'emerge kdelibs' hangs at: ... Patching output file 692/700 Patching output file 693/700 Patching output file 694/700 Patching output file 695/700 Patching output file 696/700 Patching output file 697/700 Patching output file 698/700 Patching output file 699/700 Patching output file 700/700 finished... Top shows that doxygen works with more than 90% CPU for more than 10 hours: Swap: 8385920k total, 158364k used, 8227556k free, 827980k cached PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+ COMMAND 22756 root 20 0 155m 126m 4060 R 93.1 8.3 654:54.48 doxygen Reproducible: Always root@cheetah:/usr/local/portage/media-video(44)# emerge --info =kdelibs-4.6.2-r2 Portage 2.1.9.45 (!../home_cheetah/ftp/pub/portage/profiles/default/linux/x86/10.0/desktop, gcc-4.5.2, glibc-2.13-r2, 2.6.38.2 i686) ================================================================= System Settings ================================================================= System uname: Linux-2.6.38.2-i686-AMD_Athlon-tm-_XP_1800+-with-gentoo-2.0.2 Timestamp of tree: Tue, 12 Apr 2011 02:00:01 +0000 ccache version 3.1.4 [disabled] app-shells/bash: 4.2_p8 dev-java/java-config: 2.1.11-r3 dev-lang/python: 2.6.6-r2, 2.7.1-r1, 3.1.3-r1 dev-util/ccache: 3.1.4 dev-util/cmake: 2.8.4 sys-apps/baselayout: 2.0.2 sys-apps/openrc: 0.8.0 sys-apps/sandbox: 2.5 sys-devel/autoconf: 2.13, 2.68 sys-devel/automake: 1.9.6-r3, 1.10.3, 1.11.1-r1 sys-devel/binutils: 2.21 sys-devel/gcc: 4.5.2 sys-devel/gcc-config: 1.4.1 sys-devel/libtool: 2.4-r1 sys-devel/make: 3.82 virtual/os-headers: 2.6.38 (sys-kernel/linux-headers) ACCEPT_KEYWORDS="x86 ~x86" ACCEPT_LICENSE="* -@EULA PUEL dlj-1.1 skype-eula googleearth AdobeFlash-10.1 cadsoft" CBUILD="i686-pc-linux-gnu" CFLAGS="-O2 -march=athlon-xp -fomit-frame-pointer" CHOST="i686-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt /usr/share/maven-bin-3.0/conf /usr/share/openvpn/easy-rsa /var/lib/hsqldb" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/eselect/compiler /etc/eselect/postgresql /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.2/ext-active/ /etc/php/apache2-php5.3/ext-active/ /etc/php/cgi-php5.2/ext-active/ /etc/php/cgi-php5.3/ext-active/ /etc/php/cli-php5.2/ext-active/ /etc/php/cli-php5.3/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-O2 -march=athlon-xp -fomit-frame-pointer" DISTDIR="/usr/portage/distfiles" FEATURES="assume-digests binpkg-logs distlocks fixlafiles fixpackages news parallel-fetch protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch" FFLAGS="-O2 -march=athlon-xp -fomit-frame-pointer" GENTOO_MIRRORS="http://distfiles.gentoo.org" LANG="en_US.UTF-8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" LINGUAS="de fr" MAKEOPTS="-j1" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/var/lib/layman/java-overlay /var/lib/layman/x11 /var/lib/layman/sunrise /var/lib/layman/science /var/lib/layman/pro-audio /var/lib/layman/n4g /usr/local/portage /var/lib/cpan /var/lib/g-octave" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="3dnow 3dnowext R X Xaw3d a52 aac abiword acl acpi admin afs alsa ao apache2 applet archive arpack asf aspell assistant audacious audiofile automap automount bash-completion beagle berkdb blas blast bluetooth boo boost branding bzip2 cairo cardbus cdda cddb cdf cdio cdparanoia cdr cgi chm cli consolekit corba cracklib crypt css cups curl cxx daap db dbase dbi dbm dbus declarative designer devhelp device-mapper dga dia djvu doc dri ds2490 ds9097 ds9097u dts dv dvb dvd dvdr dvi dynamicplugin eds elf emacs emboss emf empathy encode epiphany evo examples exif expat extensions extra extras fam fame ffmpeg fftw firefox fits flac fltk fontconfig foomaticdb fortran fortran95 fpx fts3 fuse galago garmin gd gdal gdbm gdu gedit geoip geolocation geos gfortran gif gimp ginac git glade glib gml gmp gmtsuppl gnokii gnome gnome-keyring gnome-print gnuplot gnutls gphoto2 gpm grammar graphics graphtft graphviz grass gs gsl gsm gstreamer gtk guile harness hddtemp hdf hdf5 hdri http httpd iconv icq icu id3 ide imagemagick imap innodb inotify ipod ipv6 irda ithreads jabber jadetex java java6 jbig john jpeg jpeg2k kdrive kerberos kpathsea ladspa lame lapack latex latex3 lcms ldap lensfun libffi