trying to compile example N02: Making dependency for file exampleN02.cc ... Making dependency for file src/ExN02TrackerSD.cc ... Making dependency for file src/ExN02TrackerHit.cc ... Making dependency for file src/ExN02SteppingVerbose.cc ... Making dependency for file src/ExN02SteppingAction.cc ... Making dependency for file src/ExN02RunAction.cc ... Making dependency for file src/ExN02PrimaryGeneratorAction.cc ... Making dependency for file src/ExN02PhysicsList.cc ... Making dependency for file src/ExN02MagneticField.cc ... Making dependency for file src/ExN02EventAction.cc ... Making dependency for file src/ExN02DetectorMessenger.cc ... Making dependency for file src/ExN02DetectorConstruction.cc ... Making dependency for file src/ExN02ChamberParameterisation.cc ... Compiling ExN02ChamberParameterisation.cc ... Compiling ExN02DetectorConstruction.cc ... Compiling ExN02DetectorMessenger.cc ... Compiling ExN02EventAction.cc ... Compiling ExN02MagneticField.cc ... Compiling ExN02PhysicsList.cc ... Compiling ExN02PrimaryGeneratorAction.cc ... Compiling ExN02RunAction.cc ... Compiling ExN02SteppingAction.cc ... Compiling ExN02SteppingVerbose.cc ... Compiling ExN02TrackerHit.cc ... Compiling ExN02TrackerSD.cc ... Creating shared library /afs/f9.ijs.si/home/batic/geant4/tmp/Linux-g++/exampleN02/libexampleN02.so ... Compiling exampleN02.cc ... In file included from exampleN02.cc:42: /usr/include/geant/G4RunManager.hh: In member function ‘void G4RunManager::SetRandomNumberStoreDir(G4String)’: /usr/include/geant/G4RunManager.hh:352: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result Using granular libraries ... Linking exampleN02 ... /afs/f9.ijs.si/home/batic/geant4/tmp/Linux-g++/exampleN02/exe/exampleN02.o: In function `G4VisExecutive::RegisterGraphicsSystems()': exampleN02.cc:(.text+0x47a): undefined reference to `G4OpenGLImmediateX::G4OpenGLImmediateX()' exampleN02.cc:(.text+0x49a): undefined reference to `G4OpenGLStoredX::G4OpenGLStoredX()' exampleN02.cc:(.text+0x4ba): undefined reference to `G4OpenGLImmediateXm::G4OpenGLImmediateXm()' exampleN02.cc:(.text+0x4da): undefined reference to `G4OpenGLStoredXm::G4OpenGLStoredXm()' /afs/f9.ijs.si/home/batic/geant4/tmp/Linux-g++/exampleN02/exe/exampleN02.o: In function `main': exampleN02.cc:(.text+0x855): undefined reference to `G4UIterminal::G4UIterminal(G4VUIshell*, bool)' /usr/lib64/geant4/libG4UIGAG.so: undefined reference to `typeinfo for G4VBasicShell' /usr/lib64/geant4/libG4UIGAG.so: undefined reference to `G4VBasicShell::G4VBasicShell()' /usr/lib64/geant4/libG4OpenInventor.so: undefined reference to `G4VInteractorManager::SecondaryLoop()' /usr/lib64/geant4/libG4OpenInventor.so: undefined reference to `G4VInteractorManager::RequireExitSecondaryLoop(int)' /usr/lib64/geant4/libG4UIGAG.so: undefined reference to `G4VBasicShell::~G4VBasicShell()' collect2: ld returned 1 exit status make: *** [/afs/f9.ijs.si/home/batic/geant4/bin/Linux-g++/exampleN02] Error 1 If I tried compiling example N01 (without visualisation), I would get just the undefined references to G4UIterminal, G4VBasicShell, ... emerge -pv geant:4 [ebuild R ] sci-physics/geant-4.9.2-r1 USE="athena data dawn gdml geant3 motif opengl openinventor qt4 raytracerx vrml zlib -debug -examples -global -minimal -static" 0 kB emerge --info Portage 2.2_rc23 (default/linux/amd64/2008.0, gcc-4.3.3, glibc-2.9_p20081201-r1, 2.6.27-gentoo-r7 x86_64) ================================================================= System uname: Linux-2.6.27-gentoo-r7-x86_64-Dual-Core_AMD_Opteron-tm-_Processor_2214-with-glibc2.2.5 Timestamp of tree: Mon, 23 Feb 2009 08:20:01 +0000 distcc 2.18.3 x86_64-pc-linux-gnu (protocols 1 and 2) (default port 3632) [enabled] ccache version 2.4 [disabled] app-shells/bash: 3.2_p48-r1 dev-java/java-config: 1.3.7-r1, 2.1.7 dev-lang/python: 2.4.4-r4, 2.5.4-r2 dev-python/pycrypto: 2.0.1-r6 dev-util/ccache: 2.4-r8 dev-util/cmake: 2.6.2-r1 sys-apps/baselayout: 2.0.0 sys-apps/openrc: 0.4.3-r1 sys-apps/sandbox: 1.3.7 sys-devel/autoconf: 2.13, 2.63 sys-devel/automake: 