Gentoo Websites Logo
Go to: Gentoo Home Documentation Forums Lists Bugs Planet Store Wiki Get Gentoo!
Bug 321039 - sys-cluster/mpi-dotnet-1.0.0 install failed
Summary: sys-cluster/mpi-dotnet-1.0.0 install failed
Status: RESOLVED TEST-REQUEST
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: High normal (vote)
Assignee: Matti Bickel (RETIRED)
URL:
Whiteboard:
Keywords:
Depends on:
Blocks: 281207
  Show dependency tree
 
Reported: 2010-05-22 13:33 UTC by Pacho Ramos
Modified: 2012-08-13 14:59 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
build.log (mpi-dotnet-1.0.0:20100522-132800.log,17.98 KB, text/plain)
2010-05-22 13:34 UTC, Pacho Ramos
Details

Note You need to log in before you can comment on or make changes to this bug.
Description Pacho Ramos gentoo-dev 2010-05-22 13:33:55 UTC
Due:

make[1]: Entering directory `/var/tmp/portage/sys-cluster/mpi-dotnet-1.0.0/work/mpi.net-1.0.0/MPI'
/usr/bin/gmcs -out:MPI.dll -unsafe -target:library -lib:../MPIUtils -reference:MPIUtils -optimize+  -define:BROKEN_IL_EMIT -define:BROKEN_NULL_DELEGATE -define:MPI_HANDLES_ARE_POINTERS -keyfile:./MPI.snk ./Attribute.cs ./CartesianCommunicator.cs ./Communicator.cs ./Comparison.cs ./DatatypeCache.cs ./Environment.cs ./Exceptions.cs ./GraphCommunicator.cs ./Group.cs ./Intercommunicator.cs ./Intracommunicator.cs ./Operation.cs ./Request.cs ./RequestList.cs ./Status.cs ./TagAllocator.cs ./TopologicalCommunicator.cs ./UnmanagedMemoryStream.cs CustomUnsafe.cs 
Internal compiler error at ./Communicator.cs(1618,23):: exception caught while emitting MethodBuilder [Communicator::GatherFlattened_impl]

Unhandled Exception: Mono.CSharp.InternalErrorException: VerifyArgumentsCompat didn't find any problem with rejected candidate Void Gather_impl[T[]](Boolean, Int32, T[], Int32, T[][] ByRef)
  at Mono.CSharp.MethodGroupExpr.OverloadResolve (Mono.CSharp.ResolveContext ec, Mono.CSharp.Arguments& Arguments, Boolean may_fail, Location loc) [0x00000] in <filename unknown>:0 
  at Mono.CSharp.Invocation.DoResolveOverload (Mono.CSharp.ResolveContext ec) [0x00000] in <filename unknown>:0 
  at Mono.CSharp.Invocation.DoResolve (Mono.CSharp.ResolveContext ec) [0x00000] in <filename unknown>:0 
  at Mono.CSharp.Expression.Resolve (Mono.CSharp.ResolveContext ec, ResolveFlags flags) [0x00000] in <filename unknown>:0 
  at Mono.CSharp.Expression.Resolve (Mono.CSharp.ResolveContext ec) [0x00000] in <filename unknown>:0 
  at Mono.CSharp.ExpressionStatement.ResolveStatement (Mono.CSharp.BlockContext ec) [0x00000] in <filename unknown>:0 
  at Mono.CSharp.StatementExpression.Resolve (Mono.CSharp.BlockContext ec) [0x00000] in <filename unknown>:0 
  at Mono.CSharp.Block.Resolve (Mono.CSharp.BlockContext ec) [0x00000] in <filename unknown>:0 
  at Mono.CSharp.If.Resolve (Mono.CSharp.BlockContext ec) [0x00000] in <filename unknown>:0 
  at Mono.CSharp.Block.Resolve (Mono.CSharp.BlockContext ec) [0x00000] in <filename unknown>:0 
  at Mono.CSharp.If.Resolve (Mono.CSharp.BlockContext ec) [0x00000] in <filename unknown>:0 
  at Mono.CSharp.Block.Resolve (Mono.CSharp.BlockContext ec) [0x00000] in <filename unknown>:0 
  at Mono.CSharp.Block.Resolve (Mono.CSharp.BlockContext ec) [0x00000] in <filename unknown>:0 
  at Mono.CSharp.ToplevelBlock.Resolve (Mono.CSharp.FlowBranching parent, Mono.CSharp.BlockContext rc, Mono.CSharp.ParametersCompiled ip, IMethodData md) [0x00000] in <filename unknown>:0 
make[1]: *** [MPI.dll] Error 1
make[1]: Leaving directory `/var/tmp/portage/sys-cluster/mpi-dotnet-1.0.0/work/mpi.net-1.0.0/MPI'
make: *** [install-recursive] Error 1


