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Bug 213881 - sci-biology/ecell-3.1.106 (new ebuild)
Summary: sci-biology/ecell-3.1.106 (new ebuild)
Status: RESOLVED WONTFIX
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: New packages (show other bugs)
Hardware: All Linux
: High enhancement
Assignee: Gentoo Linux bug wranglers
URL:
Whiteboard:
Keywords: EBUILD
Depends on:
Blocks:
 
Reported: 2008-03-19 02:01 UTC by Bernhard Kraft
Modified: 2008-03-19 15:22 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
ecell-3.1.106 ebuild (ecell-3.1.106.ebuild,543 bytes, text/plain)
2008-03-19 02:02 UTC, Bernhard Kraft
Details

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Description Bernhard Kraft 2008-03-19 02:01:11 UTC
ecell is a tool aiming to simulate whole cells using numerical and statistical methods.

Have a look at the follwing URL for further information on the project:
http://www.e-cell.org/

Reviewed it together with some of the devs at #gentoo-sunrise.

Both commandline and gtk mode seem to work on amd64.



Reproducible: Always
Comment 1 Bernhard Kraft 2008-03-19 02:02:06 UTC
Created attachment 146537 [details]
ecell-3.1.106 ebuild
Comment 2 Jakub Moc (RETIRED) gentoo-dev 2008-03-19 08:05:31 UTC
Sorry, this package has been removed 16 months ago...

http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/ecell/?hideattic=0
Comment 3 Bernhard Kraft 2008-03-19 08:34:39 UTC
What is/was the reson for removal ?
Comment 4 Jakub Moc (RETIRED) gentoo-dev 2008-03-19 08:49:31 UTC
Broken w/ gcc-4.x for ages.
Comment 5 Bernhard Kraft 2008-03-19 15:22:16 UTC
Using this config on amd64:

-----------------
kraftb@oxygen ~ $ gcc-config -l
 [1] x86_64-pc-linux-gnu-3.4.6
 [2] x86_64-pc-linux-gnu-3.4.6-hardened
 [3] x86_64-pc-linux-gnu-3.4.6-hardenednopie
 [4] x86_64-pc-linux-gnu-3.4.6-hardenednopiessp
 [5] x86_64-pc-linux-gnu-3.4.6-hardenednossp
 [6] x86_64-pc-linux-gnu-4.1.2 *
-------------------

It worked for me out of the box. What exactly is broken? Compiling or features of the software itself?

I think I would have the time to fix bugs concerning gcc-4.x - if this is the only reason for not including it in the portage tree.

If there are any objections moving it into the main portage tree - would it be ok to add it to the gentoo-sunrise overlay ?