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Bug 135778 - sci-libs/blas-atlas-3.7.11, multiple issues
Summary: sci-libs/blas-atlas-3.7.11, multiple issues
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: New packages (show other bugs)
Hardware: All Linux
: High normal (vote)
Assignee: Gentoo Science Related Packages
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2006-06-06 08:23 UTC by Carsten Lohrke (RETIRED)
Modified: 2007-04-15 23:35 UTC (History)
2 users (show)

See Also:
Package list:
Runtime testing required: ---

Attachments
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Description Carsten Lohrke (RETIRED) gentoo-dev 2006-06-06 08:23:13 UTC 
make[5]: Leaving directory `/var/tmp/portage/blas-atlas-3.7.11/work/ATLAS/tune/blas/level3/Linux_HAMMER32SSE3'
/usr/bin/g77 -DL2SIZE=1048576 -I/var/tmp/portage/blas-atlas-3.7.11/work/ATLAS/include -I/var/tmp/portage/blas-atlas-3.7.11/work/ATLAS/include/Linux_HAMMER32SSE3 -I/var/tmp/portage/blas-atlas-3.7.11/work/ATLAS/include/contrib  -DAdd__ -DStringSunStyle -DATL_OS_Linux -DATL_ARCH_HAMMER32 -DATL_SSE3 -DATL_SSE2 -DATL_SSE1 -DATL_Has3DNow -DATL_GAS_x8632 -Wl,-O1 -o xsinvtrsm sinvtrsm.o ATL_strsm.o \
                   /var/tmp/portage/blas-atlas-3.7.11/work/ATLAS/lib/Linux_HAMMER32SSE3/libtstatlas.a /var/tmp/portage/blas-atlas-3.7.11/work/ATLAS/lib/Linux_HAMMER32SSE3/liblapack.a /var/tmp/portage/blas-atlas-3.7.11/work/ATLAS/lib/Linux_HAMMER32SSE3/libcblas.a /var/tmp/portage/blas-atlas-3.7.11/work/ATLAS/lib/Linux_HAMMER32SSE3/libatlas.a -lm
sinvtrsm.o: In function `BestStop':
invtrsm.c:(.text+0x2db): undefined reference to `clapack_spotrf'
invtrsm.c:(.text+0x312): undefined reference to `clapack_strtri'
invtrsm.c:(.text+0x341): undefined reference to `clapack_slauum'
invtrsm.c:(.text+0x3a3): undefined reference to `clapack_sgetrf'
invtrsm.c:(.text+0x3cf): undefined reference to `clapack_sgetri'
collect2: ld returned 1 exit status
make[4]: *** [xsinvtrsm] Error 1
make[4]: Leaving directory `/var/tmp/portage/blas-atlas-3.7.11/work/ATLAS/tune/blas/level3/Linux_HAMMER32SSE3'


and


QA Notice: the following files contain executable stacks
 Files with executable stacks will not work properly (or at all!)
 on some architectures/operating systems.  A bug should be filed
 at http://bugs.gentoo.org/ to make sure the file is fixed.
 For more information, see http://hardened.gentoo.org/gnu-stack.xml


and


//var/lib/eselect/blas/blas.config: line 3: F77_/lib=ATLAS: No such file or directory
/usr/share/eselect//libs/config.bash: line 63: local: `F77_/lib=': not a valid identifier
//var/lib/eselect/blas/blas.config: line 3: F77_/lib=ATLAS: No such file or directory
Changing BLAS implementation to ATLAS in
  /lib
Affected language interfaces
/usr/share/eselect//libs/config.bash: line 63: local: `F77_/lib=': not a valid identifier
/usr/share/eselect//libs/config.bash: line 63: local: `C_/lib=': not a valid identifier
//var/lib/eselect/blas/blas.config: line 3: F77_/lib=: No such file or directory
//var/lib/eselect/blas/blas.config: line 4: C_/lib=ATLAS: No such file or directory
/usr/share/eselect//libs/config.bash: line 63: local: `F77_/lib=': not a valid identifier
/usr/share/eselect//libs/config.bash: line 63: local: `C_/lib=': not a valid identifier
/usr/share/eselect//libs/config.bash: line 63: local: `C_/lib_CURRENT=': not a valid identifier
//var/lib/eselect/blas/blas.config: line 3: F77_/lib=: No such file or directory
//var/lib/eselect/blas/blas.config: line 4: C_/lib=: No such file or directory
//var/lib/eselect/blas/blas.config: line 5: C_/lib_CURRENT=ATLAS: No such file or directory
  C F77
 *
 * Fortran users link using -lblas
 *
 * C users compile against the header /usr/include/atlas/cblas.h and
 * link using -lcblas
 *

