/bin/sh ./libtool --tag=CC --mode=link x86_64-pc-linux-gnu-gcc -march=core2 -O3 -pipe -version-info 14:0:14 -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -o libgsl.la -rpath /usr/lib64 version.lo block/libgslblock.la blas/libgslblas.la bspline/libgslbspline.la complex/libgslcomplex.la cheb/libgslcheb.la dht/libgsldht.la diff/libgsldiff.la deriv/libgslderiv.la eigen/libgsleigen.la err/libgslerr.la fft/libgslfft.la fit/libgslfit.la histogram/libgslhistogram.la ieee-utils/libgslieeeutils.la integration/libgslintegration.la interpolation/libgslinterpolation.la linalg/libgsllinalg.la matrix/libgslmatrix.la min/libgslmin.la monte/libgslmonte.la multifit/libgslmultifit.la multimin/libgslmultimin.la multiroots/libgslmultiroots.la ntuple/libgslntuple.la ode-initval/libgslodeiv.la permutation/libgslpermutation.la combination/libgslcombination.la poly/libgslpoly.la qrng/libgslqrng.la randist/libgslrandist.la rng/libgslrng.la roots/libgslroots.la siman/libgslsiman.la sort/libgslsort.la specfunc/libgslspecfunc.la statistics/libgslstatistics.la sum/libgslsum.la sys/libgslsys.la test/libgsltest.la utils/libutils.la vector/libgslvector.la cdf/libgslcdf.la wavelet/libgslwavelet.la ./cblas/libgslcblas.la -lm libtool: link: x86_64-pc-linux-gnu-gcc -shared .libs/version.o -Wl,--whole-archive block/.libs/libgslblock.a blas/.libs/libgslblas.a bspline/.libs/libgslbspline.a complex/.libs/libgslcomplex.a cheb/.libs/libgslcheb.a dht/.libs/libgsldht.a diff/.libs/libgsldiff.a deriv/.libs/libgslderiv.a eigen/.libs/libgsleigen.a err/.libs/libgslerr.a fft/.libs/libgslfft.a fit/.libs/libgslfit.a histogram/.libs/libgslhistogram.a ieee-utils/.libs/libgslieeeutils.a integration/.libs/libgslintegration.a interpolation/.libs/libgslinterpolation.a linalg/.libs/libgsllinalg.a matrix/.libs/libgslmatrix.a min/.libs/libgslmin.a monte/.libs/libgslmonte.a multifit/.libs/libgslmultifit.a multimin/.libs/libgslmultimin.a multiroots/.libs/libgslmultiroots.a ntuple/.libs/libgslntuple.a ode-initval/.libs/libgslodeiv.a permutation/.libs/libgslpermutation.a combination/.libs/libgslcombination.a poly/.libs/libgslpoly.a qrng/.libs/libgslqrng.a randist/.libs/libgslrandist.a rng/.libs/libgslrng.a roots/.libs/libgslroots.a siman/.libs/libgslsiman.a sort/.libs/libgslsort.a specfunc/.libs/libgslspecfunc.a statistics/.libs/libgslstatistics.a sum/.libs/libgslsum.a sys/.libs/libgslsys.a test/.libs/libgsltest.a utils/.libs/libutils.a vector/.libs/libgslvector.a cdf/.libs/libgslcdf.a wavelet/.libs/libgslwavelet.a -Wl,--no-whole-archive -Wl,-rpath -Wl,/var/tmp/portage/sci-libs/gsl-1.13-r1/work/gsl-1.13/cblas/.libs -Wl,--as-needed ./cblas/.libs/libgslcblas.so /usr/bin /usr/sbin /bin /sbin -lm -march=core2 -Wl,-O1 -Wl,--sort-common -Wl,-soname -Wl,libgsl.so.0 -o .libs/libgsl.so.0.14.0 /usr/bin: file not recognized: Is a directory collect2: ld returned 1 exit status make[2]: *** [libgsl.la] Error 1 make[2]: Leaving directory `/var/tmp/portage/sci-libs/gsl-1.13-r1/work/gsl-1.13' make[1]: *** [all-recursive] Error 1 make[1]: Leaving directory `/var/tmp/portage/sci-libs/gsl-1.13-r1/work/gsl-1.13' make: *** [all] Error 2 * * ERROR: sci-libs/gsl-1.13-r1 failed. * Call stack: * ebuild.sh, line 49: Called src_compile * environment, line 3143: Called _eapi2_src_compile * ebuild.sh, line 638: Called die * The specific snippet of code: * emake || die "emake failed" * The die message: * emake failed * * If you need support, post the topmost build error, and the call stack if relevant. * A complete build log is located at '/usr/portagelog/sci-libs:gsl-1.13-r1:20090926-084403.log'. * The ebuild environment file is located at '/var/tmp/portage/sci-libs/gsl-1.13-r1/temp/environment'. * >>> Failed to emerge sci-libs/gsl-1.13-r1, Log file: Reproducible: Always Steps to Reproduce: 1.emerge -1av gsl 2. 3.