libgda libnotify libsamplerate lirc lm_sensors lua lzo mad mail maildir mapnik math matroska matrox mikmod mkl mmx mmxext mng modules mono moonlight motif mozilla mp3 mp4 mpeg mpi mplayer mtp mudflap musicbrainz mysql mysqli nautilus ncurses neXt netcdf netpbm network networking networkmanager nfs nls nntp nptl nptlonly nsplugin ntfs ntp numpy obex objc ocaml octave odbc ogdi ogg ole openexr opengl openmp overview pae pam pango pcre pda pdf perl plotutils plugins png podcast policykit posix postgres postscript ppds pppd preview-latex proj projectx pstricks pulseaudio pymol python python-bindings q16 q32 qemu qhull qt3support qt4 quicktime readline reiserfs reports rle romio rpc rrdcgi rrdtool samba sasl science sdk sdl secure-delete semantic-desktop server session sip slang slp smbclient sms sndfile snmp soup sox speex spell sql sqlite sse ssl startup-notification stlport subtitles subversion suexec svg svm swig sysfs szip t1lib tcl tcpd tex tex4ht texmacs tgif theora threads thunderbird tidy tiff tk tntc tools truetype udev unicode usb userlocales utempter v4l2 video virtualbox vorbis wav webdav webdav-serf webkit win32codecs wmf wxwidgets x264 x86 xattr xcb xemacs xext xine xml xmlreader xmlrpc xorg xpm xulrunner xv xvid xvmc zlib zvbi" ALSA_CARDS="intel8x0" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic auth_digest authn_anon authn_dbd authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgid dav dav_fs dav_lock dbd deflate dir disk_cache env expires ext_filter file_cache filter headers ident imagemap include info log_config logio mem_cache mime mime_magic negotiation proxy proxy_ajp proxy_balancer proxy_connect proxy_http rewrite setenvif so speling status unique_id userdir usertrack vhost_alias" CAMERAS="canon" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" DVB_CARDS="tda10045 tda10046lifeview" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="de fr" LIRC_DEVICES="hauppauge" NETBEANS_MODULES="apisupport cnd dlight enterprise ergonomics groovy gsf harness ide identity j2ee java mobility nb php profiler ruby websvccommon xml" PHP_TARGETS="php5-3" QEMU_SOFTMMU_TARGETS="i386 ppc ppc64 x86_64" QEMU_USER_TARGETS="arm i386 x86_64" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="mga matrox vesa" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
I think this is a doxygen problem. I've seen it a couple of times with more recent versions. In fact that's when and why I filed bug #360979.
I use doxygen all the time, and these problems are most likely in the configuration file and/or the file encoding of the sources as seen by doxygen and passed to latex (if the doxygen config happens to enable PDF docs). Try either a) updating the config file to the same version as doxygen, b) changing the input encoding flag in the config file from the UTF-8 default to something else, such as CP437 (if the sources are ASCII) or one of the ISO encodings), c) disable latex and just install the html doc format, or d) increase the amount of memory available to latex. It's just a stab in the dark, but the only "hang" I ever see with doxygen is during the "make pdf" part and the culprit is latex... On the other hand, if all the above are true (ie, no latex enabled and just html) and it still hangs somewhere building the docs, then please provide more detailed information. Thanks...
If the error really is latex waiting for input because of character encoding errors (due the default of UTF-8 not being quite correct) then adding this switch to the package's Doxyfile might take care of it: LATEX_SOURCE_CODE = NO This will disable inline highlighted source in the PDF only, which is frequently where these errors originate (due to certain characters in the comments of the source code being parsed by doxygen and then processed by the latex tools). As a workaround it's not a bad one, depending on the specifics of the error.
Using .svg for Dot graphs (not the default) can also lead to excessive processing time for very large graphs. Reverting to .png (or another format) will usually work fine in these situations.
Works fine for kdelibs-4.7.4 and doxygen-1.7.5.1
(In reply to comment #5) > Works fine for kdelibs-4.7.4 and doxygen-1.7.5.1
