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Bug 323129 - sci-libs/blas-atlas-3.9.23-r2(r4) fails to compile: ERROR 818 DURING CACHE EDGE DETECTION
Summary: sci-libs/blas-atlas-3.9.23-r2(r4) fails to compile: ERROR 818 DURING CACHE ED...
Status: RESOLVED OBSOLETE
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: x86 Linux
: High normal (vote)
Assignee: Gentoo Science Related Packages
URL:
Whiteboard:
Keywords:
Depends on:
Blocks: 372323
  Show dependency tree
 
Reported: 2010-06-08 01:22 UTC by Alex Filov
Modified: 2013-01-31 11:08 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
build.log (build.log,1.94 MB, text/plain)
2011-02-10 11:02 UTC, Max Khardin
Details

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Description Alex Filov 2010-06-08 01:22:18 UTC
emerge blas-atlas-3.9.23-r2(r4) fails with:

Initial CE=256KB, mflop=1187.68

 T   N      80    2000   13107    1.00    1.00        192      3.528   1188.69
make[4]: *** [dRunFindCE] Error 255
make[4]: Leaving directory `/var/tmp/portage/sci-libs/blas-atlas-3.9.23-r2/work/ATLAS/gentoo-build/tune/blas/gemm'
make[3]: *** [res/atlas_cacheedge.h] Error 2
make[3]: Leaving directory `/var/tmp/portage/sci-libs/blas-atlas-3.9.23-r2/work/ATLAS/gentoo-build/tune/blas/gemm'
make[2]: *** [/var/tmp/portage/sci-libs/blas-atlas-3.9.23-r2/work/ATLAS/gentoo-build/tune/blas/gemm/res/atlas_cachedge.h] Error 2
make[2]: Leaving directory `/var/tmp/portage/sci-libs/blas-atlas-3.9.23-r2/work/ATLAS/gentoo-build/bin'
ERROR 818 DURING CACHE EDGE DETECTION!!.
make[2]: Entering directory `/var/tmp/portage/sci-libs/blas-atlas-3.9.23-r2/work/ATLAS/gentoo-build/bin'
cd /var/tmp/portage/sci-libs/blas-atlas-3.9.23-r2/work/ATLAS/gentoo-build ; make error_report
make[3]: Entering directory `/var/tmp/portage/sci-libs/blas-atlas-3.9.23-r2/work/ATLAS/gentoo-build'
make -f Make.top error_report
make[4]: Entering directory `/var/tmp/portage/sci-libs/blas-atlas-3.9.23-r2/work/ATLAS/gentoo-build'
uname -a 2>&1 >> bin/INSTALL_LOG/ERROR.LOG
gcc -v 2>&1  >> bin/INSTALL_LOG/ERROR.LOG
Using built-in specs.
Target: i686-pc-linux-gnu
Configured with: /var/tmp/portage/sys-devel/gcc-4.3.4/work/gcc-4.3.4/configure --prefix=/usr --bindir=/usr/i686-pc-linux-gnu/gcc-bin/4.3.4 --includedir=/usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include --datadir=/usr/share/gcc-data/i686-pc-linux-gnu/4.3.4 --mandir=/usr/share/gcc-data/i686-pc-linux-gnu/4.3.4/man --infodir=/usr/share/gcc-data/i686-pc-linux-gnu/4.3.4/info --with-gxx-include-dir=/usr/lib/gcc/i686-pc-linux-gnu/4.3.4/include/g++-v4 --host=i686-pc-linux-gnu --build=i686-pc-linux-gnu --disable-altivec --disable-fixed-point --enable-nls --without-included-gettext --with-system-zlib --disable-checking --disable-werror --enable-secureplt --disable-multilib --enable-libmudflap --disable-libssp --enable-libgomp --disable-libgcj --with-arch=i686 --enable-languages=c,c++,treelang,fortran --enable-shared --enable-threads=posix --enable-__cxa_atexit --enable-clocale=gnu --with-bugurl=http://bugs.gentoo.org/ --with-pkgversion='Gentoo 4.3.4 p1.0, pie-10.1.5'
Thread model: posix
gcc version 4.3.4 (Gentoo 4.3.4 p1.0, pie-10.1.5) 
gcc -V 2>&1  >> bin/INSTALL_LOG/ERROR.LOG
gcc: '-V' option must have argument
make[4]: [error_report] Error 1 (ignored)
gcc --version 2>&1  >> bin/INSTALL_LOG/ERROR.LOG
tar cf error_PM32SSE2.tar Make.inc bin/INSTALL_LOG/*
gzip --best error_PM32SSE2.tar
mv error_PM32SSE2.tar.gz error_PM32SSE2.tgz
make[4]: Leaving directory `/var/tmp/portage/sci-libs/blas-atlas-3.9.23-r2/work/ATLAS/gentoo-build'
make[3]: Leaving directory `/var/tmp/portage/sci-libs/blas-atlas-3.9.23-r2/work/ATLAS/gentoo-build'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/blas-atlas-3.9.23-r2/work/ATLAS/gentoo-build/bin'
Error report error_<ARCH>.tgz has been created in your top-level ATLAS
directory.  Be sure to include this file in any help request.
cat: ../../CONFIG/error.txt: No such file or directory
cat: ../../CONFIG/error.txt: No such file or directory
make[1]: *** [build] Error 255
make[1]: Leaving directory `/var/tmp/portage/sci-libs/blas-atlas-3.9.23-r2/work/ATLAS/gentoo-build'
make: *** [build] Error 2