1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10.2 sys-devel/binutils: 2.19.1 sys-devel/gcc-config: 1.4.1 sys-devel/libtool: 2.2.6a virtual/os-headers: 2.6.28-r1 ACCEPT_KEYWORDS="amd64 ~amd64" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-O2 -march=k8 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/kde/4.2/env /usr/kde/4.2/share/config /usr/kde/4.2/shutdown /usr/share/config /var/bind /var/lib/hsqldb" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/eselect/postgresql /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/grid-security/certificates /etc/php/apache2-php5/ext-active/ /etc/php/cgi-php5/ext-active/ /etc/php/cli-php5/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c /etc/udev/rules.d" CXXFLAGS="-O2 -march=k8 -pipe" DISTDIR="/d0/nfs/gentoo/distfiles" EMERGE_DEFAULT_OPTS="--with-bdeps y" FEATURES="buildpkg distcc distlocks fixpackages parallel-fetch preserve-libs protect-owned sandbox sfperms strict unmerge-orphans userfetch" GENTOO_MIRRORS=" http://ftp.heanet.ie/pub/gentoo ftp://ftp.ipv6.uni-muenster.de/pub/linux/distributions/gentoo http://ftp.gentoo.skynet.be/pub/gentoo" LANG="en_US.UTF-8" LDFLAGS="-Wl,-O1" LINGUAS="en sl" MAKEOPTS="-j6" PKGDIR="/d0/nfs/gentoo/packages/amd64.gcc4" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/usr/portage/local/layman/desktop-effects /usr/portage/local/layman/xemacs /usr/portage/local/layman/sunrise /usr/portage/local/layman/java-overlay /usr/portage/local/layman/kde-testing /usr/portage/local/layman/vmware /d0/nfs/gentoo/portage.local SYNC="rsync://rsync.europe.gentoo.org/gentoo-portage" USE="3dnow 3dnowext X Xaw3d a52 aac aalib accessibility accounting acl acpi addressbook admin ads afs aiglx aio akonadi alsa amarok amd64 amr amrnb amrwb ansi ao apache2 applet arts asf athena atlas automount avahi bash-completion bcmath beagle berkdb bidi binfiltblas bluetooth bonjour bonobo branding bzip2 cairo calendar canvas caps cdaudio cdb cddb cdio cdparanoia cdr cern chm cjk clamav clarens cli cmake colordiff console context cpudetection cracklib crciprec crypt css ctype cups curl curlwrappers cvs cyrillic cyrus dan dba dbm dbox2 dbus dc1394 dedicated deprecated designer-plugin device-mapper dga dia dirac directfb diskio divx4linux djvu dlloader doc dri dssi dts dv dvb dvd dvdnav dvdr dvi edl eds elf elisp emacs emacs-w3 enblend enca encode esd exif exiv2 expat extensible eame fastcgi fat fbcon festival ffmpeg fftw filepicker firefox fits flac flatfile float fluidsynth font-server foomaticdb fortran fping freebox freetts ftp fuse gadu galago games gcj gcl gd gdbm gdml geant3 geant4 geolocation gif gimp gimpprint glib glitz gmp gnokie gnuplot gnutls gphoto2 gpm gps graphics graphviz groupwise gsf gstreamer gtk gtk2 gtkhtml guile hal hash hdhomerun hfs howl hpn htmlhandbook humanities hyperestraier ical iconv id3tag idn ieee1394 ifp imagemagick imap imlib inkjar innodb inotify iodbc ipod ipv6 sdnlog ithreads ivtv jack jadetex java java5 javascript jfs jingle joystick jpeg jpeg2k json junit kde kdeprefix kerberos keyring kig-scripting kpathsea krb4 ktts ladspa lapack laptop latex lcd lcms ldap ldap-sasl ldapsam libcaca libclamav libnotify libsamplerate ive lm_sensors logrotate lua lyx lzo mad maps math matroska mbox mcve md5sum mdnsresponder-compat meanwhile messenger mfd-rewrites mhash midi mikmod mime mjpeg mmx mmxext mng modplug mono mozbranding mozdevelop mozilla mozsvg mp2 mp3 mp3tunes mp4 mpeg mpi mplayer p mudflap mule multilib musepack music musicbrainz mysql mysqli nagios-dns nagios-ntp nagios-ping nas nautilus ncurses nemesi network networking networkmanager newxkb njb nls nptl nptlonly nsplugin ntfs nvidia nvtv nxclient objc odbc odk ogg ole omega openal openengl openinventor openmp oscar oss overlays pam pcmcia pcntl pcre pda pdf pdo pear perl perlsuid php pic plasma plotutils png pnm portaudio posix postfix postgres postgresql postscript povray ppds pppd prediction pstricks publishers pulseaudio pvr pythia6 pythia8 pqmake qq qt qt-static qt3 qt3support qt4 quicktime quotas radio rar rdesktop reaa readline redeyes