My emerge --info:

Portage 2.1.8.3 (default/linux/amd64/10.0/desktop/gnome, gcc-4.3.4, glibc-2.10.1-r1, 2.6.32-gentoo-r7 x86_64)
=================================================================
System uname: Linux-2.6.32-gentoo-r7-x86_64-AMD_Athlon-tm-_64_Processor_3200+-with-gentoo-1.12.13
Timestamp of tree: Sat, 22 May 2010 09:00:21 +0000
ccache version 2.4 [enabled]
app-shells/bash:     4.0_p37
dev-java/java-config: 2.1.10
dev-lang/python:     2.6.4-r1
dev-util/ccache:     2.4-r7
dev-util/cmake:      2.6.4-r3
sys-apps/baselayout: 1.12.13
sys-apps/sandbox:    1.6-r2
sys-devel/autoconf:  2.13, 2.63-r1
sys-devel/automake:  1.9.6-r3, 1.10.3, 1.11.1
sys-devel/binutils:  2.18-r3
sys-devel/gcc:       4.3.4
sys-devel/gcc-config: 1.4.1
sys-devel/libtool:   2.2.6b
virtual/os-headers:  2.6.30-r1
ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/X11/xkb /usr/share/config /var/lib/hsqldb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=native -O2 -pipe"
DISTDIR="/usr/distfiles"
FEATURES="assume-digests autoaddcvs ccache cvs distlocks fixpackages multilib-strict news parallel-fetch protect-owned sandbox sfperms sign split-log strict test unmerge-logs unmerge-orphans userfetch"
GENTOO_MIRRORS="ftp://ftp.free.fr/mirrors/ftp.gentoo.org"
LANG="es_ES.UTF-8"
LDFLAGS="-Wl,-O1"
LINGUAS="es es_ES en_US"
MAKEOPTS="-j2"
PKGDIR="/usr/local/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/usr/portage/local/layman/sunrise /usr/portage/local/layman/suka /usr/local/portage"
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="3dnow 3dnowext X a52 aac acl acpi alsa amd64 applet avahi bash-completion berkdb branding bzip2 cairo cddb cdinstall cdr cleartype cli consolekit cracklib crypt css cups cxx daap dbus djvu dri dts dvd dvdr dvi eds emboss encode evo exif fam fat ffmpeg firefox flac fortran fuse gdbm gdu gif glitz gnome gnome-keyring gpm gstreamer gtk hal iconv imagemagick java jpeg kdehiddenvisibility kpathsea latex lcms libnotify lyx lzma mad mikmod mmx mmxext mng modules mono mp3 mp4 mpeg mudflap multilib musicbrainz nautilus ncurses network network-cron nls nptl nptlonly ntfs nvidia ogg opengl openmp pam pango pch pcre pdf perl png policykit ppds pppd python qt3support qt4 readline reflection reiserfs scanner sdl session spell spl sse sse2 ssl ssse3 startup-notification svg sysfs t1lib tcpd threads tiff truetype unicode usb v4l2 vcd vorbis webkit x264 xattr xcb xinetd xml xmp xorg xpm xulrunner xv xvid zeroconf zlib" ALSA_CARDS="via82xx" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" ELIBC="glibc" INPUT_DEVICES="evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="es es_ES en_US" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="nvidia nv vesa" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" 
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, INSTALL_MASK, LC_ALL, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS


Reproducible: Always
Comment 1 Pacho Ramos gentoo-dev 2010-05-22 13:34:10 UTC
Created attachment 232461 [details]
build.log
Comment 2 Matti Bickel (RETIRED) gentoo-dev 2010-06-18 20:21:13 UTC
What version of mpi have you installed? OpenMPI?
I've just uploaded a revised patch for Unsafe.pl which should fix building with recent OpenMPI, but that didn't look like your error at all.

