hi, emerge gcc (its a live ebuild from dirtyepic overlay) fails with this error: >>> Completed installing gcc-4.3.1_pre20080506 into /var/tmp/portage/sys-devel/gcc-4.3.1_pre20080506/image/ ecompressdir: bzip2 -9 /usr/share/gcc-data/i686-pc-linux-gnu/4.3.1-pre20080506/man ecompressdir: bzip2 -9 /usr/share/gcc-data/i686-pc-linux-gnu/4.3.1-pre20080506/info injecting /usr/lib/gcc/i686-pc-linux-gnu/4.3.1-pre20080410/libstdc++.so.6 into /var/tmp/portage/sys-devel/gcc-4.3.1_pre20080506/image/ Traceback (most recent call last): File "/usr/bin/emerge", line 18, in <module> retval = _emerge.emerge_main() File "/usr/lib/portage/pym/_emerge/__init__.py", line 8786, in emerge_main myopts, myaction, myfiles, spinner) File "/usr/lib/portage/pym/_emerge/__init__.py", line 8149, in action_build retval = mergetask.merge(pkglist, favorites, mtimedb) File "/usr/lib/portage/pym/_emerge/__init__.py", line 5360, in merge return self._merge(mylist, favorites, mtimedb) File "/usr/lib/portage/pym/_emerge/__init__.py", line 5677, in _merge vartree=vartree, prev_mtimes=ldpath_mtimes) File "/usr/lib/portage/pym/portage/__init__.py", line 5324, in merge mydbapi=mydbapi, prev_mtimes=prev_mtimes) File "/usr/lib/portage/pym/portage/dbapi/vartree.py", line 2634, in merge mydbapi=mydbapi, prev_mtimes=prev_mtimes) File "/usr/lib/portage/pym/portage/dbapi/vartree.py", line 2642, in _merge cleanup=cleanup, mydbapi=mydbapi, prev_mtimes=prev_mtimes) File "/usr/lib/portage/pym/portage/dbapi/vartree.py", line 2056, in treewalk self._preserve_libs(srcroot, destroot, myfilelist+mylinklist, counter, inforoot) File "/usr/lib/portage/pym/portage/dbapi/vartree.py", line 1731, in _preserve_libs for x in candidates: RuntimeError: Set changed size during iteration Reproducible: Always Steps to Reproduce: emerge gcc Portage 2.2_pre6 (default/linux/x86/2008.0/desktop, gcc-4.2.3, glibc-2.7-r2, 2.6.25-zen1-07742-gb1b47da i686) ================================================================= System uname: 2.6.25-zen1-07742-gb1b47da i686 Intel(R) Core(TM)2 Duo CPU T7500 @ 2.20GHz Timestamp of tree: Tue, 06 May 2008 18:35:01 +0000 app-shells/bash: 3.2_p39 dev-java/java-config: 1.3.7, 2.1.6 dev-lang/python: 2.5.2-r2 dev-python/pycrypto: 2.0.1-r6 sys-apps/baselayout: 2.0.0 sys-apps/openrc: 9999 sys-apps/sandbox: 1.2.18.1-r2 sys-devel/autoconf: 2.13, 2.62 sys-devel/automake: 1.5, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10.1-r1 sys-devel/binutils: 2.18.50.0.6 sys-devel/gcc-config: 1.4.0-r4 sys-devel/libtool: 2.2.4 virtual/os-headers: 2.6.25-r1 ACCEPT_KEYWORDS="x86 ~x86" CBUILD="i686-pc-linux-gnu" CFLAGS="-O2 -march=native -pipe -fomit-frame-pointer" CHOST="i686-pc-linux-gnu" CONFIG_PROTECT="/etc" CONFIG_PROTECT_MASK="/etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/splash /etc/terminfo /etc/udev/rules.d" CXXFLAGS="-O2 -march=native -pipe -fomit-frame-pointer" DISTDIR="/usr/portage/distfiles" EMERGE_DEFAULT_OPTS="--with-bdeps=y" FEATURES="distlocks keeptemp keepwork parallel-fetch preserve-libs sfperms strict unmerge-orphans userfetch" GENTOO_MIRRORS="ftp://ftp.unina.it/pub/linux/distributions/gentoo http://gentoo.inode.at/ http://gentoo.modulix.net/gentoo/" LANG="it_IT.UTF-8" LC_ALL="it_IT.UTF-8" LDFLAGS="" MAKEOPTS="-j9" PKGDIR="/usr/portage/packages" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/usr/portage/local/layman/dirtyepic /usr/portage/local/layman/dottout /usr/portage/local/layman/sunrise /usr/local/portage /usr/portage/local/layman/gentoo-soor-overlay /usr/portage/local/layman/minefield" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="X aac acl acpi alsa berkdb bluetooth branding bzip2 cairo cddb cdr cli cracklib crypt curl dbus directfb dri dvb dvd dvdnav dvdr dvdread eds emboss encode esd evo fam fbcon fbcondecor firefox flac fortran gdbm gif glitz gpm gstreamer gtk hal i810 iconv isdnlog jpeg kerberos ldap libnotify lm_sensors mad midi mikmod mmx mp2 mp3 mpeg msn mudflap musepack ncurses newspr nls normalize nptl nptlonly nsplugin ogg opengl openmp pam pcre pdf perl plugins png ppds pppd python qt3support quicktime rar readline real reflection rss sdl sensors session spell spl sse sse2 ssl ssse3 startup-notification svg svga tcpd threads tiff truetype ubuntu unicode usb v4l v4l2 vesa vorbis wifi win32codecs wma x264 x86 xcomposite xml xorg xv xvid xvmc zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1 emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" ELIBC="glibc" INPUT_DEVICES="mouse keyboard" KERNEL="linux" LCD_DEVICES="cfontz" USERLAND="GNU" VIDEO_CARDS="i810" Unset: CPPFLAGS, CTARGET, INSTALL_MASK, LINGUAS, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Created attachment 152171 [details, diff] fix the 'Set changed size during iteration' error I think this patch might fix it but I haven't tested it.
