Hi biopython is a collection of python modules for computational molecular biology (as a complement to bioperl). Homepage is at www.biopython.org I haven't found an ebuild for it so I wrote one quickly - It's pretty straightforward! it depends on dev-python/Numeric /ReportLab /egenix-mx-base Thanks Dan
Created attachment 6220 [details] biopython ebuild
Created attachment 6221 [details] biopython ebuild Doh - forgot to comment out the "setup.py test" line. This produces a graphical windows with some installation test results and probably isn't suitable for inclusion in an ebuild in its current form.
Created attachment 6332 [details] biopython ebuild with test step GUI disabled Uncommented the test line with the addition of a flag to prevent the graphical display of the test results.
Hi Daniel Thank you for your submission! Unfortunately you did not give the full name of the ebuild (specifically - you are missing the PV part) and I cannot guess version number from anything you included. Without this information the ebuild is not functional. Could you please fix that? George
Created attachment 7129 [details] biopython-1.10.ebuild Sorry about that. The version number is 1.10. Hope that's all the information you need?! Daniel
Hi Daniel. Thanks for the update. I have processed the ebuild and committed it. PLease test. (Please close the bug with RESOLVE/FIXED upon sccessful testing, or reopen otherwise). BTW, setup.py would not recognise --no-gui option, therefore I disabled tests. George
