf
root      8886  8822 94 May24 ?        4-02:54:12 perl /var/tmp/portage/app-text/po4a-0.41/work/po4a-0.41/po4a _build/po4a.config
root@grizzly:/root(7)# emerge -pvD po4a 

These are the packages that would be merged, in order:

Calculating dependencies... done!
[ebuild     U ] app-text/po4a-0.41 [0.40.1] USE="-test" 0 kB

Total: 1 package (1 upgrade), Size of downloads: 0 kB

 * Iroot@grizzly:/root(5)# genlop -t po4a | tail

     Fri Jul 16 12:05:39 2010 >>> app-text/po4a-0.39
       merge time: 33 seconds.

     Sat Jul 17 13:16:19 2010 >>> app-text/po4a-0.39
       merge time: 31 seconds.

     Wed Oct 20 08:58:56 2010 >>> app-text/po4a-0.40.1
       merge time: 40 seconds.

root@grizzly:/root(6)# ps -ef | grep po4a | grep -v grep
root      8752 13778  0 May24 ?        00:00:00 [app-text/po4a-0.41] sandbox "/usr/lib64/portage/bin/ebuild.sh" compile
root      8822  8782  0 May24 ?        00:00:00 /bin/sh ./share/po4a-build -f po4a-build.conf
root      8886  8822 94 May24 ?        4-02:54:12 perl /var/tmp/portage/app-text/po4a-0.41/work/po4a-0.41/po4a _build/po4a.config
root@grizzly:/root(7)# emerge -pvD po4a 

These are the packages that would be merged, in order:

Calculating dependencies... done!
[ebuild     U ] app-text/po4a-0.41 [0.40.1] USE="-test" 0 kB

Total: 1 package (1 upgrade), Size of downloads: 0 kB


root@condor:/root(5)# ps -ef | grep po4a  | grep -v grep
root      4746 29622  0 May27 pts/2    00:00:00 [app-text/po4a-0.41] sandbox "/usr/lib64/portage/bin/ebuild.sh" compile
root      4823  4777  0 May27 pts/2    00:00:00 /bin/sh ./share/po4a-build -f po4a-build.conf
root      4891  4823 99 May27 pts/2    1-03:58:08 perl /var/tmp/portage/app-text/po4a-0.41/work/po4a-0.41/po4a _build/po4a.config


In the last days this has happened on several other systems until I kill the perl processes. I suppose it is a similar bug as Bug 269650. Also on my system the ouput of 'emerge -uvDN world' is redirected.




