x86_64-pc-linux-gnu-gcc -pie -Wl,-O1 \ -Wl,-dynamic-linker=/lib/ld-linux.so.2 -Wl,-z,relro -Wl,-z,now \ -B/var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/csu/ \ \ \ -L/var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads -L/var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/math -L/var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/elf -L/var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/dlfcn -L/var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nss -L/var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nis -L/var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/rt -L/var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/resolv -L/var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/crypt -L/var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/linuxthreads -Wl,-rpath-link=/var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads:/var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/math:/var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/elf:/var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/dlfcn:/var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nss:/var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nis:/var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/rt:/var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/resolv:/var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/crypt:/var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/linuxthreads \ -o /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nscd/nscd /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nscd/nscd.o /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nscd/connections.o /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nscd/pwdcache.o /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nscd/getpwnam_r.o /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nscd/getpwuid_r.o /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nscd/grpcache.o /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nscd/getgrnam_r.o /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nscd/getgrgid_r.o /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nscd/hstcache.o /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nscd/gethstbyad_r.o /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nscd/gethstbynm2_r.o /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nscd/dbg_log.o /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nscd/nscd_conf.o /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nscd/nscd_stat.o /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nscd/cache.o /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nscd/mem.o /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nscd/nscd_setup_thread.o /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nscd/xmalloc.o /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nscd/xstrdup.o /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nscd/aicache.o /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nscd/initgrcache.o /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nscd/gai.o /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/rt/librt.so /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/linuxthreads/libpthread_nonshared.a /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/linuxthreads/libpthread.so /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nis/libnsl.so /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/libc_nonshared.a /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/linuxthreads/libpthread.so: undefined reference to `__libc_malloc_pthread_startup@GLIBC_PRIVATE' /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/linuxthreads/libpthread.so: undefined reference to `_errno@GLIBC_2.0' /var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/linuxthreads/libpthread.so: undefined reference to `_h_errno@GLIBC_2.0' collect2: ld returned 1 exit status make[2]: *** [/var/tmp/portage/glibc-2.3.5-r1/work/build-x86-x86_64-pc-linux-gnu-linuxthreads/nscd/nscd] Error 1 make[2]: Leaving directory `/var/tmp/portage/glibc-2.3.5-r1/work/glibc-2.3.5/nscd' make[1]: *** [nscd/others] Error 2 make[1]: Leaving directory `/var/tmp/portage/glibc-2.3.5-r1/work/glibc-2.3.5' make: *** [all] Error 2 !!! ERROR: sys-libs/glibc-2.3.5-r1 failed. !!! Function toolchain-glibc_src_compile, Line 226, Exitcode 2 !!! (no error message) !!! If you need support, post the topmost build error, NOT this status message. Reproducible: Always Steps to Reproduce: 1. emerge -uD system Actual Results: emerge failed Expected Results: new glibc Portage 2.0.51.22-r2 (default-linux/amd64/2005.0, gcc-3.4.4, glibc-2.3.5-r0, 2.6.12-gentoo-r6 x86_64) ================================================================= System uname: 2.6.12-gentoo-r6 x86_64 AMD Athlon(tm) 64 Processor 3000+ Gentoo Base System version 1.6.13 distcc 2.18.3 x86_64-pc-linux-gnu (protocols 1 and 2) (default port 3632) [disabled] dev-lang/python: 2.3.5 sys-apps/sandbox: 1.2.12 sys-devel/autoconf: 2.13, 2.59-r6 sys-devel/automake: 1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.5 sys-devel/binutils: 2.15.92.0.2-r10 sys-devel/libtool: 1.5.18-r1 virtual/os-headers: 2.6.11-r2 ACCEPT_KEYWORDS="amd64" AUTOCLEAN="yes" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-O2 -march=k8 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/kde/2/share/config /usr/kde/3.3/env /usr/kde/3.3/share/config /usr/kde/3.3/shutdown /usr/kde/3.4/env /usr/kde/3.4/share/config /usr/kde/3.4/shutdown /usr/kde/3/share/config /usr/lib/X11/xkb /usr/lib64/mozilla/defaults/pref /usr/share/config /var/qmail/control" CONFIG_PROTECT_MASK="/etc/gconf /etc/terminfo /etc/env.d" CXXFLAGS="-O2 -march=k8 -pipe" DISTDIR="/usr/portage/distfiles" FEATURES="autoconfig distlocks sandbox sfperms strict" GENTOO_MIRRORS="http://gentoo.mirrors.easynews.com/linux/gentoo/ http://mirror.phy.olemiss.edu/mirror/gentoo ftp://gentoo.mirrors.tds.net/gentoo http://gentoo.zie.pg.gda.pl http://ftp.belnet.be/mirror/rsync.gentoo.org/gentoo/" MAKEOPTS="-j2" PKGDIR="/usr/portage/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/usr/local/portage" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="amd64 3dnowex X aac acl acpi alsa apache2 arts artswrappersuid avi berkdb bidi bitmap-fonts bonobo browserplugin bzip2 bzlib calendar canna caps cdparanoia cdr cjk crypt cups curl curlwrappers dba dga doc dts dv dvb dvd dvdr dvdread eds encode esd ethereal evo fam fbcon ffmpeg flac foomaticdb fortran ftp gd gdbm gif gmp gnome gnutls gpm gstreamer gtk gtk2 gtkhtml i8x0 iconv imagemagick imap imlib innodb interbase ipv6 java jpeg jpeg2k junit kde kdeenablefinal lcms ldap libwww lm_sensors lzw lzw-tiff mad maildir mailwrapper mbox mcal mhash mime mmap mng motif mozdevelop mozilla mozsvg mp3 mpeg mpm-prefork mppe-mppc mysql nas ncurses nls nptl nvidia oav odbc offensive ogg oggvorbis openal opengl oss pam pcntl pcre pda pdflib perl php pic plotutils png posix postgres ppds prelude profile python qt quicktime rdesktop readline samba sasl scanner sdl session shared sharedmem slang sndfile soap sockets sox speex spell spl sqlite ssl svg symlink tcltk tcpd theora threads tidy tiff tokenizer truetype truetype-fonts type1-fonts unicode usb userlocales utf8 vhosts vorbis wddx wifi win32 wmf xine xml xml2 xmlrpc xmms xpm xprint xsl xv xvid yahoo zlib userland_GNU kernel_linux elibc_glibc" Unset: ASFLAGS, CTARGET, LANG, LC_ALL, LDFLAGS, LINGUAS
Was this during an upgrade from 2004.3 or were you already on 2005.0? Can you try this in /etc/make.conf: CFLAGS_x86="-m32"
I am already on 2005.0. In fact, I couldn't for the life of me fix the 32 bit support after I did the upgrade from 2004.3 to 2005.0, so I used a chrooted 2005.0 clean install to redo my system.
