current stable sci-libs/blas-atlas-3.6.0-r1 fails to build with GCC 4.1. if possible, please stabilize >=sci-libs/blas-atlas-3.7.11 or backport the eclass fix from ~arch so we can work on getting GCC 4.1 into stable. thanks ;d
Any progress on this? We need this ASAP for bug #140707. If no response is made before Sept 1st we'll be taking it upon ourselves to CC archs and get this bug resolved. thanks :)
I'm currently testing bug 141446 which needs this for gcc-4.1, so I went ahead and tested blas-atlas-3.7.11 on amd64... emerges fine, following QA notices: QA Notice: pre-stripped files found: /var/tmp/portage/blas-atlas-3.7.11/image/usr/lib64/blas/atlas/libblas.so.0.0.0 /var/tmp/portage/blas-atlas-3.7.11/image/usr/lib64/blas/atlas/libcblas.so.0.0.0 /var/tmp/portage/blas-atlas-3.7.11/image/usr/lib64/libatlas.so.0.0.0 QA Notice: the following files contain executable stacks Files with executable stacks will not work properly (or at all!) on some architectures/operating systems. A bug should be filed at http://bugs.gentoo.org/ to make sure the file is fixed. For more information, see http://hardened.gentoo.org/gnu-stack.xml Please include this file in your report: /var/tmp/portage/blas-atlas-3.7.11/temp/scanelf-execstack.log "RWX --- --- usr/lib64/libatlas.so.0.0.0" emerge --info Portage 2.1-r2 (default-linux/amd64/2006.1/desktop, gcc-4.1.1, glibc-2.4-r3, 2.6.17-suspend2-r4Dudebox-Edition x86_64) ================================================================= System uname: 2.6.17-suspend2-r4Dudebox-Edition x86_64 AMD Athlon(tm) 64 Processor 3200+ Gentoo Base System version 1.12.4 ccache version 2.3 [enabled] app-admin/eselect-compiler: [Not Present] dev-lang/python: 2.4.3-r1 dev-python/pycrypto: 2.0.1-r5 dev-util/ccache: 2.3 dev-util/confcache: [Not Present] sys-apps/sandbox: 1.2.17 sys-devel/autoconf: 2.13, 2.59-r7 sys-devel/automake: 1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2 sys-devel/binutils: 2.16.1-r3 sys-devel/gcc-config: 1.3.13-r3 sys-devel/libtool: 1.5.22 virtual/os-headers: 2.6.11-r2 ACCEPT_KEYWORDS="amd64" AUTOCLEAN="yes" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=k8 -msse3 -Os -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/share/X11/xkb /usr/share/config" CONFIG_PROTECT_MASK="/etc/env.d /etc/gconf /etc/terminfo" CXXFLAGS="-march=k8 -msse3 -Os -pipe" DISTDIR="/usr/portage/distfiles" FEATURES="autoconfig ccache collision-protect distlocks metadata-transfer multilib-strict parallel-fetch sandbox sfperms strict test userfetch userpriv usersandbox" GENTOO_MIRRORS="ftp://ftp.wh2.tu-dresden.de/pub/mirrors/gentoo ftp://linux.rz.ruhr-uni-bochum.de/gentoo-mirror/ ftp:///ftp-stud.fht-esslingen.de/pub/Mirrors/gentoo/" LDFLAGS="-Wl,-O1" MAKEOPTS="-j2" PKGDIR="/usr/portage/packages" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --delete-after --stats --timeout=180 --exclude='/distfiles' --exclude='/local' --exclude='/packages'" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" SYNC="rsync://server/gentoo-portage" USE="amd64 X alsa arts avi berkdb bitmap-fonts cairo cdr cli crypt cups dbus dlloader dri dvd dvdr eds emboss encode esd fam firefox fortran gdbm gif gnome gpm gstreamer gtk gtk2 hal isdnlog jpeg kde kdeenablefinal kdehiddenvisibility ldap libg++ mad mikmod mp3 mpeg ncurses nls nptl nptlonly ogg opengl oss pam pcre pdflib perl png ppds pppd python qt3 qt4 quicktime readline reflection sdl session spell spl ssl tcpd test truetype truetype-fonts type1-fonts udev unicode vorbis xml xorg xv zlib elibc_glibc input_devices_keyboard input_devices_mouse kernel_linux userland_GNU video_cards_radeon" Unset: CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, LINGUAS, PORTAGE_RSYNC_EXTRA_OPTS, PORTDIR_OVERLAY
(In reply to comment #1) > Any progress on this? We need this ASAP for bug #140707. If no response is > made before Sept 1st we'll be taking it upon ourselves to CC archs and get this > bug resolved. > > thanks :) > Hi Ryan, blas-atlas-3.7.11 is ready to go stable from my point of view. As a matter of fact, it should go stable soon since it has much better support for modern CPUs that 3.6.0 does. However, there are still a few open bugs for this package. Many of them are due to the fact that blas-atlas is a very complex scientific-library that does compile time profiling, timing, and assembly code generation. Hence builds can even break if blas-atlas is being emerged on a system with a very unbalanced load etc. The compile time assembly code generation also leads to the executable stack in libatlas.so. I plan to track this down at some point. Thanks, Markus
(In reply to comment #3) > blas-atlas-3.7.11 is ready to go stable from my point of view. As a matter > of fact, it should go stable soon since it has much better support for > modern CPUs that 3.6.0 does. CCing arches then.
