root@grizzly:/root(8)# emerge -pvuDN world These are the packages that would be merged, in order: Calculating dependencies... done! emerge: there are no ebuilds to satisfy "java-virtuals/jaxb-virtual:1". (dependency required by "dev-java/dom4j-1.6.1-r3" [installed]) * IMPORTANT: 2 config files in '/etc' need updating. * See the CONFIGURATION FILES section of the emerge * man page to learn how to update config files. root@grizzly:/root(10)# qlist -I jaxb dev-java/jaxb dev-java/jaxb-tools dev-java/sun-jaxb-bin Reproducible: Always root@grizzly:/root(11)# emerge --info Portage 2.2_rc12 (default-linux/amd64/2007.0, gcc-4.3.2, glibc-2.8_p20080602-r0, 2.6.27 x86_64) ================================================================= System uname: Linux-2.6.27-x86_64-AMD_Athlon-tm-_64_Processor_3200+-with-glibc2.2.5 Timestamp of tree: Tue, 14 Oct 2008 02:04:01 +0000 distcc 2.18.3 x86_64-pc-linux-gnu (protocols 1 and 2) (default port 3632) [disabled] ccache version 2.4 [disabled] app-shells/bash: 3.2_p39 dev-java/java-config: 1.3.7, 2.1.6-r1 dev-lang/python: 2.4.4-r15, 2.5.2-r8 dev-python/pycrypto: 2.0.1-r6 dev-util/ccache: 2.4-r8 dev-util/cmake: 2.6.2 sys-apps/baselayout: 2.0.0 sys-apps/openrc: 0.3.0-r1 sys-apps/sandbox: 1.2.18.1-r3 sys-devel/autoconf: 2.13, 2.63 sys-devel/automake: 1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10.1-r1 sys-devel/binutils: 2.18-r3 sys-devel/gcc-config: 1.4.0-r4 sys-devel/libtool: 2.2.6a virtual/os-headers: 2.6.26 ACCEPT_KEYWORDS="amd64 ~amd64" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-O2 -march=k8" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/share/config /var/lib/hsqldb" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/ap ache2-php5/ext-active/ /etc/php/cgi-php5/ext-active/ /etc/php/cli-php5/ext-active/ /etc/revdep-rebuild /etc/terminfo /etc/texmf/web2c /etc/ udev/rules.d" CXXFLAGS="-O2 -march=k8" DISTDIR="/usr/portage/distfiles" FEATURES="distlocks fixpackages parallel-fetch preserve-libs protect-owned sandbox sfperms strict unmerge-orphans userfetch" FFLAGS="-O2 -march=k8" GENTOO_MIRRORS="http://linux.rz.ruhr-uni-bochum.de/download/gentoo-mirror http://ftp-stud.fht-esslingen.de/pub/Mirrors/gentoo/ rsync://ftp. fi.muni.cz/pub/linux/gentoo ftp://ftp.wh2.tu-dresden.de/pub/mirrors/gentoo ftp://sunsite.informatik.rwth-aachen.de/pub/Linux/gentoo ftp://f tp.tu-clausthal.de/pub/linux/gentoo ftp://ftp.easynet.nl/mirror/gentoo/ " LDFLAGS="" LINGUAS="de fr" MAKEOPTS="-j2" PKGDIR="/usr/portage/packages/All" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclu de=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/usr/local/portage/layman/science /usr/local/portage/layman/arcon /usr/local/portage/layman/sajinet /usr/local/portage/lay man/java-overlay /usr/local/portage" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="3dnow 3dnowext X Xaw3d a52 aac acl acpi administrator afs aiglx alsa amd64 amrr ao aotuv apache2 asf atlas auctex audacious audiofile automount bash-completion beagle berkdb bjam blas bluetooth bonobo boo boost bzip2 c++ cairo cdda cddb cdf cdio cdparanoia cdr cgi chm cli corba cracklib cran crypt cups curl cxx daap dbus device-mapper dga dia divx djvu dlloader dmi dri ds3490 dv dvb dvd dvdr dvi dxr3 dynagrap h eds effects elf emacs emboss encode epiphany esd evo examples exif expat extra fam fame ffmpeg fftw firefox fits flac fltk foomaticdb for tran fpx galago gd gdal gdbm geos gif gimp gimpprint ginac glade glitz gml gmp gnokii gnome gnuplot gnutls gphoto2 gpm graphics graphviz gs gsl gsm gstreamer gtk guile hal hardened hddtemp hdf hdf5 hlapi http iconv icq icu id3 imagemagick imap