/usr/portage/sys-libs/pam/files/digest-pam-0.78-r5 does not exist hostname files # emerge system Calculating system dependencies ...done! >>> emerge (1 of 19) sys-libs/pam-0.78-r3 to / !!! Files listed in the manifest do not exist! files/digest-pam-0.78-r5 pam-0.78-r5.ebuild
Looks fine here, please emerge sync again.