reflection regex reiser4 reiserfs rpc rtc ruby samba sasl sbcl scanner schroedinger science sdl sdl-image seamonkey semantic-desktop sendmail server session sift silercity simplexml skey slang slp smime sms smux sndfile snmp soap sockets solver sound sox speex spell spl sql sqlite sqlite3 srt sse sse2 ssl ssse3 startup-notification subtitles subversion suhosin svg sysfs sysvipc t1lib taglib tcltk tcpd teletext tetex tex4ht tgra threads thunderbird tidy tiff tk tokenizer transcode truetype truetype-fonts twolame type1-fonts unicode upnp usb utempter utf8 v4l v4l2 vcd vcdx vhosts vim-syntax visualization vorbis wavpack wddx webdav webkit wifi wmf wmn wxwindows x264 xanim xattr xcb xcompxetex xface xfs xim xine xinerama xml xml2 xmlreader xmlrpc xmlwriter xmp xorg xpm xrootd xscreensaver xsl xulrunner xv xvid xvmc yaz zephyr zip zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 tel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvolHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache fheaders include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias proxy auth_digest authn_dbd asis cern_meta charset_lite dbd dumpio ident imagemap log_forensic proxy_ajp proxy_balanoxy_connect proxy_ftp proxy_http version substitute" ELIBC="glibc" INPUT_DEVICES="evdev keyboard mouse synaptics" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="en sl" USERLAND="GNU" VIDEO_CARDS="fbdev g810 mga neomagic nv radeon savage sis tdfx trident vesa vga via vmware voodoo radeonhd v4l" Unset: CPPFLAGS, CTARGET, FFLAGS, INSTALL_MASK, LC_ALL, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS Besides, there is a typo in geant-4.9.2-r1.ebuild; line 172 is missing a slash and should be: G4RADIOACTIVEDATA="${G4DATA}/$(basename ${WORKDIR}/RadioactiveDecay*)"
(In reply to comment #0) Browsing through emerge log I came across this: Creating shared library /var/tmp/portage/sci-physics/geant-4.9.2-r1/work/geant4.9.2/tmp/libG4UIcommon.so ... /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.2/../../../../x86_64-pc-linux-gnu/bin/ld: cannot find -lQtCore collect2: ld returned 1 exit status distcc[26940] ERROR: compile (null) on localhost failed make[2]: *** [/var/tmp/portage/sci-physics/geant-4.9.2-r1/work/geant4.9.2/tmp/libG4UIcommon.so] Error 1 The problem is that emerge continues. It might be due to building granular... I have libQtCore installed and geant depends on it for building g4ui_build_qt_session. Perhaps adding it to rdepend qt4? would help? qt4? ( || ( x11-libs/qt:4 x11-libs/qt-gui x11-libs/qt-core ) ) Best, m
Hmm... I see that geant4 Configure function only search for libQtCore in /usr/lib or /usr/lib64 (or similar), but doesn't dive into subdirectories. I have libQtCore in /usr/lib/qt4/ hence library is not found. I am now trying to compile ebuild with symbolic link (cd /usr/lib; ln -s qt4/libQtCore.so) Will let you know. Best, m
Nope, it doesn't help: Creating shared library /var/tmp/portage/sci-physics/geant-4.9.2-r1/work/geant4.9.2/tmp/libG4UIcommon.so ... /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../x86_64-pc-linux-gnu/bin/ld: cannot find -lQtGui collect2: ld returned 1 exit status distcc[16161] ERROR: compile (null) on localhost failed make[2]: *** [/var/tmp/portage/sci-physics/geant-4.9.2-r1/work/geant4.9.2/tmp/libG4UIcommon.so] Error 1 (In reply to comment #2) > Hmm... > > I see that geant4 Configure function only search for libQtCore in /usr/lib or > /usr/lib64 (or similar), but doesn't dive into subdirectories. I have libQtCore > in /usr/lib/qt4/ hence library is not found. > > I am now trying to compile ebuild with symbolic link (cd /usr/lib; ln -s > qt4/libQtCore.so) Will let you know. > > Best, > m >
Hi, Thanks for reporting. It looks like the granular libs did not build right. Although the missing Qt libraries problem is fishy, it does not seem to be the problem in building the examples. Also the ebuild does not use the geant Configure script, which is not easy to automate. Anyway, hopefully I'll find some time to go over it. So far I can reproduce the problem.
