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Bug 507492 - dev-perl/PDL-2.4.3-r1 - xsubpp: Could not find a typemap for C type 'PDL_Long *'
Summary: dev-perl/PDL-2.4.3-r1 - xsubpp: Could not find a typemap for C type 'PDL_Long *'
Status: RESOLVED DUPLICATE of bug 496422
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: [OLD] Development (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Gentoo Science Related Packages
URL:
Whiteboard:
Keywords:
: 514158 (view as bug list)
Depends on:
Blocks:
 
Reported: 2014-04-12 10:42 UTC by Martin Mokrejš
Modified: 2014-08-28 15:53 UTC (History)
2 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
build.log (build.log,16.67 KB, text/plain)
2014-04-12 10:42 UTC, Martin Mokrejš
Details

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Description Martin Mokrejš 2014-04-12 10:42:43 UTC
Created attachment 374804 [details]
build.log

/usr/bin/perl5.16.3 "-I../../blib/arch" "-I../../blib/lib" Core.xs.PL Core.xs
defined(%hash) is deprecated at ../../blib/lib/PDL/Core/Dev.pm line 116.
        (Maybe you should just omit the defined()?)
Extracting Core.xs (NO bad value support)
/usr/bin/perl5.16.3 -I../../blib/arch -I../../blib/lib -I/usr/lib64/perl5/5.16.3/x86_64-linux -I/usr/lib64/perl5/5.16.3 Core.xs.PL Core.xs
defined(%hash) is deprecated at ../../blib/lib/PDL/Core/Dev.pm line 116.
        (Maybe you should just omit the defined()?)
Extracting Core.xs (NO bad value support)
/usr/bin/perl5.16.3 /usr/lib64/perl5/vendor_perl/5.16.3/ExtUtils/xsubpp  -typemap /usr/lib64/perl5/5.16.3/ExtUtils/typemap -typemap typemap Core.xs > Core.xsc && mv Core.xsc Core.c
Could not find a typemap for C type 'PDL_Long *'.
The following C types are mapped by the current typemap:
'AV *', 'Boolean', 'CV *', 'FILE *', 'FileHandle', 'HV *', 'I16', 'I32', 'I8', 'IV', 'InOutStream', 'InputStream', 'Logical', 'NV', 'OutputStream', 'PerlIO *', 'Result', 'STRLEN', 'SV *', 'SVREF', 'SysRet', 'SysRetLong', 'Time_t *', 'U16', 'U32', 'U8', 'UV', 'bool', 'bool_t', 'caddr_t', 'char', 'char *', 'char **', 'const char *', 'double', 'float', 'int', 'long', 'pdl *', 'pdl_trans *', 'short', 'size_t', 'ssize_t', 'time_t', 'unsigned', 'unsigned char', 'unsigned char *', 'unsigned int', 'unsigned long', 'unsigned long *', 'unsigned short', 'void *', 'wchar_t', 'wchar_t *'
 in Core.xs, line 919
make[2]: *** [Core.o] Error 1
make[2]: Leaving directory `/var/tmp/portage/dev-perl/PDL-2.4.3-r1/work/PDL-2.4.3/Basic/Core'



I will attach full debug.log.



# emerge --info =dev-perl/PDL-2.4.3-r1::gentoo
WARNING: One or more repositories have missing repo_name entries:

        /var/lib/layman/profiles/repo_name
        /scratch/usr/local/portage/profiles/repo_name

NOTE: Each repo_name entry should be a plain text file containing a
unique name for the repository on the first line.


