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Bug 347187 - sci-visualization/elastix - a toolbox for rigid and nonrigid registration of images
Summary: sci-visualization/elastix - a toolbox for rigid and nonrigid registration of ...
Status: CONFIRMED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: New packages (show other bugs)
Hardware: All Linux
: High enhancement
Assignee: Default Assignee for New Packages
URL: http://elastix.isi.uu.nl/
Whiteboard:
Keywords: EBUILD
Depends on: 124241
Blocks:
  Show dependency tree
 
Reported: 2010-11-29 15:43 UTC by Gert Wollny
Modified: 2013-06-11 10:23 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---


Attachments
Elastix ebuild (elastix-4.4.ebuild,890 bytes, text/plain)
2010-11-29 15:44 UTC, Gert Wollny
Details
Metadata file with description (metadata.xml,504 bytes, text/plain)
2010-11-29 15:58 UTC, Gert Wollny
Details
Correctly disable mevisdicomtiff (elastix-4.6-honour-disabled-mevisdicomtiff.patch,3.43 KB, patch)
2013-06-11 10:19 UTC, Gert Wollny
Details | Diff
Updated ebuild (elastix-4.6.ebuild,1.09 KB, text/plain)
2013-06-11 10:23 UTC, Gert Wollny
Details

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Description Gert Wollny 2010-11-29 15:43:40 UTC
elastix is open source software, based on the Insight Segmentation and Registration Toolkit (ITK). The software consists of a collection of algorithms that are commonly used to solve (medical) image registration problems.

Reproducible: Always

Steps to Reproduce:
Comment 1 Gert Wollny 2010-11-29 15:44:55 UTC
Created attachment 255841 [details]
Elastix ebuild
Comment 2 Gert Wollny 2010-11-29 15:45:44 UTC
Elastix requires the Insight Toolkit to be installed 
Comment 3 Gert Wollny 2010-11-29 15:58:53 UTC
Created attachment 255847 [details]
Metadata file with description
Comment 4 Gert Wollny 2013-06-10 15:45:30 UTC
Why sci-visualization? elastix doesn't provide any  kind of visualization, it is only a command line tool.
Comment 5 Gert Wollny 2013-06-11 10:19:35 UTC
Created attachment 350734 [details, diff]
Correctly disable mevisdicomtiff

Even though mevisdicomtiff was disabled, the build system tries to build and link it. This becomes an issue  because it requires itk_tiff.h which is no longer installed with ITK 4.4.

The patch corrects the issue by not building mevisdicomtiff when it is disabled.
Comment 6 Gert Wollny 2013-06-11 10:23:28 UTC
Created attachment 350738 [details]
Updated ebuild

New ebuild that applies the "disable mevisdicomdiff" patch amd enabled USE_KNN...
because the build system requires the libANN to be build.