Reproducible: Always




root@grizzly:/root(8)# emerge --info
Portage 2.1.9.49 (default/linux/amd64/10.0/desktop, gcc-4.5.2, glibc-2.13-r2, 2.6.39 x86_64)
=================================================================
System uname: Linux-2.6.39-x86_64-AMD_Athlon-tm-_64_Processor_3200+-with-gentoo-2.0.2
Timestamp of tree: Tue, 24 May 2011 22:30:01 +0000
app-shells/bash:          4.2_p10
dev-java/java-config:     2.1.11-r3
dev-lang/python:          2.7.1-r1, 3.2
dev-util/cmake:           2.8.4-r1
sys-apps/baselayout:      2.0.2
sys-apps/openrc:          0.8.2-r1
sys-apps/sandbox:         2.5
sys-devel/autoconf:       2.13, 2.68
sys-devel/automake:       1.9.6-r3, 1.10.3, 1.11.1-r1
sys-devel/binutils:       2.21
sys-devel/gcc:            4.5.2
sys-devel/gcc-config:     1.4.1-r1
sys-devel/libtool:        2.4-r1
sys-devel/make:           3.82
sys-kernel/linux-headers: 2.6.38 (virtual/os-headers)
sys-libs/glibc:           2.13-r2
ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA PUEL dlj-1.1 skype-eula googleearth AdobeFlash-10.1 cadsoft"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -march=k8"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt /usr/share/maven-bin-3.0/conf /usr/share/openvpn/easy-rsa /var/lib/hsqldb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.2/ext-active/ /etc/php/apache2-php5.3/ext-active/ /etc/php/cgi-php5.2/ext-active/ /etc/php/cgi-php5.3/ext-active/ /etc/php/cli-php5.2/ext-active/ /etc/php/cli-php5.3/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-O2 -march=k8"
DISTDIR="/usr/portage/distfiles"
FEATURES="assume-digests binpkg-logs distlocks fixlafiles fixpackages news parallel-fetch protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch"
FFLAGS="-O2 -march=k8"
GENTOO_MIRRORS="http://linux.rz.ruhr-uni-bochum.de/download/gentoo-mirror http://ftp-stud.fht-esslingen.de/pub/Mirrors/gentoo/ ftp://ftp.wh2.tu-dresden.de/pub/mirrors/gentoo ftp://sunsite.informatik.rwth-aachen.de/pub/Linux/gentoo ftp://ftp.tu-clausthal.de/pub/linux/gentoo ftp://ftp.easynet.nl/mirror/gentoo/ "
LANG="en_US.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
LINGUAS="de fr"
MAKEOPTS="-j1"
PKGDIR="/usr/portage/packages/"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/var/lib/layman/java-overlay /var/lib/layman/lordvan /var/lib/layman/science /var/lib/layman/x11 /var/lib/layman/sunrise /var/lib/layman/arcon /usr/local/portage /var/lib/cpan /var/lib/g-octave"
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="3dnow 3dnowext 64bit R X Xaw3d a52 aac abiword acl acpi admin afs alsa amd64 ao apache2 applet archive arpack asf aspell assistant audacious audiofile automap automount bash-completion beagle berkdb blas blast bluetooth boo boost branding bzip2 cairo cdda cddb cdf cdio cdparanoia cdr cgi chm cli consolekit corba cracklib crypt css cups curl cxx daap db dbase dbi dbm dbus declarative designer devhelp device-mapper dga dia djvu doc dri ds2490 ds9097 ds9097u dts dv dvb dvd dvdr dvi dynamicplugin eds elf emacs emboss emf encode epiphany evo examples exif expat extensions extra extras fam fame ffmpeg fftw firefox fits flac fltk fontconfig foomaticdb fortran fortran95 fpx fts3 fuse galago garmin gd gdal gdbm gdu gedit geoip geolocation geos gfortran gif gimp ginac git glade glib gml gmp gmtsuppl gnome gnome-keyring gnome-print gnuplot gnutls gphoto2 gpm grammar graphics graphtft graphviz grass gs gsl gsm gstreamer gtk guile harness hddtemp hdf hdf5 hdri http httpd iconv icq icu id3 ide imagemagick imap innodb inotify ipod ipv6 irda ithreads jabber jadetex java java6 jbig john jpeg jpeg2k kde kdrive kerberos kpathsea ladspa lame lapack latex latex3 lcms ldap lensfun libffi libgda libnotify libsamplerate lirc lm_sensors lua lzo mad mail maildir mapnik math matroska mkl mmx mmxext mng modules mono moonlight motif mozilla mp3 mp4 mpeg mpi mplayer mtp mudflap multilib musicbrainz mysql mysqli nautilus ncurses neXt netcdf netpbm network networking networkmanager nfs nls nntp nptl nptlonly nsplugin ntfs ntp numpy obex objc ocaml octave odbc ogdi ogg ole openexr opengl openmp overview pae pam pango pcre pda pdf perl plotutils plugins png podcast policykit posix postgres postscript ppds pppd preview-latex proj projectx pstricks pulseaudio python python-bindings q16 q32 qemu qhull qt3support qt4 quicktime readline reiserfs reports rle romio rpc rrdcgi rrdtool samba sasl science sdk sdl secure-delete semantic-desktop server session sip slang slp smbclient sms sndfile snmp soup sox speex spell sql sqlite sse sse2 ssl startup-notification stlport subtitles subversion suexec svg svm swig sysfs szip t1lib tcl tcpd tex tex4ht texmacs tgif theora threads thunderbird tidy tiff tk tntc tools truetype udev unicode usb userlocales utempter v4l2 video virtualbox vorbis wav webdav webdav-serf webkit wmf wxwidgets x264 xattr xcb xemacs xext xine xml xmlreader xmlrpc xorg xpm xulrunner xv xvid xvmc yaml zlib zvbi" ALSA_CARDS="intel8x0" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic auth_digest authn_anon authn_dbd authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgid dav dav_fs dav_lock dbd deflate dir disk_cache env expires ext_filter file_cache filter headers ident imagemap include info log_config logio mem_cache mime mime_magic negotiation proxy proxy_ajp proxy_balancer proxy_connect proxy_http rewrite setenvif so speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="braindump flow karbon kexi kpresenter krita tables words" CAMERAS="canon" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" DVB_CARDS="tda10046 saa7134" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="de fr" LIRC_DEVICES="hauppauge_dvb" NETBEANS_MODULES="apisupport cnd dlight enterprise ergonomics groovy gsf harness ide identity j2ee java mobility nb php profiler ruby websvccommon xml" PHP_TARGETS="php5-3" QEMU_SOFTMMU_TARGETS="i386 ppc ppc64 x86_64" QEMU_USER_TARGETS="arm i386 x86_64" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="radeon vesa" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" 
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Comment 1 Michael Orlitzky gentoo-dev 2011-05-28 17:19:54 UTC
Confirmed on an otherwise mostly-stable amd64. Command used to reproduce:

  $ sudo ACCEPT_KEYWORDS="~amd64" emerge -1 po4a &>~/foo.txt
Comment 2 Torsten Veller (RETIRED) gentoo-dev 2011-05-29 08:05:31 UTC
I have added a patch like https://bugs.gentoo.org/attachment.cgi?id=203139 to po4a-0.41 again.

Still I don't understand what and why it happens.