Since it's mono which outputs the error: which mono version do you run? (emerge --info mono)
Comment 3 Pacho Ramos gentoo-dev 2010-06-19 11:04:19 UTC
I have 2.6 one :-/


$ emerge --info mono
Portage 2.1.8.3 (default/linux/amd64/10.0/desktop/gnome, gcc-4.4.3, glibc-2.10.1-r1, 2.6.34-ck x86_64)
=================================================================
                        System Settings
=================================================================
System uname: Linux-2.6.34-ck-x86_64-AMD_Athlon-tm-_64_Processor_3200+-with-gentoo-1.12.13
Timestamp of tree: Fri, 18 Jun 2010 12:00:01 +0000
ccache version 2.4 [enabled]
app-shells/bash:     4.0_p37
dev-java/java-config: 2.1.10
dev-lang/python:     2.6.5-r2
dev-util/ccache:     2.4-r7
dev-util/cmake:      2.6.4-r3
sys-apps/baselayout: 1.12.13
sys-apps/sandbox:    1.6-r2
sys-devel/autoconf:  2.13, 2.65
sys-devel/automake:  1.9.6-r3, 1.10.3, 1.11.1
sys-devel/binutils:  2.20.1-r1
sys-devel/gcc:       4.3.4, 4.4.3-r2
sys-devel/gcc-config: 1.4.1
sys-devel/libtool:   2.2.6b
virtual/os-headers:  2.6.30-r1
ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/X11/xkb /usr/share/config /var/lib/hsqldb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=native -O2 -pipe"
DISTDIR="/usr/distfiles"
FEATURES="assume-digests autoaddcvs ccache cvs distlocks fixpackages multilib-strict news parallel-fetch protect-owned sandbox sfperms sign split-log strict test test-fail-continue unmerge-logs unmerge-orphans userfetch"
GENTOO_MIRRORS="ftp://ftp.free.fr/mirrors/ftp.gentoo.org"
LANG="es_ES.UTF-8"
LDFLAGS="-Wl,-O1"
LINGUAS="es es_ES en_US"
MAKEOPTS="-j2"
PKGDIR="/usr/local/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/usr/portage/local/layman/sunrise /usr/local/portage"
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="3dnow 3dnowext X a52 aac acl acpi alsa amd64 applet avahi bash-completion berkdb branding bzip2 cairo cddb cdinstall cdr cleartype cli consolekit cracklib crypt css cups cxx daap dbus djvu dri dts dvd dvdr dvi eds emboss encode evo exif fam fat ffmpeg firefox flac fortran fuse gdbm gdu gif glitz gnome gnome-keyring gpm gstreamer gtk hal iconv imagemagick java jpeg kdehiddenvisibility kpathsea latex lcms libnotify lyx lzma mad mikmod mmx mmxext mng modules mono mp3 mp4 mpeg mudflap multilib musicbrainz nautilus ncurses network network-cron nls nptl nptlonly ntfs nvidia ogg opengl openmp pam pango pch pcre pdf perl png policykit ppds pppd python qt3support qt4 readline reflection reiserfs scanner sdl session spell spl sse sse2 ssl ssse3 startup-notification svg sysfs t1lib tcpd threads tiff truetype unicode usb v4l2 vcd vorbis webkit x264 xattr xcb xinetd xml xmp xorg xpm xulrunner xv xvid zeroconf zlib" ALSA_CARDS="via82xx" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" ELIBC="glibc" INPUT_DEVICES="evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="es es_ES en_US" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="nvidia nv vesa" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" 
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, INSTALL_MASK, LC_ALL, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS

=================================================================
                        Package Settings
=================================================================

dev-lang/mono-2.6.4 was built with the following:
USE="(multilib) test -minimal -moonlight -xen" 
CFLAGS="-march=native -O2 -pipe -fno-strict-aliasing"
CXXFLAGS="-march=native -O2 -pipe -fno-strict-aliasing"
Comment 4 Matti Bickel (RETIRED) gentoo-dev 2012-08-13 14:59:21 UTC
Gosh, this bug is old. Really sorry for this to sit around that long.

That said, I'm unable to reproduce this with mono-2.10 and openmpi-1.4? Please reopen with info about your mono and mpi implementation versions if you still have problems.