As requsted I am opening a new bug report for sci-chemistry/validation-6.2 for ~amd64. Sci-chemistry/validation-6.2 depends on sci-chemistry/pdb-extract-1.700 which is uncompilable on ~amd64. Reproducible: Always Steps to Reproduce: 1.Try to emerge sci-chemistry/validation-6.2 on ~amd64. 2. 3. Actual Results: Compilation of dependent package fails (reported as #246255). Expected Results: Emerge of the package with dependencies is succesfull. emerge --info Portage 2.1.6.3 (default/linux/amd64/2008.0/desktop, gcc-4.3.2, glibc-2.9_p20081201-r0, 2.6.28-gentoo x86_64) ================================================================= System uname: Linux-2.6.28-gentoo-x86_64-Intel-R-_Core-TM-2_Duo_CPU_E8200_@_2.66GHz-with-glibc2.2.5 Timestamp of tree: Sat, 27 Dec 2008 06:40:01 +0000 app-shells/bash: 3.2_p48 dev-java/java-config: 1.3.7-r1, 2.1.6-r1 dev-lang/python: 2.4.4-r15, 2.5.2-r8 dev-util/cmake: 2.6.2 sys-apps/baselayout: 2.0.0 sys-apps/openrc: 0.4.1 sys-apps/sandbox: 1.3.2 sys-devel/autoconf: 2.13, 2.63 sys-devel/automake: 1.4_p6, 1.5, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10.2 sys-devel/binutils: 2.19 sys-devel/gcc-config: 1.4.0-r4 sys-devel/libtool: 2.2.6a virtual/os-headers: 2.6.27-r2 ACCEPT_KEYWORDS="amd64 x86 ~amd64 ~x86" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-O2 -g -pipe -mtune=core2 -march=core2 -mssse3 -msse4.1" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/kde/4.1/env /usr/kde/4.1/share/config /usr/kde/4.1/shutdown /usr/share/config /var/bind" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/eselect/postgresql /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5/ext-active/ /etc/php/cgi-php5/ext-active/ /etc/php/cli-php5/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c /etc/udev/rules.d" CXXFLAGS="-O2 -g -pipe -mtune=core2 -march=core2 -mssse3 -msse4.1" DISTDIR="/usr/portage/distfiles" FEATURES="distlocks fixpackages nostrip parallel-fetch protect-owned sandbox sfperms strict unmerge-orphans userfetch" GENTOO_MIRRORS="http://gentoo.tiscali.nl/ http://gentoo.inode.at/ http://gentoo.lagis.at/ http://gentoo.mirror.web4u.cz/" LDFLAGS="-Wl,-O1" LINGUAS="cs en" MAKEOPTS="-j3" PKGDIR="/usr/portage/packages" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="X acl acpi alsa amd64 arts berkdb bluetooth branding bzip2 cairo cdr cli cracklib crypt cups dbus doc dri dvd dvdr dvdread eds emacs emboss encode esd evo examples fam fftw firefox fltk fortran gdbm gif gimp gmp gnome gpm gs gstreamer gtk hal htmlhandbook iconv idn isdnlog ithreads java jpeg kde kdeprefix lapack latex ldap libedit libnotify mad mbox midi mikmod mmx mp3 mpeg mudflap multilib nautilus ncurses nls nptl nptlonly nsplugin objc objc++ objc-gc ogg opengl openmp pam pch pcre pdf perl png ppds pppd python qt3 qt3support qt4 quicktime readline reflection samba sasl sdl session slang spell spl sse sse2 ssl startup-notification svg sysfs tcl tcpd threads tiff tk truetype unicode usb vorbis wxwindows xattr xcb xcomposite xemacs xinerama xml xorg xulrunner xv zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CAMERAS="sony_dscf1 sony_dscf55" ELIBC="glibc" INPUT_DEVICES="evdev keyboard mouse joystick" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="cs en" USERLAND="GNU" VIDEO_CARDS="fbdev glint intel mach64 mga neomagic nv radeon savage sis tdfx trident vesa vga via vmware voodoo nvidia v4l" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, INSTALL_MASK, LANG, LC_ALL, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, PORTDIR_OVERLAY
Well, then there is a reason why sci-chemistry/validation does not have the ~amd64 keyword. Assigning to maintainers.
I will take a look on this.
I took a look on the latest version and found several things: 1. Mutiple problems with gcc-4.3 (missing headers, usage of iostream.h, etc) 2. depends on libs which are outdated in cifparsobj as well as in pdb-extract. So the old libs must be build or validate must depend on the old version. As there are multiple open bugs which report incompatibilities of those versions with resend gccs this is no solution. 3. I don't really know the package, but it includes procheck which is in Donnies overlay (dberkholz-overlay). Perhaps this should be moved to the tree instead. Are there other functionalities which would be missing? ==> My vote: Close with wont fix or push upstream to fix the dependencies.
Gone from tree.