Portage 2.2.8-r1 (default/linux/amd64/13.0, gcc-4.8.2, glibc-2.17, 3.2.57 x86_64)
=================================================================
                        System Settings
=================================================================
System uname: Linux-3.2.57-x86_64-Intel-R-_Xeon-R-_CPU_X5680_@_3.33GHz-with-gentoo-2.2
KiB Mem:   148616304 total, 138250016 free
KiB Swap:  805314316 total, 805314316 free
Timestamp of tree: Sat, 12 Apr 2014 07:30:01 +0000
ld GNU ld (GNU Binutils) 2.23.2
distcc 3.1 x86_64-pc-linux-gnu [disabled]
app-shells/bash:          4.2_p45
dev-java/java-config:     2.2.0
dev-lang/python:          2.7.5-r3, 3.2.5-r3, 3.3.3
dev-util/cmake:           2.8.12.2
dev-util/pkgconfig:       0.28
sys-apps/baselayout:      2.2
sys-apps/openrc:          0.12.4
sys-apps/sandbox:         2.6-r1
sys-devel/autoconf:       2.13, 2.69
sys-devel/automake:       1.9.6-r3, 1.11.1-r1, 1.13.4
sys-devel/binutils:       2.23.2
sys-devel/gcc:            4.1.2, 4.2.4-r1, 4.3.6-r1, 4.4.7, 4.5.4, 4.7.3-r1, 4.8.2
sys-devel/gcc-config:     1.7.3
sys-devel/libtool:        2.4.2
sys-devel/make:           3.82-r4
sys-kernel/linux-headers: 3.9 (virtual/os-headers)
sys-libs/glibc:           2.17
Repositories: gentoo science x-portage x-layman
ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="* -@EULA dlj-1.1 sun-bcla-java-vm PUEL Oracle-BCLA-JavaSE"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O1 -pipe -fno-strict-aliasing -march=native -mpclmul -mpopcnt"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt /var/lib/hsqldb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.5/ext-active/ /etc/php/cgi-php5.5/ext-active/ /etc/php/cli-php5.5/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-O1 -pipe -fno-strict-aliasing -march=native -mpclmul -mpopcnt"
DISTDIR="/scratch/usr/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news nostrip parallel-fetch preserve-libs protect-owned sandbox sfperms splitdebug strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j13"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/scratch/usr/portage"
PORTDIR_OVERLAY="/var/lib/layman/science /scratch/usr/local/portage /var/lib/layman"
USE="X amd64 apache2 apng berkdb bzip2 cgi cli cracklib crypt cups cxx dbus dlz expat fontconfig fortran gd gdbm gnutls hal iconv innodb introspection java jce jpeg jpg laptop mmx modules mpi mpich2 multilib mysql ncurses nfs nls nptl nptlonly nsplugin opengl openmp openssl pam pcre perl png python qt3support qt4 readline server session sse sse2 sse4_1 sse4_2 ssl ssse3 static-libs suexec svg syslog tcl tcpd threads tiff truetype udev unicode usb xml zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="actions alias auth_basic auth_digest authn_anon authn_dbd authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dbd deflate dir disk_cache env expires ext_filter file_cache filter headers icu ident imagemap include info log_config mem_cache mime mime_magic rewrite setenvif speling status unique_id userdir usertrack vhost_alias negotiation" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="en cs cz" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3" RUBY_TARGETS="ruby19 ruby20" USERLAND="GNU" VIDEO_CARDS="vesa matrox" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, SYNC, USE_PYTHON
Comment 1 Rafał Mużyło 2014-04-12 14:21:35 UTC
This is likely a stable request - do check, but certain entries in Changes suggest, that this is fixed even in 2.4.7.
Comment 2 Justin Lecher (RETIRED) gentoo-dev 2014-04-24 14:12:53 UTC
Could you please confirm that this is fixed in 2.4.11?
Comment 3 Martin Mokrejš 2014-04-24 17:05:23 UTC
OK, works but these will need stabilization too:

#
=dev-perl/PDL-2.4.11 ~amd64

# required by dev-perl/PDL-2.4.11
# required by dev-perl/PDL (argument)
=dev-perl/File-Map-0.560.0 ~amd64
# required by dev-perl/File-Map-0.560.0
# required by dev-perl/PDL-2.4.11
# required by dev-perl/PDL (argument)
=dev-perl/Const-Fast-0.13.0 ~amd64
# required by dev-perl/File-Map-0.560.0
# required by dev-perl/PDL-2.4.11
# required by dev-perl/PDL (argument)
=dev-perl/Sub-Exporter-Progressive-0.1.11 ~amd64
# required by dev-perl/PDL-2.4.11
# required by dev-perl/PDL (argument)
=dev-perl/OpenGL-0.670.0 ~amd64
Comment 4 Mikle Kolyada (RETIRED) archtester Gentoo Infrastructure gentoo-dev Security 2014-06-21 14:46:43 UTC
*** Bug 514158 has been marked as a duplicate of this bug. ***
Comment 5 Mikle Kolyada (RETIRED) archtester Gentoo Infrastructure gentoo-dev Security 2014-08-28 15:53:53 UTC

*** This bug has been marked as a duplicate of bug 496422 ***