 Please include this file in your report:
 /var/tmp/portage/blas-atlas-3.7.11/temp/scanelf-execstack.log
"RWX --- --- usr/lib/libatlas.so.0.0.0"




Portage 2.1_rc4-r2 (default-linux/x86/2006.0, gcc-3.4.6, glibc-2.3.6-r3, 2.6.16-gentoo-r7 i686)
=================================================================
System uname: 2.6.16-gentoo-r7 i686 AMD Athlon(tm) 64 Processor 3500+
Gentoo Base System version 1.6.14
distcc 2.18.3 i686-pc-linux-gnu (protocols 1 and 2) (default port 3632) [disabled]
ccache version 2.3 [enabled]
dev-lang/python:     2.4.3-r1
dev-python/pycrypto: 2.0.1-r5
dev-util/ccache:     2.3
dev-util/confcache:  0.4.2-r1
sys-apps/sandbox:    1.2.17
sys-devel/autoconf:  2.13, 2.59-r7
sys-devel/automake:  1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2
sys-devel/binutils:  2.16.1-r2
sys-devel/libtool:   1.5.22
virtual/os-headers:  2.6.11-r2
ACCEPT_KEYWORDS="x86"
AUTOCLEAN="yes"
CBUILD="i686-pc-linux-gnu"
CFLAGS="-O2 -march=athlon64 -pipe -fforce-addr -mfpmath=sse"
CHOST="i686-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/NX/etc /usr/NX/home /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/share/X11/xkb /usr/share/config /usr/share/texmf/dvipdfm/config/ /usr/share/texmf/dvips/config/ /usr/share/texmf/tex/generic/config/ /usr/share/texmf/tex/platex/config/ /usr/share/texmf/xdvi/"
CONFIG_PROTECT_MASK="/etc/gconf /etc/revdep-rebuild /etc/terminfo /etc/env.d"
CXXFLAGS="-O2 -march=athlon64 -pipe -fforce-addr -mfpmath=sse -fvisibility-inlines-hidden"
DISTDIR="/usr/portage/distfiles"
FEATURES="autoconfig ccache confcache cvs distlocks fixpackages keeptemp keepwork metadata-transfer noclean nostrip sandbox sfperms strict userpriv usersandbox"
GENTOO_MIRRORS="ftp://ftp.snt.utwente.nl/pub/os/linux/gentoo http://www.ibiblio.org/pub/Linux/distributions/gentoo"
LANG="de_DE@euro"
LDFLAGS="-Wl,-O1"
LINGUAS="de"
MAKEOPTS="-j2"
PKGDIR="/usr/portage/packages"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times  --compress  --force  --whole-file  --delete               --delete-after --stats --timeout=180 --exclude='/distfiles' --exclude='/local' --exclude='/packages'          --exclude-from=/etc/portage/rsync_excludes"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/usr/local/portage"
SYNC="rsync://rsync.europe.gentoo.org/gentoo-portage"
USE="x86 3dnow 3dnowext X aac acl acpi activefilter alsa apache2 apm audiofile avi berkdb bitmap-fonts bzip2 cddb cdparanoia cdr chroot cli crypt css cups curl dbus dga doc dv dvd dvdr editor edl eds emacs emboss encode exif faad fbcon ffmpeg firebird flac fontconfig foomaticdb fortran gcj gcl gd gif glut gphoto2 gpm graphviz gtk2 hal hbci idl idn imagemagick imap imlib isdnlog jack javascript jpeg kde kipi ladcca lcms ldap libg++ libwww lirc lm_sensors lzo mad maildir matroska mbox md5sum mmx mmxext mng mp3 mpeg musepack nas ncurses network nls nptl ofx ogg openexr opengl pam pcap pcre pdflib perl pg-hier php png postgres pppd python qt qt4 quicktime readline reflection rtc ruby samba sasl scanner sdl session skey slp snmp sox spell spl sse sse2 ssl subversion svg svga tcpd tetex theora threads tiff transcode truetype truetype-fonts type1-fonts udev usb vorbis wmf xerces xine xml xml2 xorg xv xvid yaz zeroconf zlib elibc_glibc input_devices_keyboard input_devices_mouse kernel_linux linguas_de userland_GNU video_cards_fbdev video_cards_nvidia video_cards_vesa"
Unset:  CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_RSYNC_EXTRA_OPTS
Comment 1 horatio 2006-07-15 02:07:31 UTC 
Just confirming that the broken-eselect thing also happened to me:

