I am using ~amd64 up to date as of this morning. I hit a failure with gchemutils on the autoconf step. The latest installed autoconf is sys-devel/autoconf-2.62. ***** autoconf ***** ***** autoconf configure.ac:266: error: possibly undefined macro: AM_GCONF_SOURCE_2 If this token and others are legitimate, please use m4_pattern_allow. See the Autoconf documentation.
Ok, I'm not seeing any problem on a stable x86 gnome-light box with autoconf-2.61-r1. I'll check on the ~x86 box later when I've got it clean enough to break...
I'm not seeing it either. ebuild gets through src_unpack() with no trouble. Emerging the package now fails at openbabel though...(I'll open another bug if you want... personally I'm sick of 'em :) config.status: creating src/config.h config.status: executing depfiles commands config.status: executing libtool commands config.status: executing include/openbabel/babelconfig.h commands Makefile:162: *** missing separator. Stop. * * ERROR: sci-chemistry/openbabel-2.2.0_beta5 failed. # emerge --info Portage 2.1.5.4 (default-linux/amd64/2007.0/desktop, gcc-4.3.1, glibc-2.8_p20080602-r0, 2.6.25-gentoo-r4 x86_64) ================================================================= System uname: 2.6.25-gentoo-r4 x86_64 Intel(R) Core(TM)2 CPU 6700 @ 2.66GHz Timestamp of tree: Mon, 09 Jun 2008 07:45:01 +0000 app-shells/bash: 3.2_p39 dev-java/java-config: 1.3.7, 2.1.6 dev-lang/python: 2.4.4-r5, 2.5.2-r4 dev-python/pycrypto: 2.0.1-r6 sys-apps/baselayout: 2.0.0 sys-apps/openrc: 0.2.5 sys-apps/sandbox: 1.2.18.1-r2 sys-devel/autoconf: 2.13, 2.62 sys-devel/automake: 1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10.1-r1 sys-devel/binutils: 2.18-r1 sys-devel/gcc-config: 1.4.0-r4 sys-devel/libtool: 1.5.26 virtual/os-headers: 2.6.25-r3 ACCEPT_KEYWORDS="amd64 ~amd64" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=core2 -mtune=core2 -O2 -pipe -fomit-frame-pointer" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/kde/4.0/env /usr/kde/4.0/share/config /usr/kde/4.0/shutdown /usr/share/config /var/lib/hsqldb" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/terminfo /etc/texmf/web2c /etc/udev/rules.d" CXXFLAGS="-march=core2 -mtune=core2 -O2 -pipe -fomit-frame-pointer" DISTDIR="/usr/portage/distfiles" FEATURES="cvs digest distlocks multilib-strict parallel-fetch sandbox sfperms strict unmerge-orphans userfetch" GENTOO_MIRRORS="ftp://mirror.iawnet.sandia.gov/pub/gentoo http://distfiles.gentoo.org http://www.ibiblio.org/pub/Linux/distributions/gentoo" LDFLAGS="" LINGUAS="en en_US" MAKEOPTS="-j3" PKGDIR="/usr/portage/packages" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/usr/portage/local/layman/je_fro /usr/portage/local/layman/science" SYNC="rsync://rsync.namerica.gentoo.org/gentoo-portage" USE="X a52 aac acpi alsa amd64 async automount bash-completion bitmap-fonts blas branding bzip2 cairo cdio cdr chardet cli cracklib crypt cscope cups dbus directfb dlloader dri dts dvd dvdnav dvdr dvdread emboss encode exif fam fbcon ffmpeg fftw firefox flac fontconfig foomaticdb fortran fortran95 gdbm gif glibc-omitfp gnutls gphoto2 gpm gs gstreamer gtk h323 hal hdf iconv ieee1394 ifc imagemagick int64 isdnlog ithreads java jce jfs joystick jpeg jpeg2k kde kdehiddenvisibility libwww logitech-mouse logrotate mad maildir matroska midi mikmod mjpeg mmap mmx mng modplug motif mp2 mp3 mp4 mpeg mpi mplayer mudflap musepack musicbrainz mysql ncurses netcdf network newspr nls no-old-linux no_wxgtk1 noamazon nosendmail nptl nptlonly nsplugin nvidia nvtv offensive ogg openbabel opengl openmp pam pcre pdf perl pertty plotutils png postfix ppds pppd python qt3 qt3support qt4 quicktime rar readline reflection reiserfs roe rtc ruby samba sdl session smp snmp spell spl sse sse2 ssl ssse3 startup-notification subtitles subversion svg syslog tcl tcpd theora threads tiff tk transcode truetype truetype-fonts type1-fonts udev unicode usb v4l v4l2 vcd vim-with-x visualization vorbis wavpack webdav wma wmf x264 xchattext xfs xgetdefault xinetd xml xmpi xorg xpm xprint xscreensaver xv xvid xvmc zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" ELIBC="glibc" INPUT_DEVICES="evdev joystick keyboard mouse vmmouse wacom" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="en en_US" USERLAND="GNU" VIDEO_CARDS="fbdev nv nvidia v4l v4l2 vesa vga vmware" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
May be I am hitting a local issue? I thought I had committed the fix for the OpenBabel issue - it is committed upstream. My commit must not have gone through for some reason. I will fix it. I will also look into why this is only hitting me - I am just running a fairly vanilla x86_64 on ~amd64.
Ok, having removed gnome, switched to XFCE4, and trying to re-install gchemutils, I'm hitting the same issue Marcus did. Is the AM_GCONF_SOURCE_2 token provided by gconf by any chance?
Created attachment 163587 [details, diff] gchemutils.ebuild.patch Having spoke to Jean Brefort it seems that this is related to building gchemutils on a non-gnome system. I have done up a revised ebuild which works correctly on non-gnome systems. The patch for the ebuild is attached.
Fixed in CVS, thanks!
