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Bug 284257 - Problem emerging sci-libs/blas-atlas-3.8.0 (timings)
Summary: Problem emerging sci-libs/blas-atlas-3.8.0 (timings)
Status: RESOLVED NEEDINFO
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: High normal (vote)
Assignee: Gentoo Science Related Packages
URL:
Whiteboard:
Keywords:
Depends on:
Blocks: 372323
  Show dependency tree
 
Reported: 2009-09-09 12:37 UTC by Pierre
Modified: 2012-04-23 18:40 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---


Attachments
Build log file (build.log.gz,93.27 KB, application/octet-stream)
2009-09-09 12:46 UTC, Pierre
Details

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Description Pierre 2009-09-09 12:37:08 UTC
[...]
make[2]: Entering directory `/var/tmp/portage/sci-libs/blas-atlas-3.8.0/work/ATLAS/gentoo-build/bin'
cd /var/tmp/portage/sci-libs/blas-atlas-3.8.0/work/ATLAS/gentoo-build ; make error_report
make[3]: Entering directory `/var/tmp/portage/sci-libs/blas-atlas-3.8.0/work/ATLAS/gentoo-build'
make -f Make.top error_report
make[4]: Entering directory `/var/tmp/portage/sci-libs/blas-atlas-3.8.0/work/ATLAS/gentoo-build'
uname -a 2>&1 >> bin/INSTALL_LOG/ERROR.LOG
x86_64-pc-linux-gnu-gcc -v 2>&1  >> bin/INSTALL_LOG/ERROR.LOG
Using built-in specs.
Target: x86_64-pc-linux-gnu
Configured with: /var/tmp/portage/sys-devel/gcc-4.3.2-r3/work/gcc-4.3.2/configure --prefix=/usr --bindir=/usr/x86_64-pc-linux-gnu/gcc-bin/4.3.2 --includedir=/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.2/include --datadir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.3.2 --mandir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.3.2/man --infodir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.3.2/info --with-gxx-include-dir=/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.2/include/g++-v4 --host=x86_64-pc-linux-gnu --build=x86_64-pc-linux-gnu --disable-altivec --disable-fixed-point --enable-nls --without-included-gettext --with-system-zlib --disable-checking --disable-werror --enable-secureplt --enable-multilib --enable-libmudflap --disable-libssp --enable-libgomp --enable-java-awt=gtk --enable-languages=c,c++,java,treelang,fortran --enable-shared --enable-threads=posix --enable-__cxa_atexit --enable-clocale=gnu --with-bugurl=http://bugs.gentoo.org/ --with-pkgversion='Gentoo 4.3.2-r3 p1.6, pie-10.1.5'
Thread model: posix
gcc version 4.3.2 (Gentoo 4.3.2-r3 p1.6, pie-10.1.5) 
x86_64-pc-linux-gnu-gcc -V 2>&1  >> bin/INSTALL_LOG/ERROR.LOG
x86_64-pc-linux-gnu-gcc: '-V' option must have argument
make[4]: [error_report] Error 1 (ignored)
x86_64-pc-linux-gnu-gcc --version 2>&1  >> bin/INSTALL_LOG/ERROR.LOG
tar cf error_Core2Duo64SSE3.tar Make.inc bin/INSTALL_LOG/*
gzip --best error_Core2Duo64SSE3.tar
mv error_Core2Duo64SSE3.tar.gz error_Core2Duo64SSE3.tgz
make[4]: Leaving directory `/var/tmp/portage/sci-libs/blas-atlas-3.8.0/work/ATLAS/gentoo-build'
make[3]: Leaving directory `/var/tmp/portage/sci-libs/blas-atlas-3.8.0/work/ATLAS/gentoo-build'
make[2]: Leaving directory `/var/tmp/portage/sci-libs/blas-atlas-3.8.0/work/ATLAS/gentoo-build/bin'
Error report error_<ARCH>.tgz has been created in your top-level ATLAS
directory.  Be sure to include this file in any help request.
cat: ../../CONFIG/error.txt: No such file or directory
cat: ../../CONFIG/error.txt: No such file or directory
make[1]: *** [build] Error 255
make[1]: Leaving directory `/var/tmp/portage/sci-libs/blas-atlas-3.8.0/work/ATLAS/gentoo-build'
make: *** [build] Error 2
Comment 1 Pierre 2009-09-09 12:39:35 UTC
# LC_ALL=C emerge --info
Portage 2.1.6.13 (default/linux/amd64/2008.0, gcc-4.3.2, glibc-2.9_p20081201-r2, 2.6.30-gentoo-r4 x86_64)
=================================================================
System uname: Linux-2.6.30-gentoo-r4-x86_64-Intel-R-_Core-TM-2_CPU_T5500_@_1.66GHz-with-gentoo-1.12.11.1
Timestamp of tree: Tue, 08 Sep 2009 20:45:01 +0000
ccache version 2.4 [disabled]
app-shells/bash:     3.2_p39
dev-java/java-config: 2.1.8-r1
dev-lang/python:     2.6.2-r1