thomas ~ # interactive=1 emerge blas-atlas
[...SNIP the rest of the emerge, which went well...]
Changing BLAS implementation to ATLAS in
  /lib
Affected language interfaces
/usr/share/eselect//libs/config.bash: line 63: local: `F77_/lib=': not a valid identifier
/usr/share/eselect//libs/config.bash: line 63: local: `C_/lib=': not a valid identifier
/usr/share/eselect//libs/config.bash: line 63: local: `C_/lib_CURRENT=': not a valid identifier
/usr/share/eselect//libs/config.bash: line 63: local: `F77_/lib_CURRENT=': not a valid identifier
//var/lib/eselect/blas/blas.config: line 3: F77_/lib=: No such file or directory
//var/lib/eselect/blas/blas.config: line 4: C_/lib=: No such file or directory
//var/lib/eselect/blas/blas.config: line 5: C_/lib_CURRENT=: No such file or directory
//var/lib/eselect/blas/blas.config: line 6: F77_/lib_CURRENT=ATLAS: No such file or directory
/usr/share/eselect//libs/config.bash: line 63: local: `F77_/lib=': not a valid identifier
/usr/share/eselect//libs/config.bash: line 63: local: `C_/lib=': not a valid identifier
/usr/share/eselect//libs/config.bash: line 63: local: `C_/lib_CURRENT=': not a valid identifier
/usr/share/eselect//libs/config.bash: line 63: local: `F77_/lib_CURRENT=': not a valid identifier
//var/lib/eselect/blas/blas.config: line 3: F77_/lib=: No such file or directory
//var/lib/eselect/blas/blas.config: line 4: C_/lib=: No such file or directory
//var/lib/eselect/blas/blas.config: line 5: C_/lib_CURRENT=ATLAS: No such file or directory
//var/lib/eselect/blas/blas.config: line 6: F77_/lib_CURRENT=: No such file or directory
  C F77
 *
 * Fortran users link using -lblas
 *
 * C users compile against the header /usr/include/atlas/cblas.h and
 * link using -lcblas
 *
>>> Regenerating /etc/ld.so.cache...
>>> sci-libs/blas-atlas-3.7.11 merged.
>>> Recording sci-libs/blas-atlas in "world" favorites file...
>>> Auto-cleaning packages...

>>> No outdated packages were found on your system.


