# cat /var/tmp/portage/sci-libs/metis-4.0.1-r1/temp/build.log >>> Unpacking source... >>> Unpacking metis-4.0.tar.gz to /var/tmp/portage/sci-libs/metis-4.0.1-r1/work * Applying metis-4.0.1-autotools.patch ... [ ok ] * Running eautoreconf in '/var/tmp/portage/sci-libs/metis-4.0.1-r1/work/metis-4.0' ... * Running aclocal ... [ ok ] * Running libtoolize --copy --force --install --automake ... [ ok ] * Running aclocal ... [ ok ] * Running autoconf ... [ ok ] * Running autoheader ... [ ok ] * Running automake --add-missing --copy --foreign ... [ ok ] * Running elibtoolize in: metis-4.0 * Applying sed-1.5.6.patch ... >>> Source unpacked in /var/tmp/portage/sci-libs/metis-4.0.1-r1/work >>> Compiling source in /var/tmp/portage/sci-libs/metis-4.0.1-r1/work/metis-4.0 ... * econf: updating metis-4.0/config.guess with /usr/share/gnuconfig/config.guess * econf: updating metis-4.0/config.sub with /usr/share/gnuconfig/config.sub ./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --libdir=/usr/lib64 checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking for a BSD-compatible install... /usr/bin/install -c checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for style of include used by make... GNU checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed checking dependency style of x86_64-pc-linux-gnu-gcc... gcc3 checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r checking for x86_64-pc-linux-gnu-objdump... x86_64-pc-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib checking command to parse /usr/bin/nm -B output from x86_64-pc-linux-gnu-gcc object... ok checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for sqrt in -lm... yes configure: creating ./config.status config.status: creating Makefile config.status: creating metis.pc config.status: creating Lib/Makefile config.status: creating Programs/Makefile config.status: creating Test/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands make -j3 make all-recursive make[1]: Entering directory `/var/tmp/portage/sci-libs/metis-4.0.1-r1/work/metis-4.0' Making all in Lib make[2]: Entering directory `/var/tmp/portage/sci-libs/metis-4.0.1-r1/work/metis-4.0/Lib' /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -march=athlon64 -O2 -pipe -fomit-frame-pointer -MT coarsen.lo -MD -MP -MF .deps/coarsen.Tpo -c -o coarsen.lo coarsen.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -march=athlon64 -O2 -pipe -fomit-frame-pointer -MT fm.lo -MD -MP -MF .deps/fm.Tpo -c -o fm.lo fm.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -march=athlon64 -O2 -pipe -fomit-frame-pointer -MT initpart.lo -MD -MP -MF .deps/initpart.Tpo -c -o initpart.lo initpart.c libtool: compile: x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -march=athlon64 -O2 -pipe -fomit-frame-pointer -MT fm.lo -MD -MP -MF .deps/fm.Tpo -c fm.c -fPIC -DPIC -o .libs/fm.o libtool: compile: x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -march=athlon64 -O2 -pipe -fomit-frame-pointer -MT coarsen.lo -MD -MP -MF .deps/coarsen.Tpo -c coarsen.c -fPIC -DPIC -o .libs/coarsen.o libtool: compile: x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -march=athlon64 -O2 -pipe -fomit-frame-pointer -MT initpart.lo -MD -MP -MF .deps/initpart.Tpo -c initpart.c -fPIC -DPIC -o .libs/initpart.o In file included from ./metis.h:36, from initpart.c:16: ./proto.h:462: error: conflicting types for '__log2' /usr/include/bits/mathcalls.h:145: error: previous declaration of '__log2' was here make[2]: *** [initpart.lo] Error 1 make[2]: *** Waiting for unfinished jobs.... In file included from ./metis.h:36, from fm.c:14: ./proto.h:462: error: conflicting types for '__log2' /usr/include/bits/mathcalls.h:145: error: previous declaration of '__log2' was here In file included from ./metis.h:36, from coarsen.c:13: ./proto.h:462: error: conflicting types for '__log2' /usr/include/bits/mathcalls.h:145: error: previous declaration of '__log2' was here make[2]: *** [fm.lo] Error 1 make[2]: *** [coarsen.lo] Error 1 make[2]: Leaving directory `/var/tmp/portage/sci-libs/metis-4.0.1-r1/work/metis-4.0/Lib' make[1]: *** [all-recursive] Error 1 make[1]: Leaving directory `/var/tmp/portage/sci-libs/metis-4.0.1-r1/work/metis-4.0' make: *** [all] Error 2 * * ERROR: sci-libs/metis-4.0.1-r1 failed. * Call stack: * ebuild.sh, line 49: Called src_compile * environment, line 2721: Called _eapi0_src_compile * ebuild.sh, line 600: Called _eapi2_src_compile * ebuild.sh, line 634: Called die * The specific snippet of code: * emake || die "emake failed" * The die message: * emake failed * * If you need support, post the topmost build error, and the call stack if relevant. * A complete build log is located at '/var/tmp/portage/sci-libs/metis-4.0.1-r1/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/sci-libs/metis-4.0.1-r1/temp/environment'. * Reproducible: Always # emerge --info Portage 2.1.6.13 (default/linux/amd64/2008.0, gcc-4.3.3, glibc-2.10.1-r0, 2.6.30-gentoo-r1 x86_64) ================================================================= System uname: Linux-2.6.30-gentoo-r1-x86_64-AMD_Athlon-tm-_64_X2_Dual_Core_Processor_6000+-with-gentoo-2.0.1 Timestamp of tree: Sun, 28 Jun 2009 07:15:01 +0000 app-shells/bash: 4.0_p24 dev-java/java-config: 2.1.8-r1 dev-lang/python: 2.6.2-r1 dev-util/cmake: 2.6.4 sys-apps/baselayout: 2.0.1 sys-apps/openrc: 0.4.3-r3 sys-apps/sandbox: 2.0 sys-devel/autoconf: 2.13, 2.63-r1 sys-devel/automake: 1.5, 1.9.6-r2, 1.10.2, 1.11 sys-devel/binutils: 2.19.1-r1 sys-devel/gcc-config: 1.4.1 sys-devel/libtool: 2.2.6a virtual/os-headers: 2.6.29 ACCEPT_KEYWORDS="amd64 ~amd64" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=athlon64 -O2 -pipe -fomit-frame-pointer" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /var/lib/hsqldb" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5/ext-active/ /etc/php/cgi-php5/ext-active/ /etc/php/cli-php5/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c /etc/udev/rules.d" CXXFLAGS="-march=athlon64 -O2 -pipe -fomit-frame-pointer" DISTDIR="/usr/portage/distfiles" FEATURES="distlocks fixpackages parallel-fetch protect-owned sandbox sfperms strict unmerge-orphans userfetch" GENTOO_MIRRORS="ftp://mirror.yandex.ru/gentoo-distfiles/ " LANG="en_US.UTF-8" LC_ALL="" LDFLAGS="-Wl,-O1" LINGUAS="en en_US" MAKEOPTS="-j3" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" SYNC="rsync://rsync.europe.gentoo.org/gentoo-portage" USE="3dnow 3dnowext 7zip X a52 aac aalib accessibility alsa amd64 ao ass audiofile branding bzip2 cairo cblas cli corefonts crypt css cups curl cvs d dga dirac djvu dri dts dvd encode exif expat faac faad ffmpeg fftw flac fontconfig fortran gcj gd ggi gif gimp git glib glitz gmp gnutls gs gtk hdri iconv id3tag idn imagemagick imlib ipv6 isdnlog java java5 java6 jbig jce jpeg jpeg2k lame lapack latex lcms libcaca lua lzo midi mmx mmxext mng mp3 mpeg mudflap multilib musepack mysql nptl nptlonly objc odbc ogg openal openexr opengl openmp openssl pam pcre pdf perl php plotutils png pnm posix ppds pppd python qt3support qt4 quicktime readline reflection rle scanner sdl servletapi session smp speex spl sqlite sqlite3 sse sse2 sse3 ssl subversion svg sysfs taglib threads tiff truetype umfpack unicode usb vorbis wavpack wmf wxwindows x264 xattr xcb xinerama xml xmp xorg xulrunner xv xvmc zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CAMERAS="fuji" ELIBC="glibc" INPUT_DEVICES="mouse keyboard" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="en en_US" SANE_BACKENDS="gt68xx" USERLAND="GNU" VIDEO_CARDS="nvidia vesa nv" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, INSTALL_MASK, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, PORTDIR_OVERLAY
Fixed in cvs.
