While doing bug 343751, I noticed that sci-calculators/orpie-1.5.1 fails to build due to undefined references. Reproducible: Always Steps to Reproduce: 1. emerge sci-calculators/orpie-1.5.1 Actual Results: Build fails, see attachment Expected Results: Successful build. emerge --info Portage 2.1.8.3 (default/linux/x86/10.0, gcc-4.4.4, glibc-2.11.2-r3, 2.6.35 i686) ================================================================= System uname: Linux-2.6.35-i686-Mobile_AMD_Sempron-tm-_Processor_2800+-with-gentoo-1.12.13 Timestamp of tree: Sat, 06 Nov 2010 06:30:19 +0000 distcc 3.1 i686-pc-linux-gnu [enabled] app-shells/bash: 4.1_p7 dev-java/java-config: 2.1.11 dev-lang/python: 2.6.5-r3, 3.1.2-r4 dev-util/cmake: 2.8.1-r2 sys-apps/baselayout: 1.12.13 sys-apps/sandbox: 2.3-r1 sys-devel/autoconf: 2.13, 2.65-r1 sys-devel/automake: 1.10.3, 1.11.1 sys-devel/binutils: 2.20.1-r1 sys-devel/gcc: 4.4.4-r2 sys-devel/gcc-config: 1.4.1 sys-devel/libtool: 2.2.10 sys-devel/make: 3.81-r2 virtual/os-headers: 2.6.30-r1 ACCEPT_KEYWORDS="x86" ACCEPT_LICENSE="* -@EULA" CBUILD="i686-pc-linux-gnu" CFLAGS="-march=athlon-xp -O2 -pipe" CHOST="i686-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/X11/xkb" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/eselect/postgresql /etc/fonts/fonts.conf /etc/gconf /etc/php/apache2-php5/ext-active/ /etc/php/cgi-php5/ext-active/ /etc/php/cli-php5/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-march=athlon-xp -O2 -pipe" DISTDIR="/usr/portage/distfiles" FEATURES="assume-digests collision-protect distcc distlocks fixpackages news nostrip parallel-fetch protect-owned sandbox sfperms strict test unmerge-logs unmerge-orphans userfetch userpriv" GENTOO_MIRRORS="http://distfiles.gentoo.org" LANG="nl_NL.UTF-8" LDFLAGS="-Wl,-O1,--as-needed" LINGUAS="nl en uk" MAKEOPTS="-j3" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/usr/local/portage" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="7zip X acl acpi alsa autoipd avahi bash-completion berkdb bzip2 cairo cli cracklib crypt cxx dbus dri encode fam ffmpeg flac fortran fts3 gdbm gif gmp gnutls gpm gtk hal iconv icu imap ipv6 ithreads java5 jpeg libnotify mikmod mmx modules mp3 mudflap ncurses networking nls nptl nptlonly ogg openexr opengl openmp openssl pam pcre perl pic player png pppd python qt3support qt4 rdesktop readline sdl session smime sockets spell sqlite sqlite3 sse sse2 ssl startup-notification svg sysfs tcpd theora threads thunar timidity truetype unicode vnc vorbis x86 xcb xcomposite xft xorg zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1 emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="nl en uk" PHP_TARGETS="php5-2" RUBY_TARGETS="ree18" USERLAND="GNU" VIDEO_CARDS="radeonhd radeon" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, INSTALL_MASK, LC_ALL, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Created attachment 253421 [details] Build log
Targets: dev-ml/fort-0.4.2 dev-ml/ocamlgsl-0.6.0 sci-calculators/orpie-1.5.1-r1 Arches please do your magic. Thanks!
dev-ml/ocamlgsl-0.6.0 has QA issues: * QA Notice: Files built without respecting LDFLAGS have been detected * Please include the following list of files in your report: * /usr/lib/ocaml/site-packages/stublibs/dllmlgsl.so Can we fix this first?
And worse. orpie-1.5.1-r1 does not build either: config.status: creating install.ml >>> Source configured. >>> Compiling source in /var/tmp/portage/sci-calculators/orpie-1.5.1-r1/work/orpie-1.5.1 ... make -j3 ocamlc.opt -c -g -I ./curses -thread curses/curses.mli cd curses && ocamlc.opt -ccopt "-Wall -fPIC -DPIC " -c ml_curses.c make: *** No rule to make target `/usr/lib/ocaml/gsl/gsl.cmxa', needed by `orpie.opt'. Stop. make: *** Waiting for unfinished jobs.... In file included from ml_curses.c:177: functions.c: In function ‘mlcurses_unctrl’: functions.c:407: warning: initialization discards qualifiers from pointer target type In file included from ml_curses.c:177: functions.c: In function ‘mlcurses_keyname’: functions.c:408: warning: initialization discards qualifiers from pointer target type In file included from ml_curses.c:177: functions.c: In function ‘mlcurses_getsyx’: functions.c:295: warning: ‘x’ may be used uninitialized in this function functions.c:295: warning: ‘y’ may be used uninitialized in this function
(In reply to comment #3) > dev-ml/ocamlgsl-0.6.0 has QA issues: > > * QA Notice: Files built without respecting LDFLAGS have been detected > * Please include the following list of files in your report: > * /usr/lib/ocaml/site-packages/stublibs/dllmlgsl.so > > Can we fix this first? Funny, it should go to /usr/lib/ocaml/stublibs/dllmlgsl.so and doesn't rise that warning here... The failure with orpie is caused by files missing from ocamlgsl. Can you attach output of `equery f ocamlgsl` and emerge --info please?
