I get the following while building molden-4.8-r1 on amd64. My work around is to remove /usr/bin/ex, ln -s /usr/bin/vim /usr/bin/ex, emerge molden, then restore the symlink for ex to point towards busybox. gfortran -o ambmd md.o verlet.o allocmd.o angle.o bond.o charge.o conn.o enegrd.o getinp.o param.o tors.o vdwlj.o math.o optimise.o switch.o wrtout.o pbc.o -lm make[1]: Leaving directory `/var/tmp/portage/sci-chemistry/molden-4.8-r1/work/molden4.8/ambfor' make -C surf depend make[1]: Entering directory `/var/tmp/portage/sci-chemistry/molden-4.8-r1/work/molden4.8/surf' making dependencies... ex: applet not found make[1]: *** [depend] Error 1 make[1]: Leaving directory `/var/tmp/portage/sci-chemistry/molden-4.8-r1/work/molden4.8/surf' make: *** [surf/surf] Error 2
Please attach the entire build log, and post your `emerge --info' in a comment.
Created attachment 242821 [details] emerge log
localhost matlab-2010a # emerge --info Portage 2.2_rc67-r2 (default/linux/amd64/2008.0/desktop, gcc-4.4.3, glibc-2.10.1-r1, 2.6.35.1 x86_64) ================================================================= System uname: Linux-2.6.35.1-x86_64-Dual_Core_AMD_Opteron-tm-_Processor_170-with-gentoo-2.1.6 Timestamp of tree: Fri, 13 Aug 2010 05:35:01 +0000 app-shells/bash: 4.1_p7 dev-java/java-config: 2.1.11 dev-lang/python: 2.6.5-r3 dev-util/cmake: 2.8.1-r2 sys-apps/baselayout: 2.1.6 sys-apps/openrc: 0.6.0 sys-apps/sandbox: 2.2 sys-devel/autoconf: 2.65-r1 sys-devel/automake: 1.9.6-r3, 1.10.3, 1.11.1 sys-devel/binutils: 2.20.1 sys-devel/gcc: 4.4.3 sys-devel/gcc-config: 1.4.1 sys-devel/libtool: 2.2.10 virtual/os-headers: 2.6.32 ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="* -@EULA" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=opteron -O2 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/X11/xkb /usr/share/config" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c /etc/udev/rules.d" CXXFLAGS="-march=opteron -O2 -pipe" DISTDIR="/usr/portage/distfiles" FEATURES="assume-digests confcache distlocks fixpackages mini-manifest news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unmerge-logs unmerge-orphans userfetch" GENTOO_MIRRORS="http://gentoo.mirrors.pair.com/ http://mirror.mcs.anl.gov/pub/gentoo/ " LDFLAGS="-Wl,-O1 -Wl,--sort-common -Wl,--as-needed" MAKEOPTS="-j2" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="X a52 aac acl acpi alac alsa amd64 ao apm arts avahi berkdb branding bzip2 cairo cdr cli consolekit cracklib crypt cups cxx dbus dri dts dvd dvdr dvdread emboss encode esd exif fam fftw firefox flac fortran gdbm gif gpm hal history iconv int64 ipv6 java javascript jpeg jpeg2 kde kerberos lame lapack lcms ldap libnotify mad mdnsresponder-compat mikmod mmx mng modules motif mp3 mp4 mpeg mudflap multilib ncurses nls nptl nptlonly ogg openal opengl openmp pam pango pcre pdf perl png ppds pppd python qt3support qt4 readline reflection sdl session spell spl sse sse2 ssl startup-notification subversion svg sysfs tcpd tiff truetype unicode usb vorbis wavpack webkit x264 xcb xml xorg xulrunner xv xvid zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" ELIBC="glibc" INPUT_DEVICES="evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="nvidia" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, INSTALL_MASK, LANG, LC_ALL, LINGUAS, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, PORTDIR_OVERLAY
Thank you. Assigning to maintainers.
Could you please retest with 4.8-r2 or/and 5.0?
I have tried emerging 5.0 on two different boxes (one intel and one amd) and I still run into the same error if /usr/bin/ex is a softlink to /usr/bin/busybox instead of /usr/bin/vim.
I think this problem is funtoo related. Emerging molden on a pure gentoo install did not run into this problem.
