Bug 306239 – pymol-plugins-cealign-0.9 does not accept pymol-1.2.3

• Status: RESOLVED FIXED
• Product: Gentoo Linux

[Description urcindalo 2010-02-21 19:50:01 UTC]

pymol-plugins-cealign-0.9 wants to downgrade pymol to 1.2.2.

Is this intended? Because if it is I'll downgrade pymol happily. 

Reproducible: Always

[Comment 1 Justin Lecher (RETIRED) 2010-02-21 22:28:14 UTC]

This is intended as upstream stated that cealign will be included now in pymol directly. I am currently not really sure whether it is or not, so please downgrade to 1.2.2. The new version doesn't implement any big changes so you will not loose any functionality.
I will try to make that clear ASAP.

[Comment 2 Justin Lecher (RETIRED) 2010-02-22 07:42:58 UTC]

Reopen to mark fixed.

[Comment 3 Justin Lecher (RETIRED) 2010-02-22 07:43:51 UTC]

I reviewed the upstream svn repo and it isn'Ät included yet, so happy testing of pymol-1.2.3.

[Comment 4 urcindalo 2010-02-22 08:58:58 UTC]

Starting from a pymol-1.2.2-r4 and cealign-0.9 working combo, I upgraded pymol to the latest 1.2.3 in the tree.

After that I tested cealign with the examples in
http://www.pymolwiki.org/index.php/Cealign
and the plugin works as expected. So I think it is not a bad idea to removed the 1.2.3 restriction for pymol as of now.

[Comment 5 Justin Lecher (RETIRED) 2010-02-22 09:39:04 UTC]

It is already removed.

[Comment 6 urcindalo 2010-02-22 11:20:34 UTC]

(In reply to comment #5)
> It is already removed.
> 

Unfortunately the removal of pymol-1.2.3 from the tree and its substitution by 1.2.3-r1 breaks cealign DEPEND. It still wants to downgrade to a version lower than 1.2.3-r1.

I can confirm cealign-0.9 works with pymol-1.2.3-r1 when you first install cealign and then update pymol.

[Comment 7 Justin Lecher (RETIRED) 2010-02-22 11:45:53 UTC]

Right should work now.