I'm trying to install sci-libs/cctbx-2009.11.01.0123 on my amd64 box, but I see this error after a successful compilation: === * <<< /usr/lib64/cctbx/cctbx_sources/boost/boost/interprocess/containers/detail >>> Regenerating /etc/ld.so.cache... >>> Original instance of package unmerged safely. * Compilation and optimization of Python modules placed outside of site-packages directories for Python 2.6 ... Compiling //usr/lib64/cctbx/cctbx_sources/mmtbx/monomer_library/tst_server.py ... SyntaxError: ('invalid syntax', ('//usr/lib64/cctbx/cctbx_sources/mmtbx/monomer_library/tst_server.py', 89, 12, ' for as,bs,c in [(rna_atoms,dna_atoms,"d"), (dna_atoms,rna_atoms,"r")]:\n')) * ERROR: sci-libs/cctbx-2009.11.01.0123 failed: * _python_get_implementation(): Unrecognized Python ABI '' * * Call stack: * ebuild.sh, line 54: Called pkg_postinst * environment, line 2553: Called python_mod_optimize '/usr/lib64/cctbx/cctbx_sources' * environment, line 3758: Called _python_get_implementation '' * environment, line 553: Called die * The specific snippet of code: * die "${FUNCNAME}(): Unrecognized Python ABI '$1'"; * * If you need support, post the output of 'emerge --info =sci-libs/cctbx-2009.11.01.0123', * the complete build log and the output of 'emerge -pqv =sci-libs/cctbx-2009.11.01.0123'. * The complete build log is located at '/var/tmp/portage/sci-libs/cctbx-2009.11.01.0123/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/sci-libs/cctbx-2009.11.01.0123/temp/environment'. * S: '/var/tmp/portage/sci-libs/cctbx-2009.11.01.0123/work' [ !! ] !!! FAILED postinst: 1 >>> Regenerating /etc/ld.so.cache... === Why is it? I have the stable python-2.6.4 installed. Reproducible: Always
Please attach the build.log and the output of emerge --info =sci-libs/cctbx-2009.11.01.0123 Thanks
Same here on the tinderbox. Portage 2.1.7.17 (default/linux/x86/10.0, gcc-4.4.3-asneeded, glibc-2.11-r1, 2.6.33-rc8 i686) ================================================================= System uname: Linux-2.6.33-rc8-i686-Quad-Core_AMD_Opteron-tm-_Processor_2350-with-gentoo-2.0.1 Timestamp of tree: Sat, 13 Feb 2010 21:00:01 +0000 ccache version 2.4 [disabled] app-shells/bash: 4.0_p37 dev-java/java-config: 1.3.7-r1, 2.1.10 dev-lang/python: 2.6.4-r1, 3.1.1-r1 dev-python/pycrypto: 2.1.0 dev-util/ccache: 2.4-r8 dev-util/cmake: 2.8.0-r2 sys-apps/baselayout: 2.0.1 sys-apps/openrc: 0.6.0-r1 sys-apps/sandbox: 2.2 sys-devel/autoconf: 2.13, 2.65 sys-devel/automake: 1.4_p6-r1, 1.5-r1, 1.6.3-r1, 1.7.9-r2, 1.8.5-r4, 1.9.6-r3, 1.10.3, 1.11.1 sys-devel/binutils: 2.20 sys-devel/gcc: 4.4.3 sys-devel/gcc-config: 1.4.1 sys-devel/libtool: 2.2.6b virtual/os-headers: 2.6.32 ACCEPT_KEYWORDS="x86 ~x86" ACCEPT_LICENSE="*" CBUILD="i686-pc-linux-gnu" CFLAGS="-O2 -pipe" CHOST="i686-pc-linux-gnu" CONFIG_PROTECT="/etc /opt/openfire/resources/security/ /opt/openjms/config /usr/lib/fax /usr/lib/tomoyo/conf /usr/share/X11/xkb /usr/share/bufrtables /usr/share/config /usr/share/qpsmtpd/plugins /var/bind /var/lib/hsqldb /var/phxd /var/spool/fax/etc /var/vpopmail/etc" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/eselect/postgresql /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-O2 -pipe" DISTDIR="/var/cache/distfiles" FEATURES="assume-digests distlocks fixpackages news parallel-fetch protect-owned sandbox sfperms split-log strict test test-fail-continue unmerge-orphans userfetch userpriv usersandbox" GENTOO_MIRRORS="http://ftp.uni-erlangen.de/pub/mirrors/gentoo" INSTALL_MASK=" /usr/share/doc /usr/share/info" LANG="en_US.utf8" LDFLAGS="-Wl,-O1" MAKEOPTS="-j14" PKGDIR="/var/spool/portage/packages" PORTAGE_COMPRESS="" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/var/cache/portage/tree-tinderbox" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="acl berkdb bzip2 cli cracklib crypt cups cxx dri fortran gdbm gpm iconv ipv6 java5 java6 modules mudflap ncurses nls nostatic nptl nptlonly openmp pam pcre perl pppd python qt3support readline reflection ruby session spl ssl sysfs tcpd unicode x86 xorg zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1 emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias auth_digest" ELIBC="glibc" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" RUBY_TARGETS="ruby18 jruby ruby19" USERLAND="GNU" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, LC_ALL, LINGUAS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, PORTDIR_OVERLAY
Created attachment 219653 [details] Build log
Fixed. Was actually some borked code in the python.eclass. Arfrever will fix it and I added a python version fix in the ebuild.