ppc64 stable
Marked stable on amd64 assuming the concerns raised in comment 2 are going to be fixed later on.
1) emerges fine so far a) QA Notice: pre-stripped files found: /var/tmp/portage/blas-atlas-3.7.11/image/usr/lib/blas/atlas/libcblas.so.0.0.0 /var/tmp/portage/blas-atlas-3.7.11/image/usr/lib/blas/atlas/libblas.so.0.0.0 /var/tmp/portage/blas-atlas-3.7.11/image/usr/lib/libatlas.so.0.0.0 b) QA Notice: the following files contain executable stacks Files with executable stacks will not work properly (or at all!) on some architectures/operating systems. A bug should be filed at http://bugs.gentoo.org/ to make sure the file is fixed. For more information, see http://hardened.gentoo.org/gnu-stack.xml Please include this file in your report: /var/tmp/portage/blas-atlas-3.7.11/temp/scanelf-execstack.log "RWX --- --- usr/lib/libatlas.so.0.0.0" 2) passes collision test 3) passes test suite (no official, but something in between) Portage 2.1-r2 (default-linux/x86/2006.1/desktop, gcc-4.1.1, glibc-2.4-r3, 2.6.17-gentoo-r7 i686) ================================================================= System uname: 2.6.17-gentoo-r7 i686 AMD Athlon(tm) XP 2500+ Gentoo Base System version 1.12.4 app-admin/eselect-compiler: [Not Present] dev-lang/python: 2.4.3-r1 dev-python/pycrypto: 2.0.1-r5 dev-util/ccache: [Not Present] dev-util/confcache: [Not Present] sys-apps/sandbox: 1.2.17 sys-devel/autoconf: 2.13, 2.59-r7 sys-devel/automake: 1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2 sys-devel/binutils: 2.16.1-r3 sys-devel/gcc-config: 1.3.13-r3 sys-devel/libtool: 1.5.22 virtual/os-headers: 2.6.11-r2 ACCEPT_KEYWORDS="x86" AUTOCLEAN="yes" CBUILD="i686-pc-linux-gnu" CFLAGS="-O2" CHOST="i686-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/X11/xkb" CONFIG_PROTECT_MASK="/etc/env.d /etc/gconf /etc/revdep-rebuild /etc/splash /etc/terminfo" CXXFLAGS="-O2" DISTDIR="/usr/portage/distfiles" FEATURES="autoconfig ccache collision-protect distlocks metadata-transfer parallel-fetch sandbox sfperms strict test" GENTOO_MIRRORS="ftp://sunsite.informatik.rwth-aachen.de/pub/Linux/gentoo/" LANG="de_DE@euro" LC_ALL="de_DE@euro" LINGUAS="de" MAKEOPTS="-j2" PKGDIR="/usr/portage/packages" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --delete-after --stats --timeout=180 --exclude='/distfiles' --exclude='/local' --exclude='/packages'" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/usr/local/portage" SYNC="rsync://rsync.informatik.rwth-aachen.de/gentoo-portage" USE="x86 3dnow 3dnowext X Xaw3d a52 alsa arts artworkextra asf audiofile avi bash-completion beagle berkdb bidi bitmap-fonts bootsplash branding bzip2 cairo cdda cddb cdparanoia cdr cli cracklib crypt css cups curl custom-cflags dbus dga directfb divx4linux dlloader dri dts dvd dvdr dvdread dvi eds emacs emboss encode esd evo exif expat fam fat fbcon ffmpeg firefox fortran ftp gb gcj gdbm gif gnome gpm gstreamer gtk gtk2 gtkhtml hal icq idn imagemagick imap ipv6 isdnlog java javascript jikes jpeg jpeg2k ldap leim libg++ lm_sensors mad maildir matroska mbox mikmod mime mmx mmxext mng mono mp3 mpeg mpeg2 mule nautilus ncurses nforce2 nls nocardbus nptl nptlonly nsplugin nvidia objc ogg opengl pam pcre pdf pdflib perl plotutils pmu png ppds pppd preview-latex print python qt3 qt4 quicktime readline reflection reiserfs samba sdk session slang spell spl sse ssl svg svga t1lib tcltk tcpd tetex theora thunderbird tiff truetype truetype-fonts type1-fonts udev usb vcd videos vorbis win32codecs wmf wxwindows xine xml xorg xosd xv xvid zlib elibc_glibc input_devices_mouse input_devices_keyboard kernel_linux linguas_de userland_GNU video_cards_radeon video_cards_vesa video_cards_fbdev" Unset: CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LDFLAGS, PORTAGE_RSYNC_EXTRA_OPTS
