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Bug 321109 - dev-lang/spim - Stochastic Pi Machine: a programming language for designing and simulating computer models of biological processes
Summary: dev-lang/spim - Stochastic Pi Machine: a programming language for designing a...
Status: CONFIRMED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: New packages (show other bugs)
Hardware: All Linux
: High enhancement (vote)
Assignee: Default Assignee for New Packages
URL: http://research.microsoft.com/en-us/p...
Whiteboard: sunrise-suggested
Keywords:
Depends on:
Blocks:
 
Reported: 2010-05-22 21:16 UTC by Danilo Pianini
Modified: 2013-09-14 16:05 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


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Description Danilo Pianini 2010-05-22 21:16:04 UTC
The Stochastic Pi Machine (SPiM) is a programming language for designing and simulating computer models of biological processes. The language is based on a mathematical formalism known as the pi-calculus, and the simulation algorithm is based on standard kinetic theory of physical chemistry. The language features a simple graphical notation for modelling a range of biological systems, and can be used to model large systems incrementally, by directly composing simpler models of subsystems.
SPiM is exploited in advanced courses and in research at Università di Bologna.



Reproducible: Always

Steps to Reproduce:
Comment 1 Markos Chandras (RETIRED) gentoo-dev 2010-05-25 08:45:50 UTC
Hello, The Gentoo Team would like to firstly thank you for your ebuild 
submission. We also apologize for not being able to accommodate you in a timely
manner. There are simply too many new packages.

Allow me to use this opportunity to introduce you to Gentoo Sunrise. The 
sunrise overlay[1] is a overlay for Gentoo which we allow trusted users to 
commit to and all users can have ebuilds reviewed by Gentoo devs for entry 
into the overlay. So, the sunrise team is suggesting that you look into this 
and submit your ebuild to the overlay where even *you* can commit to. =)

Thanks,
On behalf of the Gentoo Sunrise Team,
Markos.

[1]: http://www.gentoo.org/proj/en/sunrise/
[2]: http://overlays.gentoo.org/proj/sunrise/wiki/SunriseFaq