Reproducible: Always

Steps to Reproduce:
1.emerge -av =sci-libs/blas-atlas-3.9.23-r2 or -r4
2.
3.
Comment 1 Alex Filov 2010-06-08 01:23:47 UTC
emerge --info
Portage 2.1.8.3 (default/linux/x86/10.0, gcc-4.3.4, glibc-2.10.1-r1, 2.6.33-rt7 i686)
=================================================================
System uname: Linux-2.6.33-rt7-i686-Intel-R-_Pentium-R-_M_processor_1.40GHz-with-debian-squeeze-sid
Timestamp of tree: Sat, 05 Jun 2010 12:30:01 +0000
app-shells/bash:     4.0_p35
dev-java/java-config: 2.1.10
dev-lang/python:     2.6.4-r1
dev-python/pycrypto: 2.1.0
dev-util/cmake:      2.6.4-r3
sys-apps/baselayout: 1.12.13
sys-apps/sandbox:    1.6-r2
sys-devel/autoconf:  2.13, 2.63-r1
sys-devel/automake:  1.9.6-r2, 1.10.2
sys-devel/binutils:  2.18-r3
sys-devel/gcc:       4.3.4
sys-devel/gcc-config: 1.4.1
sys-devel/libtool:   2.2.6b
virtual/os-headers:  2.6.32
ACCEPT_KEYWORDS="x86"
ACCEPT_LICENSE="* -@EULA dlj-1.1"
CBUILD="i686-pc-linux-gnu"
CFLAGS="-O2 -march=pentium-m -pipe -fomit-frame-pointer"
CHOST="i686-pc-linux-gnu"
CONFIG_PROTECT="/etc /opt/openfire/resources/security/ /usr/share/X11/xkb /usr/share/config"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/eselect/postgresql /etc/fonts/fonts.conf /etc/gconf /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c /etc/udev/rules.d"
CXXFLAGS="-O2 -march=pentium-m -pipe -fomit-frame-pointer"
DISTDIR="/usr/portage/distfiles"
FEATURES="assume-digests distlocks fixpackages metadata-transfer news parallel-fetch protect-owned sandbox sfperms strict unmerge-logs unmerge-orphans userfetch"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="en_US.UTF-8"
LDFLAGS="-Wl,-O1"
LINGUAS="en ru"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/usr/local/portage/layman/sage-on-gentoo /usr/local/portage"
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="X a52 aac acl alsa berkdb bzip2 cairo cli cracklib crypt cue cups cxx dri emacs ffmpeg flac fortran gdbm gnuplot gpm graphviz iconv imagemagick ipython java jpeg jpeg2k lame matroska mmx modules mp3 mpeg mudflap ncurses nls nptl nptlonly nsplugin opengl openmp pam pcre perl pppd python pyx readline reflection run-as-root session spl sqlite sse sse2 ssl sysfs tcpd tcpreplay theora tiff unicode visual vorbis wavpack win32codecs x264 x86 xorg xv xvid zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1 emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" ELIBC="glibc" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="en ru" QEMU_SOFTMMU_TARGETS="arm i386 mips mipsel" QEMU_USER_TARGETS="arm armeb mips mipsel" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="intel vesa" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" 
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, INSTALL_MASK, LC_ALL, MAKEOPTS, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS

Comment 2 Michael Weber (RETIRED) gentoo-dev 2010-06-08 14:53:16 UTC
Hi Alex, 

can we please get the complete build.log and environment file?