(In reply to comment #5) > > Can we fix this first? > Funny, it should go to /usr/lib/ocaml/stublibs/dllmlgsl.so and doesn't rise > that warning here... The failure with orpie is caused by files missing from > ocamlgsl. Can you attach output of `equery f ocamlgsl` and emerge --info > please? > Hi, just tested it here on stable amd64 chroot and x86 mostly stable system. The problem does only exist on x86. It installs as expected under amd64 but installs into /usr/lib/ocaml/site-packages for x86 for the stublib and also the gsl subdir as well.
(In reply to comment #6) > It installs as expected under amd64 but installs into > /usr/lib/ocaml/site-packages for x86 for the stublib and also the gsl subdir as > well. That look like an issue with dev-ml/findlib. @ml could you help here, please?
Seems all fixed with the new versions of ocaml packages in bug 343751. I believe this can be closed as soon as we have new stable ocaml packages.
x86 done. Thanks everybody.
!!! All ebuilds that could satisfy "dev-ml/ocamlgsl" have been masked. !!! One of the following masked packages is required to complete your request: - dev-ml/ocamlgsl-0.6.0 (masked by: ~amd64 keyword) emerge =sci-calculators/orpie-1.5.1-r1 =dev-ml/ocamlgsl --- Invalid atom in /etc/portage/package.keywords: =dev-ml/ocamlgsl !!! '=dev-ml/ocamlgsl' is not a valid package atom. !!! Please check ebuild(5) for full details. docmain doc # emerge -s dev-ml/ocamlgsl --- Invalid atom in /etc/portage/package.keywords: =dev-ml/ocamlgsl Searching... [ Results for search key : dev-ml/ocamlgsl ] [ Applications found : 0 ] fail amd64 emerge --info --- Invalid atom in /etc/portage/package.keywords: =dev-ml/ocamlgsl Portage 2.1.8.3 (default/linux/amd64/10.0/desktop/kde, gcc-4.4.4, glibc-2.11.2-r3, 2.6.34-gentoo-r12 x86_64) ================================================================= System uname: Linux-2.6.34-gentoo-r12-x86_64-AMD_Phenom-tm-_9650_Quad-Core_Processor-with-gentoo-1.12.14 Timestamp of tree: Mon, 15 Nov 2010 13:35:01 +0000 app-shells/bash: 4.1_p7 dev-lang/python: 2.6.5-r3, 3.1.2-r4 dev-util/cmake: 2.8.1-r2 sys-apps/baselayout: 1.12.14-r1 sys-apps/sandbox: 2.3-r1 sys-devel/autoconf: 2.13, 2.65-r1 sys-devel/automake: 1.8.5-r4, 1.9.6-r3, 1.10.3, 1.11.1 sys-devel/binutils: 2.20.1-r1 sys-devel/gcc: 4.4.4-r2 sys-devel/gcc-config: 1.4.1 sys-devel/libtool: 2.2.10 sys-devel/make: 3.81-r2 virtual/os-headers: 2.6.30-r1 ACCEPT_KEYWORDS="amd64" ACCEPT_LICENSE="*" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-O2 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/X11/xkb /usr/share/config" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/php/apache2-php5/ext-active/ /etc/php/cgi-php5/ext-active/ /etc/php/cli-php5/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" CXXFLAGS="-O2 -pipe" DISTDIR="/usr/portage/distfiles" FEATURES="assume-digests collision-protect distlocks fixpackages multilib-strict news parallel-fetch protect-owned sandbox sfperms strict test unmerge-logs unmerge-orphans userfetch" GENTOO_MIRRORS="ftp://ftp.cc.uoc.gr/mirrors/linux/gentoo/ rsync://mirrors.rit.edu/gentoo/ http://mirror.datapipe.net/gentoo" LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu" MAKEOPTS="-j6" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="X a52 aac acl acpi alsa amd64 berkdb bluetooth branding bzip2 cairo cdr cli consolekit cracklib crypt cups cxx dbus device-mapper dri dts dvd dvdr emboss encode exif extras fam firefox flac fortran gd gif gnutls gpm gtk hal iconv ipv6 jpeg kde lcms ldap libnotify mad mikmod mmx mng modules mp3 mp4 mpeg mudflap multilib mysql ncurses nls nptl nptlonly ogg opengl openmp pam pango pcre pdf perl png policykit ppds pppd python qt3support qt4 readline reports sdl semantic-desktop session spell sql sqlite sse sse2 ssl startup-notification svg sysfs tcpd tiff truetype unicode usb vorbis webkit x264 xcb xml xorg xulrunner xv xvid zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="evdev keyboard mouse" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" PHP_TARGETS="php5-2" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="nvidia vesa fbdev" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, INSTALL_MASK, LANG, LC_ALL, LINGUAS, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, PORTDIR_OVERLAY
(In reply to comment #10) > !!! All ebuilds that could satisfy "dev-ml/ocamlgsl" have been masked. You need to test the whole list in comment #2 together.
(In reply to comment #11) > (In reply to comment #10) > > !!! All ebuilds that could satisfy "dev-ml/ocamlgsl" have been masked. > > You need to test the whole list in comment #2 together. > read comment 2, followed instructions this time, still a fail on amd64
(In reply to comment #12) > (In reply to comment #11) > > (In reply to comment #10) > > > !!! All ebuilds that could satisfy "dev-ml/ocamlgsl" have been masked. > > > > You need to test the whole list in comment #2 together. > > > > read comment 2, followed instructions this time, still a fail on amd64 > You probably forgot the "=" sign in the front of each list item
ok, after some work and testing amd64 stable took some work for me, not the package to figure it out and test
amd64 done. Thanks Blain
