Gentoo Websites Logo
Go to: Gentoo Home Documentation Forums Lists Bugs Planet Store Wiki Get Gentoo!
Bug 36030 - Scientific packages that need ~amd64
Summary: Scientific packages that need ~amd64
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: AMD64 Linux
: High normal (vote)
Assignee: AMD64 Project
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2003-12-17 15:21 UTC by Ryan May
Modified: 2004-06-02 04:29 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments

Note You need to log in before you can comment on or make changes to this bug.
Description Ryan May 2003-12-17 15:21:38 UTC
I found some more packages that will at least compile on amd64:

app-sci/vis5d+-1.2.1
app-sci/netcdf-3.5.0-r3
dev-libs/szip-1.1 (needed for hdf)
dev-libs/hdf-4.2.0
dev-libs/hdf5

I have been able to at least execute vis5d+ and some of the netcdf binaries, though I have not actually used them to work with data yet.

Reproducible: Always
Steps to Reproduce:
1.
2.
3.
Comment 1 Daniel Ahlberg (RETIRED) gentoo-dev 2004-02-06 07:58:27 UTC
In CVS, thanks!
Comment 2 Ryan May 2004-02-17 15:57:22 UTC
Ok, as of 2/17/04, I only show these packages marked ~amd64:

dev-libs/hdf-4.2.0(-r1)
app-sci/netcdf-3.5.0-r3

the rest are completely missing any amd64 keywords:

app-sci/vis5d+-1.2.1
dev-libs/szip-1.1
dev-libs/hdf5


Is this intentional, or is 10 days too quick for CVS to filter down?
Comment 3 Ryan May 2004-02-17 20:21:58 UTC
Ok, scratch above comment for dev-libs/szip, I must have overlooked it.

That still leaves:
dev-libs/hdf5
app-sci/vis5d+
Comment 4 Kris Kersey (RETIRED) gentoo-dev 2004-02-18 01:44:48 UTC
app-sci/vis5d+ was already marked ~amd64 for me.  dev-libs/hdf5-1.6.1 has now been marked ~amd64.  It compiled with lots of ugliness but maybe someone will test it.
Comment 5 Patrick Kursawe (RETIRED) gentoo-dev 2004-05-27 23:27:04 UTC
Could you please check what's wrong with hdf4? See bug #52169, I can't reproduce this problem on x86
Comment 6 Danny van Dyk (RETIRED) gentoo-dev 2004-05-28 06:11:17 UTC
I had no problem emerging dev-libs/hdf-4.2.0-r3 on amd64.

Using gcc-3.4.0-r4.
Comment 7 Danny van Dyk (RETIRED) gentoo-dev 2004-05-28 06:14:04 UTC
sorry, using gcc-3.3.3-r5. I forgot i switched profiles before the merge ;-)
Comment 8 Patrick Kursawe (RETIRED) gentoo-dev 2004-06-01 10:31:16 UTC
Danny, could you try 3.4?
Comment 9 Danny van Dyk (RETIRED) gentoo-dev 2004-06-01 14:48:32 UTC
Ok, i can confirm the exact error with gcc-3.4.0-r4. LDFLAGS="-lm" is the proper way to handle it, though I don't know  what triggers this.
Comment 10 Patrick Kursawe (RETIRED) gentoo-dev 2004-06-02 04:21:35 UTC
Ok, it's a gcc 3.4 issue. Can reproduce it on x86 when using 3.4. Sorry for waking you up :-)