cp -p libblastapi.a ../lib ranlib ../lib/libblastapi.a i686-pc-linux-gnu-gcc -pipe -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -o asntool -O2 -march=pentium4 -mmmx -msse -msse2 -fomit-frame-pointer -pipe -I../include -I/usr/X11R6/include -L/usr/X11R6/lib -DWIN_MOTIF -L../lib asntool.c asncode.c ../lib/libncbi.a -lm ../lib/libncbi.a(ncbifile.o): In function `Nlm_TmpNam': ncbifile.c:(.text+0x9a2): warning: the use of `tempnam' is dangerous, better use `mkstemp' cp -p asntool ../bin /usr/bin/pmake -f makedemo.unx CFLAGS1="-DNDEBUG -O2 -march=pentium4 -mmmx -msse -msse2 -fomit-frame-pointer -pipe -c -O2 -march=pentium4 -mmmx -msse -msse2 -fomit-frame-pointer -pipe" LDFLAGS1="-O2 -march=pentium4 -mmmx -msse -msse2 -fomit-frame-pointer -pipe" SHELL="/bin/sh" LCL="lnx" RAN="ranlib" AR="ar" CC="i686-pc-linux-gnu-gcc -pipe -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE" ./ln-if-absent ../demo/*.* . ./ln-if-absent ../regexp/test/*.* . ./ln-if-absent ../regexp/demo/*.* . ./ln-if-absent ../internal/*.* . set: No match. *** Error code 1 (ignored) chmod -R ug+rw,o+r . i686-pc-linux-gnu-gcc -pipe -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -o testcore -O2 -march=pentium4 -mmmx -msse -msse2 -fomit-frame-pointer -pipe -I../include -L../lib testcore.c -lncbi -lm ../lib/libncbi.a(ncbifile.o): In function `Nlm_TmpNam': ncbifile.c:(.text+0x9a2): warning: the use of `tempnam' is dangerous, better use `mkstemp' i686-pc-linux-gnu-gcc -pipe -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -o makeset -O2 -march=pentium4 -mmmx -msse -msse2 -fomit-frame-pointer -pipe -I../include -L../lib makeset.c -lncbiobj -lncbi -lm Portage 2.1.1_pre2-r2 (default-linux/x86/2006.0, gcc-3.4.6/vanilla, glibc-2.4-r3, 2.6.17 i686) ================================================================= System uname: 2.6.17 i686 Mobile Intel(R) Pentium(R) 4 - M CPU 1.80GHz Gentoo Base System version 1.12.1 dev-lang/python: 2.3.4-r1, 2.4.3-r1 dev-python/pycrypto: 2.0.1-r5 dev-util/ccache: [Not Present] dev-util/confcache: [Not Present] sys-apps/sandbox: 1.2.18.1 sys-devel/autoconf: 2.13, 2.60 sys-devel/automake: 1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2 sys-devel/binutils: 2.17 sys-devel/gcc-config: 2.0.0_rc1 sys-devel/libtool: 1.5.22 virtual/os-headers: 2.6.11-r5 ACCEPT_KEYWORDS="x86 ~x86" AUTOCLEAN="yes" CBUILD="i686-pc-linux-gnu" CFLAGS="-O2 -march=pentium4 -mmmx -msse -msse2 -fomit-frame-pointer -pipe" CHOST="i686-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/lib/mozilla/defaults/pref /usr/share/X11/xkb /u sr/share/config /usr/spool/PBS /var/bind /var/qmail/alias /var/qmail/control /var/spool/PBS /var/vpopmail/domains /var/vpopmail/etc" CONFIG_PROTECT_MASK="/etc/env.d /etc/eselect/compiler /etc/gconf /etc/revdep-rebuild /etc/terminfo /etc/texmf/web2c" CXXFLAGS="-O2 -march=pentium4 -mmmx -msse -msse2 -fomit-frame-pointer -pipe" DISTDIR="/usr/portage/distfiles" FEATURES="autoconfig distlocks metadata-transfer sandbox sfperms strict" GENTOO_MIRRORS="http://distfiles.gentoo.org http://distro.ibiblio.org/pub/linux/distributions/gentoo" PKGDIR="/usr/portage/packages" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --delete-after --stats --tim eout=180 --exclude='/distfiles' --exclude='/local' --exclude='/packages'" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/usr/local/portage" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="x86 FFmpeg X Xaw3d a52 aac aalib acpi alsa amr apache2 apm asf ati avi berkdb bitmap-fonts bonobo caca cdparanoia cdr cli cpudetectio n crypt cscope ctype cups curl dba dga directfb divx divx5 divx5linux dlloader dri dts dv dvb dvd dvdr dvdread eds emacs emacs-w3 emboss e ncode ethereal evo f77 faad faad2 fam fame fbcon ffmpeg flac flash foomaticdb fortran fvwm fvwm2 gb gd gdbm ggi gif gphoto2 gpm gstreamer gtk gtk2 gtkhtml i8x0 icc iconv ieee1394 ifc imagemagick imlib imlib2 inifile innodb isdnlog ithreads java jpeg kerberos lcms leim libcaca libg++ libwww lirc live lzo mad matroska mcal mesa mhash mikmod ming mmx mmx2 mmxext modplug motif mozilla mp3 mpeg mule musepack mysql n curses network nls nptl nptlonly ogg oggvorbis opengl oss pam pcre pda pdflib perl plotutils plugin png ppds pppd pthread pthreads python qt qt3 qt4 qtx quicktime readline reflection rtc samba scanner scp server session slp spell spl sse sse2 ssl stroke tcltk tcpd tetex theor a thread threads tiff truetype truetype-fonts type1-fonts udev unicode usb userlocales v4l v4l2 vcd vorbis win32codecs winvidix wmf x264 x anim xml xml2 xmms xorg xosd xprint xv xvid xvmc zeo zlib elibc_glibc input_devices_keyboard input_devices_mouse input_devices_evdev kerne l_linux userland_GNU video_cards_ati" Unset: CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, LDFLAGS, LINGUAS, MAKEOPTS, PORTAGE_RSYNC_EXTRA_OPTS
Hi Martin, I cannot figure out exactly what the bug is from the output you attached. The "set: No match error" is ignored and the compilation seems to go on afterwards. Could you please explain what the problem is and post the remainder of the compile output (if relevant)?
Hi Olivier, the output is from the compile step. The process however did continue and succeeded to compile the rest of the code and install. I have reported the bug because I think it gets not recognized because of the very looong output during the src_compile step. I have no idea whether it affects functionality, sorry. I do not know why the make process does not die on error. And the "chmod -R ug+rw,o+r ." is really ugly though I guess it modofes some directory under the /var/tmp/portage/ tree.
(In reply to comment #2) > I do not know why the make process does not die on error. This is done on purpose. make catches the error and ignores it. This is a pretty popular technique. The build system/process is pretty ugly, but does it work, and I am pretty sure there is nothing to worry about in the present case. (Feel free to reopen if I am mistaken.) Cheers,
