Portage 2.1.6.13 (!../var/cache/portage/tree/profiles/default/linux/x86/2008.0, gcc-4.4.1-asneeded, glibc-2.10.1-r0, 2.6.30-gentoo-r4 i686) ================================================================= System uname: Linux-2.6.30-gentoo-r4-i686-Quad-Core_AMD_Opteron-tm-_Processor_2350-with-gentoo-2.0.1 Timestamp of tree: Sat, 25 Jul 2009 11:30:01 +0000 ccache version 2.4 [enabled] app-shells/bash: 4.0_p28 dev-java/java-config: 1.3.7-r1, 2.1.8-r1 dev-lang/python: 2.6.2-r1 dev-python/pycrypto: 2.0.1-r8 dev-util/ccache: 2.4-r8 dev-util/cmake: 2.6.4-r1 sys-apps/baselayout: 2.0.1 sys-apps/openrc: 0.4.3-r3 sys-apps/sandbox: 2.0 sys-devel/autoconf: 2.13, 2.63-r1 sys-devel/automake: 1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10.2, 1.11 sys-devel/binutils: 2.19.1-r1 sys-devel/gcc-config: 1.4.1 sys-devel/libtool: 2.2.6a virtual/os-headers: 2.6.30 ACCEPT_KEYWORDS="x86 ~x86" CBUILD="i686-pc-linux-gnu" CFLAGS="-O2 -pipe" CHOST="i686-pc-linux-gnu" CONFIG_PROTECT="/etc /opt/glftpd/etc /opt/glftpd/ftp-data /opt/openfire/resources/security/ /opt/openjms/config /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/lib/ccs/conf /usr/lib/fax /usr/share/bufrtables /usr/share/config /var/bind /var/lib/hsqldb /var/phxd /var/qmail/alias /var/qmail/control /var/spool/fax/etc /var/spool/torque /var/vpopmail/etc" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/eselect/postgresql /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5/ext-active/ /etc/php/cgi-php5/ext-active/ /etc/php/cli-php5/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c /etc/udev/rules.d" CXXFLAGS="-O2 -pipe" DISTDIR="/var/cache/distfiles" FEATURES="ccache distlocks fixpackages parallel-fetch protect-owned sandbox sfperms strict test test-fail-continue unmerge-orphans userfetch" GENTOO_MIRRORS="http://linux.rz.ruhr-uni-bochum.de/download/gentoo-mirror/ http://ftp.uni-erlangen.de/pub/mirrors/gentoo" INSTALL_MASK=" /usr/share/doc /usr/share/man /usr/share/info" LDFLAGS="-Wl,-O1" MAKEOPTS="-j14" PKGDIR="/var/spool/portage/packages" PORTAGE_COMPRESS="" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/var/cache/portage/tree-tinderbox" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="acl berkdb bzip2 cli cracklib crypt cups dri fortran gdbm gpm iconv ipv6 isdnlog java5 java6 midi mudflap ncurses nls nostatic nptl nptlonly openmp pam pcre perl pppd python qt3support readline reflection ruby session spl ssl sysfs tcpd unicode x86 xorg zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1 emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" ELIBC="glibc" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" USERLAND="GNU" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, LANG, LC_ALL, LINGUAS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, PORTDIR_OVERLAY
Created attachment 199216 [details] Build log
Now I actually get a different result: Testing ParMETIS_V3_NodeND with options[1-3] = {3 1 2} SepSizes: 556 [49321 49740] SepSizes: 688 [25462 23171] 876 [23331 25533] Setup: Max: 0.016, Sum: 0.063, Balance: 1.008 Matching: Max: 0.032, Sum: 0.128, Balance: 1.000 Contraction: Max: 0.075, Sum: 0.273, Balance: 1.105 InitPart: Max: 0.007, Sum: 0.029, Balance: 1.001 Project: Max: 0.003, Sum: 0.012, Balance: 1.088 Initialize: Max: 0.010, Sum: 0.040, Balance: 1.005 K-way: Max: 0.008, Sum: 0.031, Balance: 1.074 Move: Max: 0.051, Sum: 0.203, Balance: 1.000 Total: Max: 0.826, Sum: 3.302, Balance: 1.000 mpirun -np 4 mtest ../Graphs/bricks.hex3d 2 MTest -- C client test program MTest -- C client test program MTest -- C client test program MTest -- C client test program Debug protocol (y/n)?Mailbox ('?' for help): ?Can't open mailbox ROOT: no such mailbox Debug protocol (y/n)?Mailbox ('?' for help): ?Can't open mailbox ROOT: no such mailbox Mailbox ('?' for help): ?Can't open mailbox ROOT: no such mailbox [snip almost 30G (!!!) of the same lines] Mailbox ('?' for help): ?Can't open mailbox ROOT: no such mailbox Mailbox ('?' for help): ?Can't open mailbox ROOT: no such mailbox [tinderbox:05170] *** Process received signal *** [tinderbox:05170] Signal: Segmentation fault (11) [tinderbox:05170] Signal code: Address not mapped (1) [tinderbox:05170] Failing at address: 0x14 [tinderbox:05170] [ 0] [0x55571410] [tinderbox:05170] [ 1] /usr/lib/openmpi/mca_iof_hnp.so [0x558749c3] [tinderbox:05170] [ 2] /usr/lib/libopen-pal.so.0 [0x55678cb0] [tinderbox:05170] [ 3] /usr/lib/libopen-pal.so.0(opal_event_loop+0x27) [0x55678ee7] [tinderbox:05170] [ 4] /usr/lib/libopen-pal.so.0(opal_event_dispatch+0x1e) [0x55678f0e] [tinderbox:05170] [ 5] mpirun [0x804af62] [tinderbox:05170] [ 6] mpirun [0x804a46f] [tinderbox:05170] [ 7] /lib/libc.so.6(__libc_start_main+0xe5) [0x556f5a65] [tinderbox:05170] [ 8] mpirun [0x804a3a1] [tinderbox:05170] *** End of error message *** make[2]: *** [check-local] Segmentation fault make[2]: Leaving directory `/var/tmp/portage/sci-libs/parmetis-3.1.1/work/ParMetis-3.1.1/Programs' make[1]: *** [check-am] Error 2 make[1]: Leaving directory `/var/tmp/portage/sci-libs/parmetis-3.1.1/work/ParMetis-3.1.1/Programs' make: *** [check-recursive] Error 1
flame@yamato sci-libs % ls -l parmetis-3.1.1:20090822-030641.log; ls -lh parmetis-3.1.1:20090822-030641.log -rw-rw---- 1 portage portage 31823307660 2009-08-22 10:50 parmetis-3.1.1:20090822-030641.log -rw-rw---- 1 portage portage 30G 2009-08-22 10:50 parmetis-3.1.1:20090822-030641.log
It should be fixed by now. Re-open if the failures are still showing
