Bug 215738 – sci-libs/scipy-0.5.2 emerge fails on amd64

• Status: RESOLVED WONTFIX
• Product: Gentoo Linux

[Description Giovani M. Faccin 2008-04-01 18:30:13 UTC]

Emerge fails on this package. There's something that the ebuild depends on, but is not actually listed as a dependency in the ebuild.

Reproducible: Always

Steps to Reproduce:
1.Simply try to emerge the package.
2.
3.

Actual Results:  
Emerge fails

Expected Results:  
Package should have compiled.

System info:

sonja gfaccin # emerge --info
Portage 2.1.4.4 (default-linux/amd64/2007.0, gcc-4.1.2, glibc-2.6.1-r0, 2.6.24-g                                                          
entoo-r3 x86_64)
=================================================================
System uname: 2.6.24-gentoo-r3 x86_64 Intel(R) Core(TM)2 Duo CPU T7500 @ 2.20GHz
Timestamp of tree: Sat, 29 Mar 2008 15:45:01 +0000
app-shells/bash:     3.2_p17-r1
dev-java/java-config: 1.3.7, 2.1.4
dev-lang/python:     2.4.4-r6, 2.5.1-r5
dev-python/pycrypto: 2.0.1-r6
sys-apps/baselayout: 1.12.11.1
sys-apps/sandbox:    1.2.18.1-r2
sys-devel/autoconf:  2.13, 2.61-r1
sys-devel/automake:  1.5, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10
sys-devel/binutils:  2.18-r1
sys-devel/gcc-config: 1.4.0-r4
sys-devel/libtool:   1.5.26
virtual/os-headers:  2.6.23-r3
ACCEPT_KEYWORDS="amd64"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -pipe -msse3 -march=nocona"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shu                                                          
tdown /usr/share/config"
CONFIG_PROTECT_MASK="/etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gcon                                                          
f /etc/revdep-rebuild /etc/terminfo /etc/texmf/web2c /etc/udev/rules.d"
CXXFLAGS="-O2 -pipe -msse3 -march=nocona"
DISTDIR="/usr/portage/distfiles"
FEATURES="distlocks metadata-transfer parallel-fetch sandbox sfperms strict unme                                                          
rge-orphans userfetch"
GENTOO_MIRRORS="http://www.gtlib.gatech.edu/pub/gentoo ftp://ftp.las.ic.unicamp.                                                          
br/pub/gentoo/ "
LANG="C"
PKGDIR="/usr/portage/packages"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress                                                           
--force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclu                                                          
de=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
SYNC="rsync://rsync.samerica.gentoo.org/gentoo-portage"
USE="X acl alsa amd64 berkdb cdr cli cracklib crypt cups doc dri dvd dvdread fir                                                          
efox fortran gdbm gpm gtk gtk2 hal iconv ipv6 isdnlog java jpeg kde lm_sensors m                                                          
idi mmx mp3 mudflap ncurses new-login nls nptl nptlonly nptonly nsplugin opengl                                                           
openmp pam pcre pdf perl png pppd python qt3 qt4 readline reflection samba sessi                                                          
on spl sse sse2 ssl tcpd threads tiff unicode wifi xml xorg zlib" ALSA_CARDS="al                                                          
i5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 e                                                          
s1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82                                                          
xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsno                                                          
op empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mulaw multi                                                          
 null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_bas                                                          
ic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_def                                                          
ault authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_f                                                          
s dav_lock deflate dir disk_cache env expires ext_filter file_cache filter heade                                                          
rs include info log_config logio mem_cache mime mime_magic negotiation rewrite s                                                          
etenvif speling status unique_id userdir usertrack vhost_alias" ELIBC="glibc" IN                                                          
PUT_DEVICES="keyboard mouse evdev synaptics" KERNEL="linux" LCD_DEVICES="bayrad                                                           
cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" USERLAND="GNU" V                                                          
IDEO_CARDS="vesa-intel i810"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, LDFLAGS, L                                                          
INGUAS, MAKEOPTS, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_                                                          
OPTS

[Comment 1 Giovani M. Faccin 2008-04-01 18:32:55 UTC]

Created attachment 147988 [details]
Build log for the package

[Comment 2 Sébastien Fabbro (RETIRED) 2008-04-02 08:38:49 UTC]

Hi Giovani,

Unless you really need scipy-0.5.2, I strongly advise to move to scipy-0.6.0-r4. Both of them are marked ~amd64. Let me know, so we can remove obsolete and buggy versions.

[Comment 3 Sébastien Fabbro (RETIRED) 2008-04-22 08:34:54 UTC]

scipy-0.5.2 removed from the tree, it had many issues.
Re-open only if you have similar problems with scipy-0.6.0-r4.
Thanks