Hi, looks like this bug is because the library that needs to be linked in doesn't get installed by the ebuild. When geant-4 got added to the tree I actually checked that some examples work (I believe some of the advanced once were broken back then), so I'd like to blame this on an upstream regression. Matej: since example01 doesn't use opengl, could you post your error from there in case in doesn't go away? Patch and rant follow, Benjamin
Created attachment 183313 [details, diff] Get rid of some more variables Well, since Geant-4 is enterprise software it has some safety mechanisms built-in. When we complain about "Configure being very difficult to automate", we actually just had bothered ourselves since we tried to work around these safety mechanisms. Geant-4's safety mechanism is highly modular. It employs a multitude of scripts with names like 'architecture, 'common' etc.; but actually these names are of course only to imply some functionality to the user that isn't provided. These scripts are used to set many variables. For added safety and integrity of the build the same variable is set in a multitude of files. Needless to say that these scripts include one another to make sure the source isn't tampered with. Sometimes the authors of Geant-4 are ironic. Then they e.g. add additional scripts with funny names, like e.g. one moc.gmk script. Notice how this reads backwards 'Come On!'[1]. The incautious user might feel delighted when he believes his ingenious (that's what he must think) attempts to thwart the Geant Security Scripts(TM) look just like if they worked after a new release, and then, just as he is running full of joy, the lace of variables and shell scripts pulls him back, reminding him that he may no roam freely, but shall only stay on the rich fields prepared for him by The Masters of Geant-4 Configure. Benjamin [1] Also cf. mock: Mock \Mock\, v. t. [imp. & p. p. {Mocked}; p. pr. & vb. n. {Mocking}.] [F. moquer, of uncertain origin; cf. OD. mocken to mumble, G. mucken, OSw. mucka.] [..] 3. To disappoint the hopes of; to deceive; to tantalize; as, to mock expectation. Thou hast mocked me, and told me lies. --Judg. xvi. 13. He will not . . . Mock us with his blest sight, then snatch him hence. --Milton. Syn: To deride; ridicule; taunt; jeer; tantalize; disappoint. See {Deride}.
Making dependency for file exampleN01.cc ... Making dependency for file src/ExN01PrimaryGeneratorAction.cc ... Making dependency for file src/ExN01PhysicsList.cc ... Making dependency for file src/ExN01DetectorConstruction.cc ... Compiling ExN01DetectorConstruction.cc ... Compiling ExN01PhysicsList.cc ... Compiling ExN01PrimaryGeneratorAction.cc ... Creating shared library /afs/f9.ijs.si/home/batic/geant4/tmp/Linux-g++/exampleN01/libexampleN01.so ... Compiling exampleN01.cc ... In file included from exampleN01.cc:35: /usr/include/geant/G4RunManager.hh: In member function ‘void G4RunManager::SetRandomNumberStoreDir(G4String)’: /usr/include/geant/G4RunManager.hh:352: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result Using granular libraries ... Linking exampleN01 ... /usr/lib64/geant4/libG4UIGAG.so: undefined reference to `typeinfo for G4VBasicShell' /usr/lib64/geant4/libG4UIGAG.so: undefined reference to `G4VBasicShell::G4VBasicShell()' /usr/lib64/geant4/libG4OpenInventor.so: undefined reference to `G4VInteractorManager::SecondaryLoop()' /usr/lib64/geant4/libG4OpenInventor.so: undefined reference to `G4VInteractorManager::RequireExitSecondaryLoop(int)' /usr/lib64/geant4/libG4UIGAG.so: undefined reference to `G4VBasicShell::~G4VBasicShell()' collect2: ld returned 1 exit status make: *** [/afs/f9.ijs.si/home/batic/geant4/bin/Linux-g++/exampleN01] Error 1 Please note also end of my first post: >Besides, there is a typo in geant-4.9.2-r1.ebuild; >line 172 is missing a slash and should be: >G4RADIOACTIVEDATA="${G4DATA}/$(basename ${WORKDIR}/RadioactiveDecay*)" Best, m