Thanks, Michael
Comment 3 Max Khardin 2011-02-10 11:02:55 UTC
Created attachment 262029 [details]
build.log
Comment 4 Max Khardin 2011-02-10 11:04:42 UTC
having the same bug, build.log attached, here is the emerge --info
=====================================
Portage 2.2.0_alpha23 (default/linux/x86/10.0/desktop, gcc-4.5.2, glibc-2.13-r0, 2.6.34-zen1 i686)
=================================================================
System uname: Linux-2.6.34-zen1-i686-Intel-R-_Atom-TM-_CPU_N270_@_1.60GHz-with-gentoo-2.0.1
Timestamp of tree: Thu, 10 Feb 2011 01:45:01 +0000
ccache version 2.4 [enabled]
app-shells/bash:     4.1_p9
dev-java/java-config: 2.1.11-r3
dev-lang/python:     2.6.6-r1, 2.7.1, 3.1.3
dev-util/ccache:     2.4-r9
dev-util/cmake:      2.8.3-r1
sys-apps/baselayout: 2.0.1-r1
sys-apps/openrc:     0.7.0
sys-apps/sandbox:    2.4
sys-devel/autoconf:  2.13, 2.65-r1
sys-devel/automake:  1.9.6-r3, 1.10.3, 1.11.1
sys-devel/binutils:  2.21
sys-devel/gcc:       4.5.2
sys-devel/gcc-config: 1.4.1
sys-devel/libtool:   2.2.10
sys-devel/make:      3.81-r2
virtual/os-headers:  2.6.36.1 (sys-kernel/linux-headers)
Repositories: gentoo sunrise mozilla myhaskell
Installed sets: 
ACCEPT_KEYWORDS="x86"
ACCEPT_LICENSE="*"
CBUILD="i686-pc-linux-gnu"
CFLAGS="-O2 -march=atom -mtune=native -fomit-frame-pointer -pipe -msse -msse2 -mssse3 -mmmx -msse3 -ftree-vectorize -mmovbe -mfpmath=sse+387"
CHOST="i686-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt /usr/share/themes/oxygen-gtk/gtk-2.0"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/eselect/postgresql /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-O2 -march=atom -mtune=native -fomit-frame-pointer -pipe -msse -msse2 -mssse3 -mmmx -msse3 -ftree-vectorize -mmovbe -mfpmath=sse+387"
DISTDIR="/usr/portage/distfiles"
FEATURES="assume-digests binpkg-logs candy ccache distlocks fixlafiles fixpackages metadata-transfer news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch"
FFLAGS=""
GENTOO_MIRRORS="http://mirror.yandex.ru/gentoo-distfiles/"
LANG="ru_RU.utf8"
LC_ALL=""
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
LINGUAS="ru en"
MAKEOPTS="-j2"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/var/lib/layman/sunrise /var/lib/layman/mozilla /var/lib/layman/mylay"
SYNC="rsync://mirror.yandex.ru/gentoo-portage"
USE="X a52 aac acl acpi alsa berkdb bonobo branding bzip2 cairo cli consolekit cracklib crypt cxx daap dbus djvu dri dts dvd dvdr eds emboss encode exif fam fftw firefox flac fortran fuse gdbm gdu gif gmp gnome gnome-keyring gpm gtk iconv icu idn intel jpeg lcms libnotify lzma mad mikmod mmx mmxext mng modules mp3 mp4 mpeg mudflap nautilus ncurses nls nptl nptlonly ogg opencl opengl pam pango pch pcre pdf perl png policykit ppds pppd python qt qt3support qt4 readline samba sdl session smp spell sse sse2 sse3 ssl ssse3 startup-notification svg sysfs tcpd thumbnail tiff truetype udev unicode urandom usb v4l v4l2 vorbis x264 x86 xcb xcomposite xft xml xmp xorg xulrunner xv xvid zlib" ALSA_CARDS="hda-intel loopback virmidi" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CAMERAS="canon" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="keyboard mouse evdev synaptics" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="ru en" PHP_TARGETS="php5-3" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="fbdev vesa nvidia nv" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" 
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Comment 5 Justin Lecher (RETIRED) gentoo-dev 2013-01-31 11:08:16 UTC
Dropped all atlas packages from tree.
Please use sci-libs/atlas from sci overlay.
If problem still exist with that package, please reopen the bug or file a new one.