Gentoo Websites Logo
Go to: Gentoo Home Documentation Forums Lists Bugs Planet Store Wiki Get Gentoo!
Bug 220907 - sci-chemistry/aria NEW ebuild
Summary: sci-chemistry/aria NEW ebuild
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: New packages (show other bugs)
Hardware: All All
: Normal enhancement
Assignee: Default Assignee for New Packages
URL:
Whiteboard:
Keywords: EBUILD, InVCS
Depends on: 210617 220733 220905
Blocks:
  Show dependency tree
 
Reported: 2008-05-08 11:52 UTC by Justin Lecher (RETIRED)
Modified: 2010-02-06 21:28 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
aria-2.2.ebuild (aria-2.2.ebuild,1.88 KB, text/plain)
2008-05-08 11:53 UTC, Justin Lecher (RETIRED)
Details
sa_ls_cool2.patch (sa_ls_cool2.patch,388 bytes, text/plain)
2008-05-08 11:53 UTC, Justin Lecher (RETIRED)
Details
aria-2.2.ebuild (aria-2.2.ebuild,1.88 KB, text/plain)
2008-05-13 10:08 UTC, Justin Lecher (RETIRED)
Details

Note You need to log in before you can comment on or make changes to this bug.
Description Justin Lecher (RETIRED) gentoo-dev 2008-05-08 11:52:41 UTC
This ebuild installs aria.

QUOTE
Our computer program ARIA (Ambiguous Restraints for Iterative Assignment) is a software for automated NOE assignment and NMR structure calculation. It speeds up and automatizes the assignment process through the use of an iterative structure calculation scheme. Additionally, a refinement in explicit water improves the  quality of the calculated structures, validation tests help spectroscopists to judge the quality of the final structures, and the support of the CCPN data model simplifies the exchange of information with other NMR software packages.
\QUOTE

It is manly an interface to speed up several things in NMR structure calculation tasks.

It is on a python code base.
Comment 1 Justin Lecher (RETIRED) gentoo-dev 2008-05-08 11:53:25 UTC
Created attachment 152463 [details]
aria-2.2.ebuild
Comment 2 Justin Lecher (RETIRED) gentoo-dev 2008-05-08 11:53:46 UTC
Created attachment 152465 [details]
sa_ls_cool2.patch
Comment 3 Justin Lecher (RETIRED) gentoo-dev 2008-05-13 10:08:25 UTC
Created attachment 153029 [details]
aria-2.2.ebuild

Typo corrected;
src_test fixed;
Comment 4 Donnie Berkholz (RETIRED) gentoo-dev 2008-08-05 17:51:56 UTC
As per https://bugs.gentoo.org/show_bug.cgi?id=220905#c7 -- upstream issues with changing sources, so WONTFIX.
Comment 5 Justin Lecher (RETIRED) gentoo-dev 2010-02-06 21:27:28 UTC
I will add it
Comment 6 Justin Lecher (RETIRED) gentoo-dev 2010-02-06 21:28:19 UTC
Commited