Hi Matej, I cannot confirm this on my machine. Did you use the patch I added above? I assume that it didn't hit the tree, yet. $ CPPVERBOSE=y make Making dependency for file exampleN01.cc ... Making dependency for file src/ExN01PrimaryGeneratorAction.cc ... Making dependency for file src/ExN01PhysicsList.cc ... Making dependency for file src/ExN01DetectorConstruction.cc ... g++ -W -Wall -ansi -pedantic -Wno-non-virtual-dtor -Wno-long-long -Wwrite-strings -Wpointer-arith -Woverloaded-virtual -pipe -O3 -march=prescott -mtune=prescott -pipe -mfpmath=sse -fPIC -DG4OPTIMISE -Iinclude -I/usr/include -DG4VERBOSE -DG4_STORE_TRAJECTORY -DG4UI_USE_TERMINAL -DG4UI_USE -DG4VIS_USE_DAWNFILE -DG4VIS_USE_HEPREPFILE -DG4VIS_USE_RAYTRACER -DG4VIS_USE_VRMLFILE -DG4VIS_USE_ASCIITREE -DG4VIS_USE_GAGTREE -DG4VIS_USE_OPENGLX -DG4VIS_USE_OPENGLXM -DG4VIS_USE_OPENGL -DG4VIS_USE_RAYTRACERX -DG4VIS_USE_VRML -DG4VIS_USE -I/include -I/usr/X11R6/include -I/usr/include/X11/extensions -I/usr/include/X11 -I/usr/include/geant -c -o /home/honk/geant4/tmp/Linux-g++/exampleN01/ExN01DetectorConstruction.o src/ExN01DetectorConstruction.cc g++ -W -Wall -ansi -pedantic -Wno-non-virtual-dtor -Wno-long-long -Wwrite-strings -Wpointer-arith -Woverloaded-virtual -pipe -O3 -march=prescott -mtune=prescott -pipe -mfpmath=sse -fPIC -DG4OPTIMISE -Iinclude -I/usr/include -DG4VERBOSE -DG4_STORE_TRAJECTORY -DG4UI_USE_TERMINAL -DG4UI_USE -DG4VIS_USE_DAWNFILE -DG4VIS_USE_HEPREPFILE -DG4VIS_USE_RAYTRACER -DG4VIS_USE_VRMLFILE -DG4VIS_USE_ASCIITREE -DG4VIS_USE_GAGTREE -DG4VIS_USE_OPENGLX -DG4VIS_USE_OPENGLXM -DG4VIS_USE_OPENGL -DG4VIS_USE_RAYTRACERX -DG4VIS_USE_VRML -DG4VIS_USE -I/include -I/usr/X11R6/include -I/usr/include/X11/extensions -I/usr/include/X11 -I/usr/include/geant -c -o /home/honk/geant4/tmp/Linux-g++/exampleN01/ExN01PhysicsList.o src/ExN01PhysicsList.cc g++ -W -Wall -ansi -pedantic -Wno-non-virtual-dtor -Wno-long-long -Wwrite-strings -Wpointer-arith -Woverloaded-virtual -pipe -O3 -march=prescott -mtune=prescott -pipe -mfpmath=sse -fPIC -DG4OPTIMISE -Iinclude -I/usr/include -DG4VERBOSE -DG4_STORE_TRAJECTORY -DG4UI_USE_TERMINAL -DG4UI_USE -DG4VIS_USE_DAWNFILE -DG4VIS_USE_HEPREPFILE -DG4VIS_USE_RAYTRACER -DG4VIS_USE_VRMLFILE -DG4VIS_USE_ASCIITREE -DG4VIS_USE_GAGTREE -DG4VIS_USE_OPENGLX -DG4VIS_USE_OPENGLXM -DG4VIS_USE_OPENGL -DG4VIS_USE_RAYTRACERX -DG4VIS_USE_VRML -DG4VIS_USE -I/include -I/usr/X11R6/include -I/usr/include/X11/extensions -I/usr/include/X11 -I/usr/include/geant -c -o /home/honk/geant4/tmp/Linux-g++/exampleN01/ExN01PrimaryGeneratorAction.o src/ExN01PrimaryGeneratorAction.cc Creating shared library /home/honk/geant4/tmp/Linux-g++/exampleN01/libexampleN01.so ... g++ -W -Wall -ansi -pedantic -Wno-non-virtual-dtor -Wno-long-long -Wwrite-strings -Wpointer-arith -Woverloaded-virtual -pipe -O3 -march=prescott -mtune=prescott -pipe -mfpmath=sse -fPIC -DG4OPTIMISE -Iinclude -I/usr/include -DG4VERBOSE -DG4_STORE_TRAJECTORY -DG4UI_USE_TERMINAL -DG4UI_USE -DG4VIS_USE_DAWNFILE -DG4VIS_USE_HEPREPFILE -DG4VIS_USE_RAYTRACER -DG4VIS_USE_VRMLFILE -DG4VIS_USE_ASCIITREE -DG4VIS_USE_GAGTREE -DG4VIS_USE_OPENGLX -DG4VIS_USE_OPENGLXM -DG4VIS_USE_OPENGL -DG4VIS_USE_RAYTRACERX -DG4VIS_USE_VRML -DG4VIS_USE -I/include -I/usr/X11R6/include -I/usr/include/X11/extensions -I/usr/include/X11 -I/usr/include/geant \ -c -o /home/honk/geant4/tmp/Linux-g++/exampleN01/exe/exampleN01.o exampleN01.cc Using granular libraries ... g++ -W -Wall -ansi -pedantic -Wno-non-virtual-dtor -Wno-long-long -Wwrite-strings -Wpointer-arith -Woverloaded-virtual -pipe -O3 -march=prescott -mtune=prescott -pipe -mfpmath=sse -fPIC -DG4OPTIMISE -Iinclude -I/usr/include -DG4VERBOSE -DG4_STORE_TRAJECTORY -DG4UI_USE_TERMINAL -DG4UI_USE -DG4VIS_USE_DAWNFILE -DG4VIS_USE_HEPREPFILE -DG4VIS_USE_RAYTRACER -DG4VIS_USE_VRMLFILE -DG4VIS_USE_ASCIITREE -DG4VIS_USE_GAGTREE -DG4VIS_USE_OPENGLX -DG4VIS_USE_OPENGLXM -DG4VIS_USE_OPENGL -DG4VIS_USE_RAYTRACERX -DG4VIS_USE_VRML -DG4VIS_USE -I/include -I/usr/X11R6/include -I/usr/include/X11/extensions -I/usr/include/X11 -I/usr/include/geant \ -o /home/honk/geant4/bin/Linux-g++/exampleN01 /home/honk/geant4/tmp/Linux-g++/exampleN01/exe/exampleN01.o -L/usr/lib -L/usr/lib/geant4 -L/home/honk/geant4/tmp/Linux-g++/exampleN01 -Wl,-rpath /home/honk/geant4/tmp/Linux-g++/exampleN01 \ -lexampleN01 -lG4error_propagation -lG4mctruth -lG4readout -lG4phys_lists -lG4gflash -lG4phys_builders -lG4visHepRep -lG4biasing -lG4geomtext -lG4FR -lG4brep -lG4OpenGL -lG4RayTracer -lG4Tree -lG4VRML -lG4visXXX -lG4vis_management -lG4hadronic_radioactivedecay -lG4decay -lG4UIbasic -lG4UIGAG -lG4UIcommon -lG4emhighenergy -lG4geomBoolean -lG4partadj -lG4muons -lG4empolar -lG4emlowenergy -lG4hadronic_coherent_elastic -lG4xrays -lG4hadronic_binary -lG4partutils -lG4emstandard -lG4had_theo_max -lG4had_muon_nuclear -lG4run -lG4hadronic_interface_ci -lG4hadronic_abrasion -lG4scoring -lG4hadronic_bert_cascade -lG4hadronic_hetcpp_evaporation -lG4hadronic_proc -lG4hadronic_em_dissociation -lG4hadronic_stop -lG4hadronic_hetcpp_utils -lG4hadronic_mgt -lG4hadronic_qmd -lG4hadronic_ablation -lG4hadronic_iso -lG4optical -lG4had_preequ_exciton -lG4hadronic_incl_cascade -lG4parameterisation -lG4had_lll_fis -lG4hadronic_deex_handler -lG4had_neu_hp -lG4had_string_diff -lG4hadronic_leading_particle -lG4hadronic_deex_evaporation -lG4hadronic_deex_gem_evaporation -lG4hadronic_deex_fission -lG4detutils -lG4hadronic_deex_photon_evaporation -lG4hadronic_deex_fermi_breakup -lG4had_string_frag -lG4hadronic_HE -lG4geomdivision -lG4hadronic_qgstring -lG4had_string_man -lG4had_im_r_matrix -lG4hadronic_deex_management -lG4hadronic_LE -lG4hadronic_body_ci -lG4hadronic_RPG -lG4hadronic_deex_util -lG4shortlived -lG4hadronic_xsect -lG4hadronic_deex_multifragmentation -lG4had_mod_util -lG4detscorer -lG4had_mod_man -lG4hadronic_util -lG4transportation -lG4modeling -lG4mesons -lG4event -lG4geombias -lG4tracking -lG4emutils -lG4ions -lG4baryons -lG4leptons -lG4bosons -lG4cuts -lG4detector -lG4specsolids -lG4digits -lG4hits -lG4csg -lG4hepnumerics -lG4navigation -lG4volumes -lG4procman -lG4track -lG4magneticfield -lG4partman -lG4geometrymng -lG4materials -lG4graphics_reps -lG4intercoms -lG4globman -L/lib -lGLU -lGL -lXm -lXpm -L/usr/X11R6/lib -lXmu -lXt -lXext -lX11 -lSM -lICE -lCLHEP -lm -lz I am attaching another path for the slash issue. Cheers, Benjamin
Created attachment 183372 [details, diff] Add forgotten slash in path
Thanks Ben and Matej, I've just commited a patched ebuild in the tree. Hopefully the problem is gone. Leaving this bug open until confirmation.