thank you, it works
ok, probably something went wrong. after emerge gcc, now emerge 'whatever' fails: Traceback (most recent call last): File "/usr/bin/emerge", line 18, in <module> retval = _emerge.emerge_main() File "/usr/lib/portage/pym/_emerge/__init__.py", line 8786, in emerge_main myopts, myaction, myfiles, spinner) File "/usr/lib/portage/pym/_emerge/__init__.py", line 8149, in action_build retval = mergetask.merge(pkglist, favorites, mtimedb) File "/usr/lib/portage/pym/_emerge/__init__.py", line 5360, in merge return self._merge(mylist, favorites, mtimedb) File "/usr/lib/portage/pym/_emerge/__init__.py", line 5677, in _merge vartree=vartree, prev_mtimes=ldpath_mtimes) File "/usr/lib/portage/pym/portage/__init__.py", line 5324, in merge mydbapi=mydbapi, prev_mtimes=prev_mtimes) File "/usr/lib/portage/pym/portage/dbapi/vartree.py", line 2637, in merge mydbapi=mydbapi, prev_mtimes=prev_mtimes) File "/usr/lib/portage/pym/portage/dbapi/vartree.py", line 2645, in _merge cleanup=cleanup, mydbapi=mydbapi, prev_mtimes=prev_mtimes) File "/usr/lib/portage/pym/portage/dbapi/vartree.py", line 2268, in treewalk others_in_slot=others_in_slot) File "/usr/lib/portage/pym/portage/dbapi/vartree.py", line 1278, in unmerge if not self.vartree.dbapi.linkmap.findConsumers(f): File "/usr/lib/portage/pym/portage/dbapi/vartree.py", line 218, in findConsumers raise KeyError("%s not in object list" % obj) KeyError: '/usr/lib/gcc/i686-pc-linux-gnu/4.3.1-pre20080410/libstdc++.so.6.0.10 not in object list' probably its not related to the patch..
*bump* without your patch emerge gcc fails with portage-2.2_pre7 too
(In reply to comment #1) > Created an attachment (id=152171) [edit] > fix the 'Set changed size during iteration' error This is in svn r10388.
Uhmm I had the same error as comment #0 in portage-2.2_pre7 while updating dev-libs/libgcrypt-1.2.4 to 1.4.0-r1, applying the patch here fixed it, but every subsequent emerge fails with that KeyError, so I suppose its related to the patch in comment #1... Is there any patch to fix the KeyError too? Best regards, chtekk.
That KeyError from comment #3 looks almost identical to the one in bug #223591, comment #4.
(In reply to comment #7) > That KeyError from comment #3 looks almost identical to the one in bug #223591, > comment #4. Indeed it does, but the suggested fix in that bug didn't work (remove all NEEDED.ELF.2 files and regen them with the code from the portage-2.2_pre7-r1.ebuild), I actually did that and I still get the following error right after it finishes merging the package (portage itself in this case): Traceback (most recent call last): File "/usr/bin/emerge", line 18, in <module> retval = _emerge.emerge_main() File "/usr/lib64/portage/pym/_emerge/__init__.py", line 9044, in emerge_main myopts, myaction, myfiles, spinner) File "/usr/lib64/portage/pym/_emerge/__init__.py", line 8406, in action_build retval = mergetask.merge(pkglist, favorites, mtimedb) File "/usr/lib64/portage/pym/_emerge/__init__.py", line 5588, in merge return self._merge(mylist, favorites, mtimedb) File "/usr/lib64/portage/pym/_emerge/__init__.py", line 5906, in _merge blockers=self._find_blockers(pkg)) File "/usr/lib64/portage/pym/portage/__init__.py", line 5349, in merge mydbapi=mydbapi, prev_mtimes=prev_mtimes) File "/usr/lib64/portage/pym/portage/dbapi/vartree.py", line 2746, in merge mydbapi=mydbapi, prev_mtimes=prev_mtimes) File "/usr/lib64/portage/pym/portage/dbapi/vartree.py", line 2754, in _merge cleanup=cleanup, mydbapi=mydbapi, prev_mtimes=prev_mtimes) File "/usr/lib64/portage/pym/portage/dbapi/vartree.py", line 2341, in treewalk others_in_slot=others_in_slot) File "/usr/lib64/portage/pym/portage/dbapi/vartree.py", line 1315, in unmerge consumers = self.vartree.dbapi.linkmap.findConsumers(f) File "/usr/lib64/portage/pym/portage/dbapi/vartree.py", line 220, in findConsumers raise KeyError("%s not in object list" % obj) KeyError: '/usr/lib64/libgcrypt.so.11.4.3 not in object list'
Please keep comments about the KeyError exception on bug #223591
Fixed in or before 2.2_pre8