 * GNU info directory index is up-to-date.
thomas ~ # emerge --info
Portage 2.1.1_pre2-r8 (default-linux/x86/2006.0, gcc-3.4.6/vanilla, glibc-2.4-r3, 2.6.16-gentoo-r2 i686)
=================================================================
                       System Settings
=================================================================
System uname: 2.6.16-gentoo-r2 i686 Intel(R) Celeron(R) CPU 2.66GHz
Gentoo Base System version 1.6
ccache version 2.4 [enabled]
app-admin/eselect-compiler: 2.0.0_rc2-r1
dev-lang/python:     2.1.3-r1, 2.3.5-r2, 2.4.3-r1
dev-python/pycrypto: 2.0.1-r5
dev-util/ccache:     2.4-r2
dev-util/confcache:  [Not Present]
sys-apps/sandbox:    1.2.18.1
sys-devel/autoconf:  2.13, 2.60
sys-devel/automake:  1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2
sys-devel/binutils:  2.17
sys-devel/gcc-config: 2.0.0_rc1
sys-devel/libtool:   1.5.22
virtual/os-headers:  2.6.11-r5
ACCEPT_KEYWORDS="x86 ~x86"
AUTOCLEAN="yes"
CBUILD="i686-pc-linux-gnu"
CFLAGS="-O3 -march=pentium2 -pipe"
CHOST="i686-pc-linux-gnu"
CONFIG_PROTECT="/etc"
CONFIG_PROTECT_MASK="/etc/env.d /etc/gconf"
CXXFLAGS="-O3 -march=pentium2 -pipe"
DISTDIR="/usr/portage/distfiles"
FEATURES="autoconfig ccache distlocks metadata-transfer parallel-fetch sandbox sfperms strict"
GENTOO_MIRRORS="http://gentoo.osuosl.org/ ftp://planetmirror.com/pub/gentoo/ ftp://mirror.pacific.net.au/linux/Gentoo"LINGUAS="en_AU en_GB en_US en ja zh_CN"
MAKEOPTS="-j2"
PKGDIR="/usr/portage/packages"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --delete-after --stats --timeout=180 --exclude='/distfiles' --exclude='/local' --exclude='/packages'"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/usr/local/portage"
SYNC="rsync://rsync.au.gentoo.org/gentoo-portage"
USE="x86 X aac alsa apache2 apm arts avi berkdb bitmap-fonts blas bzip2 cairo cdr cjk clamav cli crypt cups dba dbm dlloader doc dri dvd eds emacs emboss encode esd examples expat firefox foomaticdb fortran ftp gd gdbm gif gimp gnome gpgme gphoto2 gpm gstreamer gtk gtk2 gtkhtml guile hal howl icq ieee1394 imagemagick imap imlib innodb ipv6 isdnlog jabber java javascript jpeg kde lapack libg++ libwww mad mbox mikmod mime mono motif mp3 mpeg mysql ncurses nls nntp nptl nptlonly nsplugin offensive ogg opengl oss pam pcre pdf pdflib perl php png postgres ppds pppd prelude python qt qt3 qt4 quicktime readline reflection samba sasl scanner sdl session slang slp smime source spell spl sqlite sqlite3 ssl svg tcltk tcpd tetex tiff truetype truetype-fonts type1-fonts udev unicode usb vhosts vorbis wxwindows xml xmms xorg xv zlib elibc_glibc input_devices_keyboard input_devices_mouse kernel_linux linguas_en_AU linguas_en_GB linguas_en_US linguas_en linguas_ja linguas_zh_CN userland_GNU video_cards_vga video_cards_i810 video_cards_vesa video_cards_vbdev"
Unset:  CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, LDFLAGS, PORTAGE_RSYNC_EXTRA_OPTS

[...A direct "eselect blas list" also broke...]
Comment 2 Donnie Berkholz (RETIRED) gentoo-dev 2006-07-15 09:47:38 UTC 
We've got new eselect modules masked and revision bumps of all the ebuilds supporting them, I wouldn't worry too much about eselect errors right now.
Comment 3 Donnie Berkholz (RETIRED) gentoo-dev 2006-08-20 15:56:03 UTC 
3.7.11 now uses blas-config instead of eselect, and the masked stuff uses different eselect so that's no longer an issue.
Comment 4 Fabio Rossi 2006-09-27 13:25:56 UTC 
I confirm the undefined reference errors with blas-atlas 3.7.11 and

