Bug 115442 – sci-biology/clustalx-1.83-r2 should be stabilised

• Status: RESOLVED FIXED
• Product: Gentoo Linux

[Description Olivier Fisette (RETIRED) 2005-12-13 11:41:53 UTC]

I would like all supporting arches to please stabilise   
sci-biology/clustalx-1.83-r2. r1 is already stable on x86, and r2 is only a  
small bugfix revision. No version is stable on amd64 at the moment. Here are  
testing instructions:  
  
$ wget pelican.rsvs.ulaval.ca/distfiles/seq/glxrs.fasta  
$ clustalx  
File > Load Sequences  
Select glxrs.fata, then OK  
The protein sequences should appear in the GUI.  
Alignment > Do Complete Alignment  
After a while, the GUI will be updated with the aligned sequences.  
  
If these steps completed without error, the program works fine. 
 
Thanks in advance,

[Comment 1 Olivier Fisette (RETIRED) 2005-12-13 14:59:48 UTC]

This is not related to the stabilisation of ClustalX. Stable versions of the 
NCBI toolkit are available for both arches. There might be a bug in that 
package, but it does not stop ClustalX 1.83-r2 from working perfectly on amd64 
and x86. 

[Comment 2 Lares Moreau 2005-12-13 18:03:14 UTC]

Works fine here.

[Comment 3 Joshua Jackson (RETIRED) 2005-12-14 19:28:27 UTC]

Stable on x86

[Comment 4 Simon Stelling (RETIRED) 2005-12-23 13:23:46 UTC]

stable on amd64