innodb ipv6 irda irmc isdnlog ithr eads jabber java jbig john jpeg jpeg2k kerberos kexi keyring ladspa lame lapack latex lcms ldap libffi libgda libsamplerate lirc lm_sensors lua lzo lzw mad maildir math matroska midi mmx mmxext mng mod mono motif mozdevelop mozilla mozsvg mozxmlterm mp3 mp4 mp4live mpeg mpeg2 m player mudflap musicbrainz mysql mysqli nautilus ncurses neXt netcdf netpbm network networkmanager nfs nls nntp nptl nptlonly nsplugin ntfs numarray numeric obex ocaml octave odbc ogdi ogg ole opengl openmp pae pam pcre pda pdf perl plotutils plugins png posix postgres postscri pt pppd preview-latex proj projectx pstricks python qhull quicktime readline reflection reiserfs rhythmbox rle rpc rrdcgi rrdtool samba sas l science sdl session slang slp sndfile snmp soup sox speex spell spl sqlite sse sse2 ssl stlport subtitles subversion suexec svg sysfs t1l ib tcl tcpd tex theora threads thunderbird tidy tiff tk truetype unicode userlocales utempter v4l2 vorbis wmf wxwindows xattr xemacs xext x ine xml xmlreader xmlrpc xorg xpm xulrunner xv xvid xvmc zlib zvbi" ALSA_CARDS="AC'97" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare d snoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACH E2_MODULES="actions alias auth_basic auth_digest authn_anon authn_dbd authn_dbm authn_default authn_file authz_dbm authz_default authz_grou pfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock dbd deflate dir disk_cache env expires ext_filter file_cache fi lter headers ident imagemap include info log_config logio mem_cache mime mime_magic negotiation proxy proxy_ajp proxy_balancer proxy_connec t proxy_http rewrite setenvif so speling status unique_id userdir usertrack vhost_alias" DVB_CARDS="tda10046 saa7134" ELIBC="glibc" INPUT_D EVICES="keyboard mouse " KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="de fr" LIRC_DEVICES="hauppauge_dvb" USERLAND="GNU" VIDEO_CARDS="radeon vesa fbdev" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_O PTS
Which java overlay(s) are you using?
rose@grizzly:/home/rose(2)$ layman -l * arcon [Subversion] (source: https://arcon.svn.sourcefo...) * java-overlay [Subversion] (source: http://overlays.gentoo.org...) * sajinet [Rsync ] (source: rsync://tapir.sajinet.com....) * science [Subversion] (source: http://overlays.gentoo.org...)
On a second computer with the same error I have: root@cheetah:/etc(61)# layman -l * java-overlay [Subversion] (source: http://overlays.gentoo.org...) * n4g [Subversion] (source: http://mars.arge.at/svn/n4...) * science [Subversion] (source: http://overlays.gentoo.org...) So I assume that, the java-overlay from http://overlays.gentoo.org... is responsible. At least it helps to perform a world update, if I delete this overlay.
Andrew: Can you depend on dom4j that's not been migrated to java-virtuals for now? I can move those to java-overlay or tree when the work is complete.
How can I mask packages from an overlay? I also use the javaoverlay and portage installed all packages with versions >= the portage-version. This error is caused bei dom4j eix dom4j [I] dev-java/dom4j Available versions: (1.4) (~)1.4-r1[1] (1) 1.6.1-r2 (~)1.6.1-r3 (~)1.6.1-r3[1] {doc elibc_FreeBSD source test} Installed versions: 1.6.1-r3(1)(06:22:14 06.10.2008)(-doc -elibc_FreeBSD -source -test) Homepage: http://dom4j.sourceforge.net/ Description: Java library for working with XML [1] "java-overlay" /usr/local/portage/layman/java-overlay but if I install the portage version, everything works fine
I revbumped and masked dom4j ebuild in java-overlay for now.
Should be fixed now. Feel free to reopen if something is still wrong.