Sorry, haven't tried with the patches, yet. Will let you know immediately when I do. Best and thanks, M
Nope. Even building with new patches doesn't help. Still libQtCore is not found, hence libraries that need qt are not build, eventhough qt is among dependencies... Will add additional info later. Have to run. Bye, M
Well, as I said, for me the patch doesn't solve the problem. I have searched around and found one possible problem: Linux-g++.gmk searches for libqtcore here: 100: QT_SEARCH_LIB1 := $(shell ls $(QTHOME)/lib/qt$(QT_VERSION)/libq* 2>/dev/null | wc -l ) 101: QT_SEARCH_LIB2 := $(shell ls $(QTHOME)/lib/libq* 2>/dev/null | wc -l ) Now qt4 has named the libraries like libQt* and not libqt*, so it doesn't find anything here and so doesn't (I suppose) set the libs to /usr/lib/qt4 and flags to -L/usr/lib/qt4 -lQtCore -lQtGui ... If that is (would be) the case, I have patched ebuild adding -e "s/libq\*/libq\* \$\(QTHOME\)\/lib\/qt\$\(QT_VERSION\)\/libQ\*/g" \ to sed in Linux*gmk But then I found another thing: /var/tmp/portage/sci-physics/geant-4.9.2-r3/temp/environment file, which has: grep -i qt environment DEPEND=$'>=sci-physics/clhep-2.0.4.2\n\tmotif? ( x11-libs/openmotif )\n\tathena? ( x11-libs/libXaw )\n\tqt4? ( || ( x11-libs/qt:4 x11-libs/qt-gui ) )\n\topeninventor? ( >=media-libs/openinventor-2.1.5.10-r3 )\n\traytracerx? ( x11-libs/libX11 x11-libs/libXmu )\n\topengl? ( virtual/opengl\n\t\t\t athena? ( x11-libs/Xaw3d )\n\t\t\t qt4? ( || ( x11-libs/qt:4[opengl] x11-libs/qt-opengl ) ) )\n\tgdml? ( dev-libs/xerces-c )\n\tgeant3? ( sci-physics/geant:3 )\n\tdawn? ( media-gfx/dawn )\n\tzlib? ( sys-libs/zlib ) =sys-devel/automake-1.10*\n\t>=sys-devel/autoconf-2.61 sys-devel/libtool' IUSE=$'athena +data dawn debug examples gdml geant3 global minimal +motif\n\t+opengl openinventor qt4 +raytracerx static +vrml zlib debug' MULTILIB_STRICT_DIRS='/lib32 /lib /usr/lib32 /usr/lib /usr/kde/*/lib32 /usr/kde/*/lib /usr/qt/*/lib32 /usr/qt/*/lib /usr/X11R6/lib32 /usr/X11R6/lib' PKG_CONFIG_PATH=/usr/qt/3/lib64/pkgconfig QTDIR=/usr/qt/3 RDEPEND=$'>=sci-physics/clhep-2.0.4.2\n\tmotif? ( x11-libs/openmotif )\n\tathena? ( x11-libs/libXaw )\n\tqt4? ( || ( x11-libs/qt:4 x11-libs/qt-gui ) )\n\topeninventor? ( >=media-libs/openinventor-2.1.5.10-r3 )\n\traytracerx? ( x11-libs/libX11 x11-libs/libXmu )\n\topengl? ( virtual/opengl\n\t\t\t athena? ( x11-libs/Xaw3d )\n\t\t\t qt4? ( || (x11-libs/qt:4[opengl] x11-libs/qt-opengl ) ) )\n\tgdml? ( dev-libs/xerces-c )\n\tgeant3? ( sci-physics/geant:3 )\n\tdawn? ( media-gfx/dawn )\n\tzlib? ( sys-libs/zlib ) ' USE='amd64 athena data dawn elibc_glibc gdml geant3 kernel_linux motif multilib opengl openinventor qt4 raytracerx userland_GNU vrml zlib' type="KDE;Qt" use qt4 && export G4UI_BUILD_QT_SESSION=y; sed -i -e "/CXXFLAGS[[:space:]]*.=[[:space:]]-O2/s:=.*:= ${CXXFLAGS}:" -e "/FCFLAGS[[:space:]]*.=[[:space:]]-O2/s:=.*:= ${FFLAGS:--O2}:" -e "/CCFLAGS[[:space:]]*.=[[:space:]]-O2/s:=.