Gentoo Base System version 1.12.5
Portage 2.1.1 (default-linux/x86/2006.1, gcc-3.4.6, glibc-2.4-r3, 2.6.17-gentoo-r8 i686)
=================================================================
System uname: 2.6.17-gentoo-r8 i686 AMD Athlon(tm) Processor
Gentoo Base System version 1.12.5
Last Sync: Mon, 25 Sep 2006 18:00:01 +0000
distcc 2.18.3 i686-pc-linux-gnu (protocols 1 and 2) (default port 3632) [disabled]
ccache version 2.3 [disabled]
app-admin/eselect-compiler: [Not Present]
dev-java/java-config: 1.2.11-r1
dev-lang/python:     2.3.5-r2, 2.4.3-r1
dev-python/pycrypto: 2.0.1-r5
dev-util/ccache:     2.3
dev-util/confcache:  [Not Present]
sys-apps/sandbox:    1.2.17
sys-devel/autoconf:  2.13, 2.59-r7
sys-devel/automake:  1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2
sys-devel/binutils:  2.16.1-r3
sys-devel/gcc-config: 1.3.13-r3
sys-devel/libtool:   1.5.22
virtual/os-headers:  2.6.17-r1
ACCEPT_KEYWORDS="x86"
AUTOCLEAN="yes"
CBUILD="i686-pc-linux-gnu"
CFLAGS="-O2 -march=athlon-tbird -pipe"
CHOST="i686-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/share/X11/xkb /usr/share/config /usr/share/texmf/dvipdfm/config/ /usr/share/texmf/dvips/config/ /usr/share/texmf/tex/generic/config/ /usr/share/texmf/tex/platex/config/ /usr/share/texmf/xdvi/"
CONFIG_PROTECT_MASK="/etc/env.d /etc/gconf /etc/revdep-rebuild /etc/splash /etc/terminfo"
CXXFLAGS="-O2 -march=athlon-tbird -pipe"
DISTDIR="/mnt/lfs/distfiles/"
FEATURES="autoconfig distlocks metadata-transfer sandbox sfperms strict"
GENTOO_MIRRORS="http://www.die.unipd.it/pub/Linux/distributions/gentoo-sources/"
LANG="it_IT.UTF-8"
LINGUAS=""
MAKEOPTS="-j2"
PKGDIR="/usr/portage/packages"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --delete-after --stats --timeout=180 --exclude='/distfiles' --exclude='/local' --exclude='/packages'"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/usr/local/portage"
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="x86 3dnow 3dnowext X aac acl alsa apache2 arts asf audiofile bash-completion berkdb bitmap-fonts blas boehm-gc bonobo browserplugin bzip2 cairo caps cddb cdparanoia cdr chroot cli cmucl crypt cups curl directfb dlloader dri dv dvb elibc_glibc encode ethereal examples exif expat fame fbcon ffmpeg fftw firefox flac foomaticdb fortran fpx gcj gd gdbm gif gimpprint ginac glut gmp gnutls gphoto2 gpm graphviz gs gsl gtk gtk2 gtkhtml guile idn imagemagick imlib innodb input_devices_keyboard input_devices_mouse isdnlog java jbig jpeg jpeg2k kde kdeenablefinal kernel_linux lcms libg++ libwww live lm_sensors logitech-mouse lzo mad mhash mime mjpeg mmx mmxext mng motif mozdevelop mozsvg mozxmlterm mp3 mpeg mysql ncurses network nls nntp nptl nptlonly odbc ogg opengl oss pam pcre pdf perl php plotutils png postgres ppds pppd python qt qt3 quicktime readline real recode reflection samba sdk sdl session skey smime speex spell spl sql ssl stats subversion svg tcl tcltk tcpd tetex theora threads tiff tk truetype truetype-fonts type1 type1-fonts udev unicode usb userland_GNU utf8 video_cards_fbdev video_cards_radeon video_cards_v4l video_cards_vesa video_cards_vga vim vim-with-x vorbis wifi win32codecs wmf wxgtk1 wxwindows xanim xine xml xmms xorg xv xvid yv12 zlib"
Unset:  CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, LDFLAGS, PORTAGE_RSYNC_EXTRA_OPTS