dev-python/pycrypto: 2.0.1-r8
dev-util/ccache:     2.4-r7
dev-util/cmake:      2.6.4
sys-apps/baselayout: 1.12.11.1
sys-apps/sandbox:    1.6-r2
sys-devel/autoconf:  2.13, 2.63-r1
sys-devel/automake:  1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10.2
sys-devel/binutils:  2.18-r3
sys-devel/gcc-config: 1.4.1
sys-devel/libtool:   1.5.26
virtual/os-headers:  2.6.27-r2
ACCEPT_KEYWORDS="amd64"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/share/config"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/php/apache2-php5/ext-active/ /etc/php/cgi-php5/ext-active/ /etc/php/cli-php5/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/splash /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c /etc/udev/rules.d"
CXXFLAGS="-O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FEATURES="distlocks fixpackages parallel-fetch protect-owned sandbox sfperms strict unmerge-orphans userfetch"
GENTOO_MIRRORS="http://mirror.ovh.net/gentoo-distfiles/ "
LANG="fr_FR.UTF-8"
LC_ALL="C"
LDFLAGS="-Wl,-O1"
LINGUAS="fr en de nl"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
SYNC="rsync://rsync.europe.gentoo.org/gentoo-portage"
USE="X Xaw3d a52 aac aalib accessibility acl acpi afs aim alsa amd64 ao apache2 apm arts audiofile avahi bash-completion bcmath berkdb blas bzip2 cairo calendar cddb cdparanoia cdr cli cracklib crypt css ctype cups curl cxx dbus dbx dga directfb doc dri dts dvd dvdr dvdread emacs encode esd exif expat fam fbcon ffmpeg fftw firefox flac fontconfig foomaticdb fortran ftp gcj gd gdbm geoip ggi gif gimp gmp gnome gnutls gpm gsl gstreamer gtk hal hddtemp iconv icq icu idn imagemagick imap imlib innodb ipv6 isdnlog jabber jack javascript jbig jingle jpeg jpeg2k kde kerberos kolab krb4 ladspa lame lash latex lcms ldap libcaca libnotify libsamplerate libwww lirc lm_sensors lzo mad maildir matroska mbox mhash mikmod mime mmx mng modplug motif mozilla mp3 mpeg mplayer msn mudflap multilib musepack musicbrainz mysql mysqli nas ncurses nls nntp nptl nptlonly nsplugin odbc ogg openal opengl openmp osc oscar pam pcmcia pcre pda pdf perl php plotutils png portaudio posix postgres pppd pulseaudio python qt4 quicktime raw readline recode reflection rss samba sasl scanner sdl session sharedext sharedmem shorten simplexml sndfile sockets sox speex spell spl sqlite sse sse2 ssl startup-notification subversion svg symlink sysfs syslog sysvipc szip taglib tcl tcpd theora threads tidy tiff timidity tk truetype unicode usb vhosts vorbis wavpack wifi wmf wxwindows x264 xcb xcomposite xft xine xml xorg xosd xpm xprint xscreensaver xsl xulrunner xv xvid yahoo zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" ELIBC="glibc" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="fr en de nl" USERLAND="GNU" VIDEO_CARDS="nv"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, INSTALL_MASK, MAKEOPTS, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, PORTDIR_OVERLAY
Comment 2 Pierre 2009-09-09 12:46:34 UTC
Created attachment 203583 [details]
Build log file

It is gzipped because it was too big
Comment 3 Rafał Mużyło 2009-09-09 16:42:54 UTC
Well, the very first error seems to be:
CANNOT GET TIMINGS IN TOLERANCE, EXITING!!

      N=5000, tim=1.704327e-05
      N=5000, tim=1.704327e-05
      N=5000, tim=1.319479e-05
      N=5000, tim=1.319479e-05
      N=5000, tim=1.099566e-05
      N=5000, tim=1.429435e-05
      N=5000, tim=1.374457e-05
      N=5000, tim=1.429435e-05
      N=5000, tim=1.209522e-05
      N=5000, tim=1.484414e-05
make[8]: *** [dasumcase] Error 11

As build process of this lib is quite fragile
(for reasons ranging from overclocking to bad weather)
it may be hard to tell what exactly went wrong.
Comment 4 Andreas K. Hüttel archtester gentoo-dev 2010-08-19 18:43:30 UTC
Is this problem reproducible?

Does it also happen with MAKEOPTS=-j1 ?
Comment 5 Pacho Ramos gentoo-dev 2012-04-23 18:40:20 UTC
(In reply to comment #4)
> Is this problem reproducible?
> 
> Does it also happen with MAKEOPTS=-j1 ?

Also check with latest testing version