*:= ${CFLAGS}:" -e "s:-Wl,-soname:${LDFLAGS} -Wl,-soname:g" -e "s/libq\*/libq\* \$\(QTHOME\)\/lib\/qt\$\(QT_VERSION\)\/libQ\*/g" config/sys/Linux*gmk || die "flag substitution failed"; declare -x MULTILIB_STRICT_DIRS="/lib32 /lib /usr/lib32 /usr/lib /usr/kde/*/lib32 /usr/kde/*/lib /usr/qt/*/lib32 /usr/qt/*/lib /usr/X11R6/lib32 /usr/X11R6/lib" declare -x PKG_CONFIG_PATH="/usr/qt/3/lib64/pkgconfig" declare -x QTDIR="/usr/qt/3" declare -x USE="amd64 athena data dawn elibc_glibc gdml geant3 kernel_linux motif multilib opengl openinventor qt4 raytracerx userland_GNU vrml zlib" So it seems to me that for some (or other) reason, my qt homedir is set to /usr/qt/3 (instead of just /usr). Now if this is the case, no wonders that libQtCore is not found, but I have no idea why (and where) this is set. Hope this helps. Btw, examples still don't comppile, the error message is still the same. And some (granular) libs are still not built. Best, m
Actually, it ebuild compile-d with adding -e "s/libq\*/lib\[q,Q\]t\*/g" \ to sed in Linux*gmk Now I am waiting for install to see if everything is ok.
Yes, indeed, now examples N01 and N02 compile (and work). I have added the patch. Best, m
Created attachment 183870 [details, diff] patch for r2 to search for qt libs properly diff -u -r /usr/portage/sci-physics/geant/geant-4.9.2-r2.ebuild /d0/nfs/gentoo/portage.local/sci-physics/geant/geant-4.9.2-r3.ebuild
I've just committed fixes for the qt linking (still geant-4.9.2-r2). The attached patch above did fix linking, but on qt3, so I did not use it since we link on qt4 only. Anyway thanks all, closing this one, reopen if you still see the same problems after resync and remerge.
After living happily with locally changed ebuild (using my patch above), our sysadmin sync-ed and rebuild world. Including geant4. And I am sad again. For our system (with both qt3 and qt4 installed), the new ebuild sci-physics/geant-4.9.2_p01, doesn't work, with the same symptoms as described in this bug. Best, Matej
Hi, The problem I see now (expecting the Linux-g++.gmk) is on lines 99-101: Notice that the searched libpath again is with a small letters (libq*) ifndef QTLIBPATH QT_SEARCH_LIB1 := $(shell ls $(QTHOME)/lib/qt$(QT_VERSION)/libq* 2>/dev/null | wc -l ) QT_SEARCH_LIB2 := $(shell ls $(QTHOME)/lib/libq* 2>/dev/null | wc -l ) ifneq ($(QT_SEARCH_LIB1),0) QTLIBPATH := /lib/qt$(QT_VERSION) endif ifneq ($(QT_SEARCH_LIB2),0) QTLIBPATH := /lib endif endif -- Regards, Dmitry
So, I have modified a /usr/share/geant4/config/sys/Linux-g++.gmk (even without recompiling a GEANT) and it works for me now.
Please someone change the ebuild, I would be glad to do that but I don't know how ...
That is precisely what my patch (geant4.patch above, https://bugs.gentoo.org/attachment.cgi?id=183870) did. I have no idea why it didn't make it to the current ebuild, (even after reading comment #17), since it solves the problem. Not with qt3, but with qt3 and qt4 both. Best, m (In reply to comment #21) > Please someone change the ebuild, > I would be glad to do that but I don't know how ... >
May be ebuild in src_configure() is missing: use gdml && export G4LIB_BUILD_GDML=y and somewhere (should add an use flag): export G4ANALYSIS_USE=y needed for the AIDA analysis Sorry if I'm wrong.
It should be fixed in the just committed 4.9.2_p02. Thanks all for your input.
