* apache2 has detected a syntax error in your configuration files: apache2: Syntax error on line 169 of /etc/apache2/httpd.conf: Syntax error on line 4 of /etc/apache2/modules.d/70_mod_php5.conf: Cannot load /usr/lib64/apache2/modules/libphp5.so into server: libdb-4.6.so: cannot open shared object file: No such file or directory So, it would appear that the portage did not preserve the libdb. [00:18 root@joseph ~] # equery list portage [ Searching for package 'portage' in all categories among: ] * installed packages [I--] [ ] app-portage/portage-utils-0.2.1 (0) [I--] [ ~] sys-apps/portage-2.2_rc60 (0) "revdep-rebuild -p" picked it up
Please post your `emerge --info' too.
tdanotebook ~ # emerge --info Portage 2.2_rc60 (default/linux/amd64/10.0/desktop, gcc-4.3.4, glibc-2.9_p20081201-r2, 2.6.31-gentoo-r6 x86_64) ================================================================= System uname: Linux-2.6.31-gentoo-r6-x86_64-Intel-R-_Core-TM-2_Duo_CPU_P8700_@_2.53GHz-with-gentoo-1.12.13 Timestamp of tree: Fri, 18 Dec 2009 04:30:23 +0000 app-shells/bash: 4.0_p35 dev-java/java-config: 1.3.7-r1, 2.1.9-r1 dev-lang/python: 2.4.6, 2.5.4-r3, 2.6.4 dev-python/pycrypto: 2.1.0_beta1 dev-util/cmake: 2.6.4-r3 sys-apps/baselayout: 1.12.13 sys-apps/sandbox: 2.2 sys-devel/autoconf: 2.13, 2.63-r1 sys-devel/automake: 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10.2 sys-devel/binutils: 2.18-r3 sys-devel/gcc-config: 1.4.1 sys-devel/libtool: 2.2.6b virtual/os-headers: 2.6.27-r2 ACCEPT_KEYWORDS="amd64" ACCEPT_LICENSE="*" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-O2 -march=core2 -fomit-frame-pointer -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/X11/xkb /usr/share/config" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/php/apache2-php5/ext-active/ /etc/php/cgi-php5/ext-active/ /etc/php/cli-php5/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c /etc/udev/rules.d" CXXFLAGS="-O2 -pipe" DISTDIR="/usr/portage/distfiles" FEATURES="assume-digests buildpkg distlocks fixpackages news parallel-fetch preserve-libs preserved-libs protect-owned sfperms strict unmerge-logs unmerge-orphans userfetch" GENTOO_MIRRORS="http://distfiles.gentoo.org http://distro.ibiblio.org/pub/linux/distributions/gentoo" LDFLAGS="-Wl,-O1" MAKEOPTS="-j5" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/usr/local/portage" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="X a52 aac acl acpi alsa amd64 apache2 audiofile avi bash-completion berkdb bitmap-fonts branding bzip2 cairo cdr cgi cli consolekit cracklib crypt ctype cups cupsddk cxx dba dbus divx4linux dlloader dri dts dv dvd dvdr dvdread eds emboss encode esd ethereal evo exif expat faac fam fame fastbuild fax ffmpeg firefox flac foomaticdb force-cgi-redirect fortran ftp gd gdbm gif gimp glut gmp gnome gpm gstreamer gtk gtk2 gtkhtml guile hal iconv icq id3 idn imlib ipv6 java jpeg kde kpathsea lame lcms ldap libg++ libnotify libwww mad madwifi melt memlimit midi mikmod mmx mng modules motif mozilla mp3 mp4 mp4live mpeg mpeg2 mppe-mppc mppemppc msn mudflap multilib mysql ncurses networking nls nptl nptlonly nsplugin ogg opengl openmp oracle oscar oss pam pcre pdf pdflib perl php png posix postgres ppds ppp pppd python qt qt3 qt3support qt4 quicktime readline reflection samba scanner sdl session simplexml slang smp snmp soap sockets spell spl sql sse sse2 ssl startup-notification subtitles subversion svg sysfs tcltk tcpd threads thunar tiff tokenizer truetype truetype-fonts type1-fonts udev unicode usb v4l v4l2 vhosts vim-syntax vorbis webkit winbind x264 xinerama xml xml2 xmms xorg xsl xulrunner xv xvid yahoo zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias proxy proxy_ajp proxy_balancer proxy_connect proxy_http auth_digest proxy_ftp" ELIBC="glibc" INPUT_DEVICES="synaptics evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="vesa fbdev intel radeon radeonhd ati fglrx" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, INSTALL_MASK, LANG, LC_ALL, LINGUAS, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Did this happen following an upgrade in the sys-libs/db:4.6 slot? If so, what were the initial and final versions (/var/log/emerge.log will show)? If the sys-libs/db:4.6 slot is no longer installed, then how did it get uninstalled? The --depclean code in portage-2.2 is supposed to prevent such packages from being automatically removed.
I am not entirely certain what happened. I'm showing one on Dec 6, but my upgrade was MUCH more recent than that (the day I posted the bug). So, either I didn't reboot after the last update, or something else is happening. Perhaps I simply didn't reboot. So, if this is supposed to be prevented in 2.2, was a bug fixed in that area after Dec 6? [18:19 root@joseph ~] # genlop -l | grep sys-libs/db Thu Apr 9 22:28:14 2009 >>> sys-libs/db-4.5.20_p2-r1 Sun Jun 7 13:28:34 2009 >>> sys-libs/db-4.6.21_p4 Sun Dec 6 00:12:36 2009 >>> sys-libs/db-4.7.25_p4
The thing is, sys-libs/db has a SLOT for each soname, so preserve-libs typically doesn't become involved. For example, sys-libs/db-4.6.21_p4 and sys-libs/db-4.7.25_p4 can be installed simultaneously, so there's no preserve-libs action in that upgrade. Like I already asked, is sys-libs/db:4.6 installed or not? If so, it should be providing the library in question. You can see which versions are installed like this: portageq match / sys-libs/db If sys-libs/db-4.6.21_p4 is still installed, you can list it's contents like this: portageq contents / sys-libs/db-4.6.21_p4 If it's installed, you should check whether or not libdb-4.6.so is listed in the contents, and you should also check if the file actually exists.
Oh, right, it's a slot, and would have just remained. It appears that it got unmerged somehow, on Dec 8th, so apparently I must not have rebooted. I guess this is probably resolved then.
Ok, I guess it's invalid then.
