Hi there, after installing lam-mpi-7.1.1 on my computer, specifying USE=-crypt to enable rsh communication in place of ssh one, I have errors launching it: $ lamboot LAM 7.1.1/MPI 2 C++/ROMIO - Indiana University ERROR: LAM/MPI unexpectedly received the following on stderr: localshell: line 0: [: missing `]' ----------------------------------------------------------------------------- LAM attempted to execute a process on the remote node "node1.sge.ifom-ieo-campus.it", but received some output on the standard error. This heuristic assumes that any output on the standard error indicates a fatal error, and therefore aborts. You can disable this behavior (i.e., have LAM ignore output on standard error) in the rsh boot module by setting the SSI parameter boot_rsh_ignore_stderr to 1. LAM tried to use the remote agent command "rsh" to invoke "hboot" on the remote node. *** PLEASE READ THIS ENTIRE MESSAGE, FOLLOW ITS SUGGESTIONS, AND *** CONSULT THE "BOOTING LAM" SECTION OF THE LAM/MPI FAQ *** (http://www.lam-mpi.org/faq/) BEFORE POSTING TO THE LAM/MPI USER'S *** MAILING LIST. This can indicate an authentication error with the remote agent, or can indicate an error in your $HOME/.cshrc, $HOME/.login, or $HOME/.profile files. The following is a (non-inclusive) list of items that you should check on the remote node: - You have an account and can login to the remote machine - Incorrect permissions on your home directory (should probably be 0755) - Incorrect permissions on your $HOME/.rhosts file (if you are using rsh -- they should probably be 0644) - You have an entry in the remote $HOME/.rhosts file (if you are using rsh) for the machine and username that you are running from - Your .cshrc/.profile must not print anything out to the standard error - Your .cshrc/.profile should set a correct TERM type - Your .cshrc/.profile should set the SHELL environment variable to your default shell Try invoking the following command at the unix command line: rsh node1.sge.ifom-ieo-campus.it -n '( ! [ -e ./.profile] || . ./.profile;' hboot -t -c lam-conf.lamd -s -I '"-H 85.239.175.36 -P 32809 -n 1 -o 0"' ) You will need to configure your local setup such that you will *not* be prompted for a password to invoke this command on the remote node. No output should be printed from the remote node before the output of the command is displayed. When you can get this command to execute successfully by hand, LAM will probably be able to function properly. ----------------------------------------------------------------------------- ERROR: LAM/MPI unexpectedly received the following on stderr: localshell: line 0: [: missing `]' ----------------------------------------------------------------------------- LAM attempted to execute a process on the remote node "node1.sge.ifom-ieo-campus.it", but received some output on the standard error. This heuristic assumes that any output on the standard error indicates a fatal error, and therefore aborts. You can disable this behavior (i.e., have LAM ignore output on standard error) in the rsh boot module by setting the SSI parameter boot_rsh_ignore_stderr to 1. LAM tried to use the remote agent command "rsh" to invoke "tkill" on the remote node. *** PLEASE READ THIS ENTIRE MESSAGE, FOLLOW ITS SUGGESTIONS, AND *** CONSULT THE "BOOTING LAM" SECTION OF THE LAM/MPI FAQ *** (http://www.lam-mpi.org/faq/) BEFORE POSTING TO THE LAM/MPI USER'S *** MAILING LIST. This can indicate an authentication error with the remote agent, or can indicate an error in your $HOME/.cshrc, $HOME/.login, or $HOME/.profile files. The following is a (non-inclusive) list of items that you should check on the remote node: - You have an account and can login to the remote machine - Incorrect permissions on your home directory (should probably be 0755) - Incorrect permissions on your $HOME/.rhosts file (if you are using rsh -- they should probably be 0644) - You have an entry in the remote $HOME/.rhosts file (if you are using rsh) for the machine and username that you are running from - Your .cshrc/.profile must not print anything out to the standard error - Your .cshrc/.profile should set the SHELL environment variable to your default shell Try invoking the following command at the unix command line: rsh node1.sge.ifom-ieo-campus.it -n '( ! [ -e ./.profile] || . ./.profile;' tkill ) You will need to configure your local setup such that you will *not* be prompted for a password to invoke this command on the remote node. No output should be printed from the remote node before the output of the command is displayed. When you can get this command to execute successfully by hand, LAM will probably be able to function properly. ----------------------------------------------------------------------------- I think that is because it launches the following: [ -e ./.profile] where a space is missing before the bracket. $ emerge --info Portage 2.1_rc3-r1 (default-linux/amd64/2005.1, gcc-3.4.3, glibc-2.3.5-r0, 2.6.15-gentoo-r7-smp x86_64) ================================================================= System uname: 2.6.15-gentoo-r7-smp x86_64 AMD Opteron(tm) Processor 252 Gentoo Base System version 1.6.12 dev-lang/python: 2.3.5 dev-python/pycrypto: 2.0.1-r5 dev-util/ccache: [Not Present] dev-util/confcache: [Not Present] sys-apps/sandbox: 1.2.17 sys-devel/autoconf: 2.13, 2.59-r6 sys-devel/automake: 1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.5 sys-devel/binutils: 2.16.1-r2 sys-devel/libtool: 1.5.18-r1 virtual/os-headers: 2.6.11-r2 ACCEPT_KEYWORDS="amd64 ~amd64" AUTOCLEAN="yes" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-mtune=k8 -O2 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/lib/X11/xkb" CONFIG_PROTECT_MASK="/etc/gconf /etc/terminfo /etc/texmf/web2c /etc/env.d" CXXFLAGS="-O2 -pipe" DISTDIR="/usr/portage/distfiles" FEATURES="autoaddcvs autoconfig ccache distcc distlocks metadata-transfer sandbox sfperms strict" GENTOO_MIRRORS="http://mirror.switch.ch/ftp/mirror/gentoo http://distfiles.gentoo.org http://www.ibiblio.org/pub/Linux/distributions/gentoo" MAKEOPTS="-j3" PKGDIR="/usr/portage/packages" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --delete-after --stats --timeout=180 --exclude='/distfiles' --exclude='/local' --exclude='/packages'" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/usr/local/portage" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="amd64 avi berkdb bitmap-fonts cli crypt cups dri eds emboss encode foomaticdb fortran gif gnome gpm gstreamer gtk gtk2 imlib ipv6 isdnlog jpeg kde lzw lzw-tiff mp3 mpeg ncurses nls opengl pam pcre pdflib perl png pppd python qt quicktime readline reflection sdl session spell spl ssl tcpd threads tiff truetype-fonts type1-fonts usb xorg xpm xv zlib elibc_glibc kernel_linux userland_GNU" Unset: CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, LDFLAGS, LINGUAS, PORTAGE_RSYNC_EXTRA_OPTS
Created attachment 88687 [details, diff] Proposal of patch to add the space before the bracket
Fixed in 7.1.2.
