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Bug 21308 - ELPH -- general-purpose Gibbs sampler for finding motifs in a set of DNA or protein sequences
Summary: ELPH -- general-purpose Gibbs sampler for finding motifs in a set of DNA or p...
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: New packages (show other bugs)
Hardware: All Linux
: High enhancement
Assignee: Jon Portnoy (RETIRED)
URL: http://www.tigr.org/software/ELPH/ind...
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2003-05-19 21:30 UTC by Stephen Diener (RETIRED)
Modified: 2003-05-22 11:43 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---

Attachments
elph-20030519.ebuild (elph-20030519.ebuild,671 bytes, text/plain)
2003-05-19 21:33 UTC, Stephen Diener (RETIRED) 		Details
motif.cc.diff (motif.cc.diff,1.60 KB, patch)
2003-05-19 21:34 UTC, Stephen Diener (RETIRED) 		Details | Diff
elph-20030521.ebuild (elph-20030521.ebuild,598 bytes, text/plain)
2003-05-21 08:49 UTC, Stephen Diener (RETIRED) 		Details
elph-0.1.2.ebuild (elph-0.1.2.ebuild,604 bytes, text/plain)
2003-05-21 23:01 UTC, Stephen Diener (RETIRED) 		Details
Show Obsolete (3) View All Add an attachment (proposed patch, testcase, etc.)

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Description Stephen Diener (RETIRED) gentoo-dev 2003-05-19 21:30:24 UTC 
new ebuild...
Comment 1 Stephen Diener (RETIRED) gentoo-dev 2003-05-19 21:33:04 UTC 
Created attachment 12182 [details]
elph-20030519.ebuild
Comment 2 Stephen Diener (RETIRED) gentoo-dev 2003-05-19 21:34:42 UTC 
Created attachment 12183 [details, diff]
motif.cc.diff

patch to make it motif.cc compile without errors
Comment 3 Stephen Diener (RETIRED) gentoo-dev 2003-05-21 08:49:37 UTC 
Created attachment 12247 [details]
elph-20030521.ebuild

Sent the patch to the authors and they fixed the problem so it is no longer
needed.
Comment 4 Stephen Diener (RETIRED) gentoo-dev 2003-05-21 23:01:02 UTC 
Created attachment 12276 [details]
elph-0.1.2.ebuild

I requested that they add version numbering to their tarballs and they did so
here is the new ebuild...
Comment 5 Jon Portnoy (RETIRED) gentoo-dev 2003-05-22 11:43:58 UTC 
Perfect. In the tree, thanks - no changes on my part were necessary :)