Bug 118831 – sci-biology/prosite-19.16 should be stabilised

• Status: RESOLVED FIXED
• Product: Gentoo Linux

[Description Olivier Fisette (RETIRED) 2006-01-12 18:46:12 UTC]

I would like all supporting arches to please stabilise 
sci-biology/prosite-19.16. Here is a (small) test case using EMBOSS:  
   
$ wget pelican.rsvs.ulaval.ca/distfiles/seq/phikz-orf144.pep   
$ wget pelican.rsvs.ulaval.ca/distfiles/seq/phikz-orf144-ref.patmatmotifs   
$ patmatmotifs -full phikz-orf144.pep phikz-orf144.patmatmotifs   
$ diff -u phikz-orf144-ref.patmatmotifs phikz-orf144.patmatmotifs   
   
The only difference should be the timestamp of the report.   
   
Thanks in advance,

[Comment 1 Patrick McLean 2006-01-12 20:33:22 UTC]

Works fine on amd64.

Portage 2.1_pre3-r1 (default-linux/amd64/2005.1, gcc-3.4.5, glibc-2.3.6-r2,
2.6.15-gentoo x86_64)
=================================================================
System uname: 2.6.15-gentoo x86_64 AMD Athlon(tm) 64 Processor 3400+
Gentoo Base System version 1.12.0_pre13
dev-lang/python:     2.4.2
sys-apps/sandbox:    1.2.17
sys-devel/autoconf:  2.13, 2.59-r7
sys-devel/automake:  1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r1
sys-devel/binutils:  2.16.1-r1
sys-devel/libtool:   1.5.22
virtual/os-headers:  2.6.11-r3
ACCEPT_KEYWORDS="amd64 ~amd64"
AUTOCLEAN="yes"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=athlon64 -O3 -fomit-frame-pointer -ffast-math -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/kde/2/share/config /usr/kde/3/share/config
/usr/lib64/mozilla/defaults/pref /usr/share/X11/xkb /usr/share/config
/var/qmail/control"
CONFIG_PROTECT_MASK="/etc/gconf /etc/terminfo /etc/texmf/web2c /etc/env.d"
CXXFLAGS="-march=athlon64 -O3 -fomit-frame-pointer -ffast-math -pipe"
DISTDIR="/usr/portage/distfiles"
FEATURES="autoconfig distlocks multilib-strict sandbox sfperms strict"
GENTOO_MIRRORS="ftp://cs.ubishops.ca/pub/gentoo ftp://gentoo.risq.qc.ca
http://gentoo.oregonstate.edu http://distfiles.gentoo.org"
LDFLAGS="-Wl,-O1"
MAKEOPTS="-j2"
PKGDIR="/usr/portage/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/usr/local/portage /usr/local/mod-x"
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="amd64 X a52 aac aalib alsa audiofile avi bash-completion berkdb
bitmap-fonts bmp bzip2 c++ cairo caps cdparanoia cdr crypt cscope css cups curl
dbus doc dri dts dv dvd dvdr dvdread dvi edl eds emboss encode esd ethereal evo
exif expat fam fat ffmpeg fftw flac foomaticdb fortran gb gcj gd gdbm gif gimp
gimpprint glitz glut gmail gmp gnome gnutls gphoto2 gpm gstreamer gtk gtk2
guile gzip hal hfs howl idea idn ieee1394 imagemagick imap imlib imlib2
iproute2 jabber java jfs jpeg junit lcms libcaca libgda libwww linuxkeys live
lzo lzw lzw-tiff mad matroska mikmod mmap mng mod mono mozdevelop mozilla
mozsvg mp3 mpeg mplayer msn mythtv native nautilus ncurses network nfs nls
no-old-linux no_wxgtk1 noantlr nob nobcel nobeanutils nobsh nocommonslogging
nocommonsnet nojsch nolog4j nomotif noplugin norhino noxalan noxerces nptl
nptlonly offensive ogg oggvorbis openal opengl pam pcre pda pdflib perl plugin
png python quicktime radeon readline real reiserfs rtc ruby samba sdl slang
sndfile speex spell sqlite ssl stream subversion svg tcltk tcpd tetex tga
theora tiff transcode truetype truetype-fonts type1-fonts udev unicode usb
userlocales v4l v4l2 vcd vorbis wmf wxwindows xanim xine xml2 xpm xprint
xscreensaver xv xvid xvmc zlib elibc_glibc kernel_linux userland_GNU"
Unset:  ASFLAGS, CTARGET, LANG, LC_ALL, LINGUAS

[Comment 2 Tobias Scherbaum (RETIRED) 2006-01-14 00:50:10 UTC]

ppc stable, thanks for providing the test case :)

[Comment 3 Fabian Groffen 2006-01-14 01:32:59 UTC]

ppc-macos done

[Comment 4 Marcus D. Hanwell (RETIRED) 2006-01-14 18:50:36 UTC]

Stable on amd64.

[Comment 5 Markus Rothe (RETIRED) 2006-01-18 13:27:03 UTC]

sorry for being late... ppc64 stable now.