Portage 2.2_rc41 (default/linux/amd64/2008.0, gcc-4.3.3, glibc-2.9_p20081201-r2, 2.6.31.00-std130-amd64 x86_64) ================================================================= System uname: Linux-2.6.31.00-std130-amd64-x86_64-Pentium-R-_Dual-Core_CPU_T4200_@_2.00GHz-with-gentoo-2.1.6 Timestamp of tree: Fri, 25 Sep 2009 05:30:14 +0000 app-shells/bash: 4.0_p33 dev-java/java-config: 2.1.9-r1 dev-lang/python: 2.6.2-r1 dev-util/cmake: 2.6.4-r2 sys-apps/baselayout: 2.1.6 sys-apps/openrc: 0.5.0-r2 sys-apps/sandbox: 2.1 sys-devel/autoconf: 2.13, 2.63-r1 sys-devel/automake: 1.8.5-r3, 1.9.6-r2, 1.10.2, 1.11 sys-devel/binutils: 2.19.1-r1 sys-devel/gcc-config: 1.4.1 sys-devel/libtool: 2.2.6a virtual/os-headers: 2.6.29 ACCEPT_KEYWORDS="amd64 ~amd64" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=core2 -O3 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/config" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/sandbox.d /etc/terminfo /etc/udev/rules.d" CXXFLAGS="-march=core2 -O3 -pipe" DISTDIR="/usr/distfiles" FEATURES="assume-digests ccache distcc distlocks fixpackages installsources parallel-fetch preserve-libs protect-owned sandbox sfperms strict test unmerge-logs unmerge-orphans userfetch userpriv usersandbox" GENTOO_MIRRORS="http://mirror.yandex.ru/gentoo-distfiles http://distfiles.gentoo.org" LANG="en_US.UTF-8" LDFLAGS="-Wl,-O1 -Wl,--sort-common -Wl,--as-needed" MAKEOPTS="-j3" PKGDIR="/usr/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/usr/local/portage" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="X acl acpi afs alac alsa amd64 apm bash-completion bcmath berkdb blas bzip2 cdr clamav cli cracklib crypt cups cvs cxx dbus djvu dri dvd dvdr dvdread emacs encode flac fortran gdbm gif gpm gstreamer hal handbook iconv icq ipv6 isdnlog jpeg kde lame lapack mad matroska mmx mng modules mp3 mpeg mudflap multilib mysql ncurses nls nptl nptlonly ogg opengl openmp pam pcre pdf perl png pppd python qt3support qt4 readline reflection ruby session skype smp spl sql sse sse2 ssl svg sysfs tcpd threads tiff truetype unicode vorbis wavpack webkit wxwidgets xml xorg yahoo zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" ELIBC="glibc" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" USERLAND="GNU" VIDEO_CARDS="nv" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
funtoo linux :)
Is bug 284480 relevant in your case ?
bug were solved by excluding USE="threads" from global settings in /etc/make.conf
and "emerge -uDN" recompilation