and with

Gentoo Base System version 1.12.5
Portage 2.1.1 (default-linux/x86/2006.1, gcc-3.4.6, glibc-2.4-r3, 2.6.17-gentoo-r8 i686)
=================================================================
System uname: 2.6.17-gentoo-r8 i686 Intel(R) Pentium(R) III Mobile CPU      1200MHz
Last Sync: Mon, 18 Sep 2006 18:00:06 +0000
app-admin/eselect-compiler: [Not Present]
dev-java/java-config: 1.2.11-r1
dev-lang/python:     2.3.5-r2, 2.4.3-r1
dev-python/pycrypto: 2.0.1-r5
dev-util/ccache:     [Not Present]
dev-util/confcache:  [Not Present]
sys-apps/sandbox:    1.2.17
sys-devel/autoconf:  2.13, 2.59-r7
sys-devel/automake:  1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2
sys-devel/binutils:  2.16.1-r3
sys-devel/gcc-config: 1.3.13-r3
sys-devel/libtool:   1.5.22
virtual/os-headers:  2.6.17-r1
ACCEPT_KEYWORDS="x86"
AUTOCLEAN="yes"
CBUILD="i686-pc-linux-gnu"
CFLAGS="-O2 -march=i686 -pipe"
CHOST="i686-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/share/X11/xkb /usr/share/config /usr/share/texmf/dvipdfm/config/ /usr/share/texmf/dvips/config/ /usr/share/texmf/tex/generic/config/ /usr/share/texmf/tex/platex/config/ /usr/share/texmf/xdvi/"
CONFIG_PROTECT_MASK="/etc/env.d /etc/gconf /etc/revdep-rebuild /etc/terminfo"
CXXFLAGS="-O2 -march=i686 -pipe"
DISTDIR="/usr/portage/distfiles"
FEATURES="autoconfig distlocks metadata-transfer sandbox sfperms strict"
GENTOO_MIRRORS="http://www.die.unipd.it/pub/Linux/distributions/gentoo-sources/ http://ftp.students.cs.unibo.it/gentoo/"
LANG="it_IT.UTF-8"
LINGUAS=""
MAKEOPTS="-j2"
PKGDIR="/usr/portage/packages"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --delete-after --stats --timeout=180 --exclude='/distfiles' --exclude='/local' --exclude='/packages'"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/usr/local/portage"
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="x86 X aac acl alsa arts asf audiofile bash-completion berkdb bitmap-fonts blas boehm-gc browserplugin bzip2 cairo cddb cdparanoia cdr chroot clamav cli cmucl crypt cups curl dlloader dri dv dvb dvd dvdread elibc_glibc encode ethereal examples exif fame fbcon ffmpeg fftw firefox fortran fpx gcj gd gdbm gimpprint gmp gnutls gpm graphviz gs gtk gtk2 gtkhtml imagemagick imlib innodb input_devices_evdev input_devices_keyboard input_devices_mouse input_devices_synaptics isdnlog java jbig jpeg jpeg2k kdeenablefinal kernel_linux lcms libg++ live lm_sensors lzo mad mime mjpeg mmx mozdevelop mozsvg mozxmlterm mpeg ncurses network nls nntp nptl nptlonly nsplugin odbc ogg opengl oss pam pcre perl plotutils png ppds pppd python qt3 readline real reflection sdk sdl session skey smime spl sse ssl stats svg tcltk tcpd theora threads tiff truetype truetype-fonts type1 type1-fonts udev unicode userland_GNU utf8 video_cards_fbdev video_cards_radeon video_cards_vesa video_cards_vga vim-with-x vorbis wifi win32codecs wmf wxgtk1 wxwindows xanim xine xorg xv xvid yv12 zlib"
Unset:  CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, LDFLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Comment 5 Fabio Rossi 2006-09-27 13:26:53 UTC 
With this system no errors:

Gentoo Base System version 1.12.5
Portage 2.1.1 (default-linux/x86/2006.1, gcc-4.1.1, glibc-2.4-r3, 2.6.17-gentoo-r8 i686)
=================================================================
System uname: 2.6.17-gentoo-r8 i686 Intel(R) Pentium(R) 4 CPU 3.00GHz
Last Sync: Mon, 25 Sep 2006 01:53:01 +0000
distcc 2.18.3 i686-pc-linux-gnu (protocols 1 and 2) (default port 3632) [disabled]
ccache version 2.3 [enabled]
app-admin/eselect-compiler: [Not Present]
dev-java/java-config: 1.2.11-r1
dev-lang/python:     2.4.3-r1
dev-python/pycrypto: 2.0.1-r5
dev-util/ccache:     2.3
dev-util/confcache:  [Not Present]
sys-apps/sandbox:    1.2.17
sys-devel/autoconf:  2.13, 2.59-r7
sys-devel/automake:  1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2
sys-devel/binutils:  2.16.1-r3
sys-devel/gcc-config: 1.3.13-r3
sys-devel/libtool:   1.5.22
virtual/os-headers:  2.6.17-r1
ACCEPT_KEYWORDS="x86"
AUTOCLEAN="yes"
CBUILD="i686-pc-linux-gnu"
CFLAGS="-march=prescott -O2 -pipe"
CHOST="i686-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/share/X11/xkb /usr/share/config /usr/share/texmf/dvipdfm/config/ /usr/share/texmf/dvips/config/ /usr/share/texmf/tex/generic/config/ /usr/share/texmf/tex/platex/config/ /usr/share/texmf/xdvi/"
CONFIG_PROTECT_MASK="/etc/env.d /etc/gconf /etc/revdep-rebuild /etc/terminfo"
CXXFLAGS="-march=prescott -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FEATURES="autoconfig ccache distlocks metadata-transfer sandbox sfperms splitdebug strict"
GENTOO_MIRRORS="http://www.die.unipd.it/pub/Linux/distributions/gentoo-sources/"
LANG="it_IT.UTF-8"
LINGUAS=""
MAKEOPTS="-j2"
PKGDIR="/usr/portage/packages"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --delete-after --stats --timeout=180 --exclude='/distfiles' --exclude='/local' --exclude='/packages'"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/usr/local/portage"
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="x86 X aac alsa apache2 arts asf audiofile bash-completion berkdb bitmap-fonts blas browserplugin bzip2 cairo cddb cdparanoia cdr chroot clamav cli cmucl crypt cups curl dlloader dri dv dvb dvd dvdr dvdread elibc_glibc encode ethereal examples exif fame fbcon ffmpeg fftw firefox foomaticdb fortran fpx gcj gd gdbm gif gimpprint ginac gmp gnutls gpm graphviz gs gtk gtk2 gtkhtml idn imagemagick imlib innodb input_devices_keyboard input_devices_mouse ipv6 isdnlog java jbig jpeg jpeg2k kde kdeenablefinal kernel_linux lcms libg++ live lm_sensors lzo mad mime mjpeg mmx mmxext mng motif mozdevelop mozsvg mozxmlterm mp3 mpeg ncurses network nls nntp nptl nptlonly nsplugin odbc ogg opengl oss pam pcre perl plotutils png ppds pppd python qt3 quicktime readline real reflection samba sdk sdl session skey smime spell spl sse sse2 ssl stats svg tcltk tcpd tetex theora threads tiff truetype truetype-fonts type1 type1-fonts udev unicode usb userland_GNU utf8 video_cards_fbdev video_cards_i810 video_cards_vesa video_cards_vga vim-with-x vorbis wifi win32codecs wmf wxgtk1 wxwindows xanim xcomposite xine xml xmms xorg xv xvid yv12 zlib"
Unset:  CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, LDFLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Comment 6 Carsten Lohrke (RETIRED) gentoo-dev 2007-04-15 23:35:59 UTC 
Yes works fine here as well. Sorry that it tooke me so lang to come back to you.