>>> Emerging (3 of 4) sci-libs/gsl-1.14 * gsl-1.14.tar.gz RMD160 SHA1 SHA256 size ;-) ... [ ok ] * Package: sci-libs/gsl-1.14 * Repository: gentoo * Maintainer: sci@gentoo.org * USE: amd64 elibc_glibc kernel_linux multilib test userland_GNU * FEATURES: sandbox test !!! Error: File "//etc/env.d/cblas/lib64/reference" is missing! Call stack: * iface_do_show (skel.bash:129) * do_show (skel.bash:269) * check_do (core.bash:24) * do_action (core.bash:89) * main (eselect:191) exiting >>> Unpacking source... >>> Unpacking gsl-1.14.tar.gz to /tmp/portage/sci-libs/gsl-1.14/work >>> Source unpacked in /tmp/portage/sci-libs/gsl-1.14/work >>> Preparing source in /tmp/portage/sci-libs/gsl-1.14/work/gsl-1.14 ... Portage 2.1.9.42 (default/linux/amd64/10.0, gcc-4.4.5, libc-0-r0, 2.6.37-gentoo-r4 x86_64) ================================================================= System uname: Linux-2.6.37-gentoo-r4-x86_64-Intel-R-_Core-TM-_i3_CPU_540_@_3.07GHz-with-gentoo-2.0.2 Timestamp of tree: Sun, 15 May 2011 00:30:02 +0000 app-shells/bash: 4.1_p9 dev-java/java-config: 2.1.11-r3 dev-lang/python: 2.7.1-r1, 3.1.3-r1, 3.2 dev-util/cmake: 2.8.4-r1 sys-apps/baselayout: 2.0.2 sys-apps/openrc: 0.8.2-r1 sys-apps/sandbox: 2.4 sys-devel/autoconf: 2.13, 2.65-r1 sys-devel/automake: 1.9.6-r3, 1.10.3, 1.11.1 sys-devel/binutils: 2.20.1-r1 sys-devel/gcc: 4.4.5 sys-devel/gcc-config: 1.4.1-r1 sys-devel/libtool: 2.2.10 sys-devel/make: 3.81-r2 sys-kernel/linux-headers: 2.6.36.1 sys-libs/glibc: 2.12.2 virtual/os-headers: 0 ACCEPT_KEYWORDS="amd64" ACCEPT_LICENSE="*" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=native -O2 -g0" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/eselect/postgresql /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-march=native -O2" DISTDIR="/media/sources" FEATURES="assume-digests binpkg-logs collision-protect distlocks fixlafiles fixpackages multilib-strict news parallel-fetch protect-owned sandbox sfperms split-log strict test unknown-features-warn unmerge-logs unmerge-orphans userfetch" FFLAGS="" GENTOO_MIRRORS="http://distfiles.gentoo.org" LANG="it_IT.UTF-8" LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu" LINGUAS="zh af ca cs da de el es et fr gl hr hu it nb nl pl pt ro ru sk sl sv uk bg cy en eo fo ga he id ku lt lv mk ms nn sw tn zu ja zh_TW en_GB pt_BR ko zh_CN ar en_CA fi kk oc sr tr fa wa nds as be bn bn_BD bn_IN en_US es_AR es_CL es_ES es_MX eu fy fy_NL ga_IE gu gu_IN hi hi_IN is ka kn ml mr nb_NO nn_NO or pa pa_IN pt_PT rm si sq sv_SE ta ta_LK te th vi ast dz km my om sh ug uz ca@valencia sr@ijekavian sr@ijekavianlatin sr@latin csb hne mai se es_LA fr_CA zh_HK br la no es_CR et_EE sr_CS bo hsb hy mn sr@Latn lb ne bs tg uz@cyrillic xh be_BY brx ca_XV dgo en_ZA gd kok ks ky lo mni nr ns pap ps rw sa_IN sat sd ss st sw_TZ ti ts ve mt ia" MAKEOPTS="-j4" PKGDIR="/media/sources/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/usr/local/portage" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="X acl acpi alsa amd64 apache2 assistant bash-completion berkdb bzip2 cairo cd cdr cli cracklib crypt cuda cups curl cxx dbus device-mapper dri dvd dvdr encode extensions extras ffmpeg fontconfig fortran gdbm gnutls gpm gstreamer gtk iconv icu imagemagick imap ipv6 ithreads jadetex jpeg kde lame mmx modules mp3 mudflap multilib mysql ncurses nls nptl nptlonly nsplugin ogg opengl openmp pam pcre pdo perl png policykit postgres pppd private-headers python qt3support qt4 readline sasl sdl semantic-desktop session sqlite sse sse2 ssl svg symlink sysfs tcpd threads tk truetype unicode v4l v4l2 vhosts vorbis webcam xcb xorg zlib zsh-completion" ALSA_CARDS="hda-intel" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="mouse evdev keyboard" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="zh af ca cs da de el es et fr gl hr hu it nb nl pl pt ro ru sk sl sv uk bg cy en eo fo ga he id ku lt lv mk ms nn sw tn zu ja zh_TW en_GB pt_BR ko zh_CN ar en_CA fi kk oc sr tr fa wa nds as be bn bn_BD bn_IN en_US es_AR es_CL es_ES es_MX eu fy fy_NL ga_IE gu gu_IN hi hi_IN is ka kn ml mr nb_NO nn_NO or pa pa_IN pt_PT rm si sq sv_SE ta ta_LK te th vi ast dz km my om sh ug uz ca@valencia sr@ijekavian sr@ijekavianlatin sr@latin csb hne mai se es_LA fr_CA zh_HK br la no es_CR et_EE sr_CS bo hsb hy mn sr@Latn lb ne bs tg uz@cyrillic xh be_BY brx ca_XV dgo en_ZA gd kok ks ky lo mni nr ns pap ps rw sa_IN sat sd ss st sw_TZ ti ts ve mt ia" NGINX_MODULES_HTTP="access auth_basic autoindex browser charset empty_gif fastcgi geo gzip limit_req limit_zone map memcached proxy referer rewrite scgi split_clients ssi upstream_ip_hash userid uwsgi addition cache_purge dav degradation flv geoip gzip_static headers_more image_filter passenger perl push random_index realip secure_link stub_status sub xslt" NGINX_MODULES_MAIL="imap pop3 smtp" PHP_TARGETS="php5-3" QEMU_SOFTMMU_TARGETS="i386 x86_64" QEMU_USER_TARGETS="i386 x86_64" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="nvidia" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
I hit a similar message when re-installing sci-libs/lapack-reference-3.1.1-r1: >>> Completed installing lapack-reference-3.1.1-r1 into /var/tmp/portage/sci-libs/lapack-reference-3.1.1-r1/image/ strip: x86_64-pc-linux-gnu-strip --strip-unneeded -R .comment -R .GCC.command.line usr/lib64/lapack/reference/liblapack.so.0.0.0 usr/lib64/lapack/reference/liblapack.a >>> Installing (1 of 1) sci-libs/lapack-reference-3.1.1-r1 !!! Error: File "//etc/env.d/lapack/lib64/atlas" is missing! Call stack: * iface_do_show (skel.bash:129) * do_show (skel.bash:269) * check_do (core.bash:24) * do_action (core.bash:89) * main (eselect:197) exiting * lapack has been eselected to reference * Messages for package sci-libs/lapack-reference-3.1.1-r1: * lapack has been eselected to reference >>> Auto-cleaning packages... >>> No outdated packages were found on your system.
I have just encountered the same error message for sci-libs/gsl-1.16-r2