stable on ppc
1.) emerges fine on x86 QA Notice: the following files contain executable stacks Files with executable stacks will not work properly (or at all!) on some architectures/operating systems. A bug should be filed at http://bugs.gentoo.org/ to make sure the file is fixed. For more information, see http://hardened.gentoo.org/gnu-stack.xml Please include this file in your report: /var/tmp/portage/blas-atlas-3.7.11/temp/scanelf-execstack.log "RWX --- --- usr/lib/libatlas.so.0.0.0" 2.) passes collision-test emerge --info Portage 2.1-r2 (default-linux/x86/2006.1/desktop, gcc-4.1.1, glibc-2.4-r3, 2.6.18-rc6 i686) ================================================================= System uname: 2.6.18-rc6 i686 Genuine Intel(R) CPU T2300 @ 1.66GHz Gentoo Base System version 1.12.4 ccache version 2.3 [disabled] app-admin/eselect-compiler: [Not Present] dev-lang/python: 2.3.5-r2, 2.4.3-r1 dev-python/pycrypto: 2.0.1-r5 dev-util/ccache: 2.3 dev-util/confcache: [Not Present] sys-apps/sandbox: 1.2.17 sys-devel/autoconf: 2.13, 2.59-r7 sys-devel/automake: 1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2 sys-devel/binutils: 2.16.1-r3 sys-devel/gcc-config: 1.3.13-r3 sys-devel/libtool: 1.5.22 virtual/os-headers: 2.6.11-r5 ACCEPT_KEYWORDS="x86" AUTOCLEAN="yes" CBUILD="i686-pc-linux-gnu" CFLAGS="-Os -march=prescott -pipe -fomit-frame-pointer" CHOST="i686-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/share/X11/xkb /usr/share/config /usr/share/texmf/dvipdfm/config/ /usr/share/texmf/dvips/config/ /usr/share/texmf/tex/generic/config/ /usr/share/texmf/tex/platex/config/ /usr/share/texmf/xdvi/" CONFIG_PROTECT_MASK="/etc/env.d /etc/gconf /etc/revdep-rebuild /etc/terminfo" CXXFLAGS="-Os -march=prescott -pipe -fomit-frame-pointer" DISTDIR="/usr/portage/distfiles" FEATURES="autoconfig collision-protect distlocks metadata-transfer parallel-fetch sandbox sfperms strict test userfetch userpriv usersandbox" GENTOO_MIRRORS="http://distfiles.gentoo.org http://distro.ibiblio.org/pub/linux/distributions/gentoo" LINGUAS="en de en_GB de_CH" MAKEOPTS="-j3" PKGDIR="/usr/portage/packages" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --delete-after --stats --timeout=180 --exclude='/distfiles' --exclude='/local' --exclude='/packages'" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" SYNC="rsync://192.168.2.1/gentoo-portage" USE="x86 X acpi alsa asf avi berkdb bitmap-fonts cairo cdr cdrom cli crypt cups dbus divx dlloader dri dts dvd dvdr eds emboss encode fam ffmpeg firefox fortran gdbm gif gnome gpm gstreamer gtk hal ipv6 isdnlog java jpeg kde ldap libg++ mad mikmod mmx mono mp3 mpeg ncurses nls nptl nptlonly ogg opengl oss pam pcre pdflib perl png ppds pppd python qt3 qt4 quicktime readline reflection samba sdl session smp spell spl sse sse2 sse3 ssl svg tcpd tetex threads truetype truetype-fonts type1-fonts udev unicode vcd vorbis win32codecs xine xml xorg xprint xv xvid zlib elibc_glibc input_devices_keyboard input_devices_mouse kernel_linux linguas_en linguas_de linguas_en_GB linguas_de_CH userland_GNU video_cards_i810 video_cards_fbdev video_cards_vesa" Unset: CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, LDFLAGS, PORTAGE_RSYNC_EXTRA_OPTS, PORTDIR_OVERLAY
x86 stable.
