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Bug 190081 - dev-perl/XML-LibXML-1.62.001-r1 does not emerge (IOError: [Errno 22])
Summary: dev-perl/XML-LibXML-1.62.001-r1 does not emerge (IOError: [Errno 22])
Status: RESOLVED CANTFIX
Alias: None
Product: Portage Development
Classification: Unclassified
Component: Core - Interface (emerge) (show other bugs)
Hardware: AMD64 Linux
: High normal (vote)
Assignee: Portage team
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2007-08-24 20:18 UTC by Hermann Huttler
Modified: 2007-08-25 06:24 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---


Attachments
complete log of emerge (log.txt,16.93 KB, text/plain)
2007-08-24 20:18 UTC, Hermann Huttler
Details

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Description Hermann Huttler 2007-08-24 20:18:10 UTC
The package seems to compile fine.However when the files are being merged to / emerge bails out with the following error message:

(for complete log see attached file)

Traceback (most recent call last):
  File "/usr/bin/emerge", line 5676, in ?
    retval = emerge_main()
  File "/usr/bin/emerge", line 5669, in emerge_main
    myopts, myaction, myfiles, spinner)
  File "/usr/bin/emerge", line 5136, in action_build
    retval = mergetask.merge(pkglist, favorites, mtimedb)
  File "/usr/bin/emerge", line 3273, in merge
    prev_mtimes=ldpath_mtimes)
  File "/usr/lib64/portage/pym/portage.py", line 3872, in doebuild
    vartree=vartree, prev_mtimes=prev_mtimes)
  File "/usr/lib64/portage/pym/portage.py", line 4086, in merge
    mydbapi=mydbapi, prev_mtimes=prev_mtimes)
  File "/usr/lib64/portage/pym/portage.py", line 8047, in merge
    cleanup=cleanup, mydbapi=mydbapi, prev_mtimes=prev_mtimes)
  File "/usr/lib64/portage/pym/portage.py", line 7641, in treewalk
    if self.mergeme(srcroot,destroot,outfile,secondhand,"",cfgfiledict,mymtime):
  File "/usr/lib64/portage/pym/portage.py", line 7919, in mergeme
    join(offset, x), cfgfiledict, thismtime):
  File "/usr/lib64/portage/pym/portage.py", line 7919, in mergeme
    join(offset, x), cfgfiledict, thismtime):
  File "/usr/lib64/portage/pym/portage.py", line 7919, in mergeme
    join(offset, x), cfgfiledict, thismtime):
  File "/usr/lib64/portage/pym/portage.py", line 7919, in mergeme
    join(offset, x), cfgfiledict, thismtime):
  File "/usr/lib64/portage/pym/portage.py", line 7919, in mergeme
    join(offset, x), cfgfiledict, thismtime):
  File "/usr/lib64/portage/pym/portage.py", line 7919, in mergeme
    join(offset, x), cfgfiledict, thismtime):
  File "/usr/lib64/portage/pym/portage.py", line 7919, in mergeme
    join(offset, x), cfgfiledict, thismtime):
  File "/usr/lib64/portage/pym/portage.py", line 7919, in mergeme
    join(offset, x), cfgfiledict, thismtime):
  File "/usr/lib64/portage/pym/portage.py", line 7919, in mergeme
    join(offset, x), cfgfiledict, thismtime):
  File "/usr/lib64/portage/pym/portage.py", line 7923, in mergeme
    mymd5=portage_checksum.perform_md5(mysrc,calc_prelink=1)
  File "/usr/lib64/portage/pym/portage_checksum.py", line 78, in perform_md5
    return perform_checksum(x, "MD5", calc_prelink)[0]
  File "/usr/lib64/portage/pym/portage_checksum.py", line 205, in perform_checksum
    myhash, mysize = hashfunc_map[hashname](myfilename)
  File "/usr/lib64/portage/pym/portage_checksum.py", line 32, in md5hash
    return fchksum.fmd5t(filename)
IOError: [Errno 22] Invalid argument: '/var/lib/portage/prelink-checksum.tmp.7464'



Reproducible: Always

Steps to Reproduce:




Portage 2.1.2.12 (default-linux/amd64/2006.1, gcc-4.1.2, glibc-2.5-r4, 2.6.23-rc1-mm1 x86_64)
=================================================================
System uname: 2.6.23-rc1-mm1 x86_64 AMD Athlon(tm) 64 Processor 3700+
Gentoo Base System release 1.12.9
Timestamp of tree: Fri, 24 Aug 2007 19:00:09 +0000
dev-java/java-config: 1.3.7, 2.0.33-r1
dev-lang/python:     2.4.4-r4
dev-python/pycrypto: 2.0.1-r6
sys-apps/sandbox:    1.2.17
sys-devel/autoconf:  2.13, 2.61
sys-devel/automake:  1.5, 1.7.9-r1, 1.9.6-r2, 1.10
sys-devel/binutils:  2.17
sys-devel/gcc-config: 1.3.16
sys-devel/libtool:   1.5.24
virtual/os-headers:  2.6.22-r2
ACCEPT_KEYWORDS="amd64"
AUTOCLEAN="yes"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=athlon64 -mtune=k8 -O2 -pipe -fomit-frame-pointer"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/share/X11/xkb /usr/share/config"
CONFIG_PROTECT_MASK="/etc/env.d /etc/env.d/java/ /etc/gconf /etc/revdep-rebuild /etc/terminfo /etc/texmf/web2c"
CXXFLAGS="-march=athlon64 -mtune=k8 -O2 -pipe -fomit-frame-pointer"
DISTDIR="/lan/freigabe/gentoo"
FEATURES="autoaddcvs distlocks metadata-transfer sandbox sfperms strict userpriv usersandbox"
GENTOO_MIRRORS="ftp://gd.tuwien.ac.at/opsys/linux/gentoo/ ftp://gentoo.inode.at/source/ "
LANG="de_DE@euro"
LC_ALL="de_DE@euro"
LINGUAS="de"
PKGDIR="/usr/portage/packages"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --delete-after --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --filter=H_**/files/digest-*"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/usr/local/portage"
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="X aalib alsa amd64 arts berkdb bitmap-fonts bluetooth bzip2 cdrdvd cli cracklib crypt cups dri dvb dvd dvdread fortran gdbm gimpprint gpm gtk iconv ipv6 isdnlog jpeg kde libcaca midi mudflap ncurses nls nptl nptlonly openmp pam pcre pdf perl png ppds pppd python qt quicktime readline reflection samba session spl ssl svg tcpd tiff truetype truetype-fonts type1-fonts unicode userlocales vorbis xorg zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mulaw multi null plug rate route share shm softvol" ELIBC="glibc" INPUT_DEVICES="keyboard mouse" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="de" USERLAND="GNU" VIDEO_CARDS="radeon ati"
Unset:  CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LDFLAGS, MAKEOPTS, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Comment 1 Hermann Huttler 2007-08-24 20:18:53 UTC
Created attachment 129091 [details]
complete log of emerge
Comment 2 Zac Medico gentoo-dev 2007-08-24 21:33:54 UTC
It looks like you're having kernel and/or filesystem trouble. Maybe something is wrong with that -mm kernel you're running. What filesystem type is /var/lib/portage/ on?
Comment 3 Hermann Huttler 2007-08-25 06:24:01 UTC
Thanks for your suggestion! Partition is a reiserfs4 file system. Upgraded to kernel 2.6.23-rc3-mm1 and it worked.