After setting 'CFLAGS_x86="-m32"' glibc compiled without problems.
Ok, that means you've got some leftover libc.so or something in /emul which is causing problems. Please attach the output of: find /emul -type f
Created attachment 66306 [details] 'find /emul -type f' command output
Yeah, you've got /emul/linux/x86/usr/lib/libpthread.so which means portage didn't unmerge it when it was supposed to... odd... please delete that file.
(In reply to comment #6) > Yeah, you've got /emul/linux/x86/usr/lib/libpthread.so which means portage > didn't unmerge it when it was supposed to... odd... please delete that file. Have the exact same problem, but removing this file has not the desired effect, the bug persists. The added flag makes glibc compile (CFLAGS_x86="-m32) -- Portage 2.0.51.22-r2 (default-linux/amd64/2005.0, gcc-3.4.4, glibc-2.3.5-r1, 2.6.12-gentoo-r8 x86_64) ================================================================= System uname: 2.6.12-gentoo-r8 x86_64 AMD Athlon(tm) 64 Processor 3000+ Gentoo Base System version 1.12.0_pre6 distcc 2.18.3 x86_64-pc-linux-gnu (protocols 1 and 2) (default port 3632) [disabled] dev-lang/python: 2.3.5, 2.4.1-r1 sys-apps/sandbox: 1.2.12 sys-devel/autoconf: 2.13, 2.59-r7 sys-devel/automake: 1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6 sys-devel/binutils: 2.16.1 sys-devel/libtool: 1.5.18-r1 virtual/os-headers: 2.6.11-r2 ACCEPT_KEYWORDS="amd64 ~amd64" AUTOCLEAN="yes" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-O3 -fweb -fforce-addr -march=athlon64 -fomit-frame-pointer -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/kde/2/share/config /usr/kde/3/share/config /usr/share/config /var/qmail/control" CONFIG_PROTECT_MASK="/etc/gconf /etc/env.d" CXXFLAGS="-O3 -fweb -fforce-addr -march=athlon64 -fomit-frame-pointer -pipe" DISTDIR="/usr/portage/distfiles" FEATURES="autoconfig ccache distlocks fixpackages sfperms strict" GENTOO_MIRRORS="ftp://ftp.student.utwente.nl/pub/linux/gentoo http://gentoo.oregonstate.edu http://www.ibiblio.org/pub/Linux/distributions/gentoo" LINGUAS="nl" MAKEOPTS="-j2" PKGDIR="/usr/portage/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/usr/local/portage" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="amd64 X aalib alsa applypatches arts avi berkdb bitmap-fonts bonobo cdr crypt cups curl dba dga dvd dvdread eds encode esd fam flac foomaticdb fortran gd gdbm ggi gif glx gnome gphoto2 gpm gstreamer gtk gtk2 gtkhtml guile imagemagick imlib ipv6 jack java joystick jpeg junit kde kdepim ldap libwww lzw lzw-tiff mad mikmod motif mozilla mp3 mpeg mysql nas ncurses nls nojython ogg opengl pam pdflib perl png ppds python qt quicktime readline samba scanner sdl session simplexml snmp speex spell ssl svg tcltk tcpd tetex tiff truetype truetype-fonts type1-fonts usb userlocales vorbis xft xine xml xml2 xmms xpm xv zlib zvbi linguas_nl userland_GNU kernel_linux elibc_glibc" Unset: ASFLAGS, CTARGET, LANG, LC_ALL, LDFLAGS
Created attachment 66446 [details] Output of find /emul -type f > /tmp/out See above comment
Yeah Edwin, you've got a bunch of other emul-glibc files there... see /emul/linux/x86/lib/libc-2.3.5.so, etc... Why are those there? Is /lib or /lib32 a symlink to /emul/...? How did you upgrade? Did you unmerge emul-glibc at the end of the upgrade?
(In reply to comment #9) > Yeah Edwin, you've got a bunch of other emul-glibc files there... see /emul/linux/x86/lib/libc-2.3.5.so, > etc... Yes, it seemed obvious to me that these might be the problem. > Why are those there? Is /lib or /lib32 a symlink to /emul/...? How did you upgrade? Did you unmerge > emul-glibc at the end of the upgrade? I upgraded only yesterday to 2005.0. This error existed right from the start when I did the normal (scripted) upgrade. However, for reasons in other packages, the -fpic flag was in make.conf. Trying to eliminate the problem I started the upgrade process again, now without the helper script. However, it might be the case that I accidently synced (and updated) against the 2005.0 repository. That might be the reason, as app-emulation/emul-linux-x86-glibc is at version 1000 right now (Latest version available: 1000). In any case, what would be the correct way of tackling this problem?