Today I wanted to try the source version of icedtea6, available only in the java-overlay, and I encountered this issue. Steps to reproduce: 1. layman -a java-overlay 2. emerge icedtea6 Actual result: emerge: there are no ebuilds to satisfy "java-virtuals/jaxb-virtual:1". (dependency required by "dev-java/dom4j-1.6.1-r4" [ebuild]) (dependency required by "dev-java/jaxen-1.1.1" [ebuild]) (dependency required by "dev-java/xml-xmlbeans-1.0.4_pre20041217" [ebuild]) (dependency required by "dev-java/rhino-1.6.5" [ebuild]) (dependency required by "dev-java/icedtea6-1.4.1-r1" [ebuild]) (dependency required by "icedtea6" [argument]) Expected result: icedtea6 gets installed I tried to install jaxb-virtual manually but emerge doesn't find any ebuild to satisfy my request. I've never used before java-overlay, but at the moment I'm using gnome, mozilla and nouveau overlay. I also tried to install dev-java/jaxb and dev-java/jaxb-tools by hand, but they require gcc to be built with gcj USEflag, and so I aborted it. I think this bug should be reopened emerge --info: Portage 2.1.6.13 (default/linux/amd64/2008.0, gcc-4.3.3, glibc-2.9_p20081201-r2, 2.6.29-gentoo-r3 x86_64) ================================================================= System uname: Linux-2.6.29-gentoo-r3-x86_64-Intel-R-_Core-TM-2_Quad_CPU_Q9450_@_2.66GHz-with-gentoo-2.0.0 Timestamp of tree: Tue, 12 May 2009 19:45:01 +0000 app-shells/bash: 4.0_p17-r1 dev-java/java-config: 1.3.7-r1, 2.1.7 dev-lang/python: 2.4.4-r15, 2.5.4-r2, 2.6.2 dev-python/pycrypto: 2.0.1-r8 dev-util/cmake: 2.6.4 sys-apps/baselayout: 2.0.0 sys-apps/openrc: 0.4.3-r2 sys-apps/sandbox: 1.9 sys-devel/autoconf: 2.13, 2.63-r1 sys-devel/automake: 1.5, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10.2 sys-devel/binutils: 2.19.1-r1 sys-devel/gcc-config: 1.4.1 sys-devel/libtool: 2.2.6a virtual/os-headers: 2.6.29 ACCEPT_KEYWORDS="amd64 ~amd64" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=nocona -O2 -pipe -ggdb" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/share/config /var/lib/hsqldb" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5/ext-active/ /etc/php/cgi-php5/ext-active/ /etc/php/cli-php5/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/splash /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c /etc/udev/rules.d" CXXFLAGS="-march=nocona -O2 -pipe -ggdb" DISTDIR="/usr/portage/distfiles" FEATURES="distlocks fixpackages parallel-fetch protect-owned sandbox sfperms strict unmerge-orphans userfetch" GENTOO_MIRRORS=" ftp://ftp.unina.it/pub/linux/distributions/gentoo http://distfiles.gentoo.org/" LANG="it_IT.UTF-8" LC_ALL="it_IT.UTF-8" LDFLAGS="-s" LINGUAS="it" MAKEOPTS="-j5" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/usr/local/portage/layman/mozilla /usr/local/portage/layman/nouveau /usr/local/portage/layman/java-overlay /usr/local/portage" SYNC="rsync://rsync12.de.gentoo.org/gentoo-portage" USE="X aac acl acpi alsa amd64 apache2 apm avahi bash-completion bzip2 cairo cdr cli cracklib crypt css cups cvs cxx dbus dnd dri dvd dvdr encode examples exif ffmpeg firefox ftp gdbm geoip gif gimp gnome gnome-keyring gpm graphviz gstreamer gtk hal iconv id3tag ieee1394 imagemagick imap ipod isdnlog jabber jack java javascript jingle jpeg jpeg2k kvm lame libnotify libwww lm_sensors mad midi mime mmx mozilla mp3 mpeg msn mtp mudflap multilib mysql mysqli nautilus ncurses nforce2 nls nptl nptlonly nvidia ogg opengl openmp pam pango pcre pdf perl php pmu png posix pppd python qt4 readline reflection rss session simplexml spell spl sqlite sqlite3 sse sse2 sse3 sse4_1 ssl subversion svg sysfs tagwriting tcpd theora threads truetype unicode usb v4l v4l2 vcd vnc vorbis webkit wxwindows x264 xcomposite xinerama xml xorg xulrunner xvid xvmc zlib" ALSA_CARDS="hda-intel" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="alias authz_host dav davfs dav_lock dir headers include mime mime_magic rewrite" ELIBC="glibc" INPUT_DEVICES="evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="it" USERLAND="GNU" VIDEO_CARDS="nouveau nvidia nv v4l" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, INSTALL_MASK, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
(In reply to comment #8) > > I think this bug should be reopened > I moved jaxb-virtual to java overlay. Will test later if it actually fixes this.
Yes, it works. emerge doesn't complain about missing dependencies and I don't have to install GCC with gcj USE flag, but it still stops because of an error, unrelated to jaxb-virtuals. I've already reported it: #269943
