Gentoo Websites Logo
Go to: Gentoo Home Documentation Forums Lists Bugs Planet Store Wiki Get Gentoo!
Bug 123333 - sci-biology/cutg-150 should be stabilised
Summary: sci-biology/cutg-150 should be stabilised
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: High normal
Assignee: Olivier Fisette (RETIRED)
URL:
Whiteboard:
Keywords:
Depends on: 123332
Blocks:
  Show dependency tree
 
Reported: 2006-02-18 18:25 UTC by Olivier Fisette (RETIRED)
Modified: 2006-04-08 03:32 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---

Attachments
Add an attachment (proposed patch, testcase, etc.)

Note You need to log in before you can comment on or make changes to this bug.
Description Olivier Fisette (RETIRED) gentoo-dev 2006-02-18 18:25:22 UTC 
I would like all supporting arches to please stabilise   
sci-biology/cutg-150. Here is a (small) test case using EMBOSS:  
 
$ wget pelican.rsvs.ulaval.ca/distfiles/seq/Zostera-Zymobacter-ref.codcmp 
$ codcmp EZostera_marina.cut EZymobacter_palmae.cut Zostera-Zymobacter.codcmp 
$ diff -u Zostera-Zymobacter-ref.codcmp Zostera-Zymobacter.codcmp 
 
There should be no difference between the two files. For ppc-macos, emboss-3.0.0-r1 is required (and must be stabilised first), as it has the fix for case-insensitive filesystems.
 
Thanks in advance,
Comment 1 Joshua Jackson (RETIRED) gentoo-dev 2006-02-20 17:17:48 UTC 
Stable on x86
Comment 2 Markus Rothe (RETIRED) gentoo-dev 2006-02-21 02:45:14 UTC 
stable on ppc64
Comment 3 nixnut (RETIRED) gentoo-dev 2006-02-22 11:33:47 UTC 
Stable on ppc
Comment 4 Fabian Groffen gentoo-dev 2006-02-22 13:21:03 UTC 
ppc-macos stable, thanks!
Comment 5 Olivier Fisette (RETIRED) gentoo-dev 2006-03-14 18:58:25 UTC 
amd64, could you have a look at this please? (Last arch to stabilise.)
Comment 6 Simon Stelling (RETIRED) gentoo-dev 2006-04-08 03:32:33 UTC 
we're finally done here, sorry for the delay